| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is aroH [H]
Identifier: 154247155
GI number: 154247155
Start: 3576204
End: 3577640
Strand: Direct
Name: aroH [H]
Synonym: Xaut_3227
Alternate gene names: 154247155
Gene position: 3576204-3577640 (Clockwise)
Preceding gene: 154247152
Following gene: 154247161
Centisome position: 67.36
GC content: 67.99
Gene sequence:
>1437_bases ATGGTGACCCGCCCGCAATCCGCTCCCGTCCCTGGCGCCGAGGCTTCTCGCCGCGCCGAAGGCTGGCGTCCGGATAGCTG GCGATTTTATCCCGGCGTGCAGATGCCCAATTATCCGGACAAGGCAGAACTCGCCGAGGTGGAAGCCAAGCTTGCCTCCT ACCCGCCCCTCGTCTTCGCCGGCGAGGCGCGCCGCCTGAAGGCGGAGATCGCCAAGGTCGCCCGCGGCGAAGCCTTCCTT TTGCAGGGCGGCGACTGCGCCGAGAGCTTCGACGAGCATTCGGCCGACAACATCCGCGATTTCTTCCGCGTCTTCCTGCA GATGGCGGTGGTGCTCACGTTCGCCGGCGGCTCGCCGGTGGTGAAGGTGGGCCGCATCGCCGGCCAGTTCGCCAAGCCGA GGTCTTCGGATACCGAGACCGAGAATGGCGTGACCCTGCCCAGCTACCGCGGCGACATCGTCAACGACATCGCCTTCACG GAAGCGGCCCGCGTGCCGGATCCGCGCCGGCAGATCGAGGCGTACCGCCAGTCGGCGGCCACCCTCAACCTGCTGCGCGC CTTCGCCAACGGCGGCTATGCCAACCTTGAGAACGCCCACCAGTGGATGCTGGGCTTCGTGAAGGACAGCCCCCAGTCCT CGCGCTACCAGGAACTCGCGAACCGCATCACCGAGGCGCTCGACTTCATGCGCGCCTGCGGGATCAATCCGCAGAGCCAC CCGGAAATGCGGACCACGGACTTCTTCACCAGCCACGAGGCGCTGCTGCTCGGCTACGAGCAGGCGCTGACGCGGGTGGA TTCCACCTCCGGCGACTGGTACGCCACCTCCGGCCACCTGTTGTGGATCGGCGACCGCACCCGCCAGCCGGACCATGCGC ATGTCGAGTATTTCCGCGGCATCCGCAATCCGATCGGCATCAAGTGCGGCCCCTCCATCACCGGGGACGGCCTCATCCGC CTCTTGGACATGCTGCAGCCCGACAATGAGCCGGGCCGCATCACCCTCATCTGCCGCTTCGGCGCCGACAAGGTGGGCGA CTACCTGCCGGGCCTGATCCGCGCGGTGGAGAAGGAGGGGCGCGTGGTGGCGTGGTCGTGCGATCCCATGCACGGCAACA CCATCAAGGCGGCGTCGGGCTACAAGACCCGGCCGTTCGAGCGCATCCAGTCGGAGATCCGCTCGTTCTTCGACATCCAT GCGGCCGAAGGCACCTTCGCCGGCGGCGTGCACCTGGAGATGACGGGCAAGAACGTCACCGAGTGCACCGGCGGCGCCCG CGCCATCTCGGACGAGGACCTGCGCGATCGCTACCACACCTATTGCGATCCGCGCCTCAACGCCGAGCAGGCCATCGAGA CCGCCTTCCTGGTGGCCGAGCTGCTGAAGCGCGAGCGCCTCGCCCGCGGCCGCCCGGAGGTGGTGGCGGCGGAGTGA
Upstream 100 bases:
>100_bases GTATAAGCCCGCCTTCCGGCCCCGCGAACACAAGAGGAACGCAAGGGCTGGACCCGGTGTCGGACGAGCCGGCCCGGTTT TTGAGAACATGGAGAGTGAA
Downstream 100 bases:
>100_bases TCCGCTTTACTGCAAGGTAGCGGCCGGCGACGGCCATGACGATCGGCGCCCCCGGGAGGATCTCCCGGGGGCGCTTTTTT GTGGGGTGGCGGGGGAGACC
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MVTRPQSAPVPGAEASRRAEGWRPDSWRFYPGVQMPNYPDKAELAEVEAKLASYPPLVFAGEARRLKAEIAKVARGEAFL LQGGDCAESFDEHSADNIRDFFRVFLQMAVVLTFAGGSPVVKVGRIAGQFAKPRSSDTETENGVTLPSYRGDIVNDIAFT EAARVPDPRRQIEAYRQSAATLNLLRAFANGGYANLENAHQWMLGFVKDSPQSSRYQELANRITEALDFMRACGINPQSH PEMRTTDFFTSHEALLLGYEQALTRVDSTSGDWYATSGHLLWIGDRTRQPDHAHVEYFRGIRNPIGIKCGPSITGDGLIR LLDMLQPDNEPGRITLICRFGADKVGDYLPGLIRAVEKEGRVVAWSCDPMHGNTIKAASGYKTRPFERIQSEIRSFFDIH AAEGTFAGGVHLEMTGKNVTECTGGARAISDEDLRDRYHTYCDPRLNAEQAIETAFLVAELLKRERLARGRPEVVAAE
Sequences:
>Translated_478_residues MVTRPQSAPVPGAEASRRAEGWRPDSWRFYPGVQMPNYPDKAELAEVEAKLASYPPLVFAGEARRLKAEIAKVARGEAFL LQGGDCAESFDEHSADNIRDFFRVFLQMAVVLTFAGGSPVVKVGRIAGQFAKPRSSDTETENGVTLPSYRGDIVNDIAFT EAARVPDPRRQIEAYRQSAATLNLLRAFANGGYANLENAHQWMLGFVKDSPQSSRYQELANRITEALDFMRACGINPQSH PEMRTTDFFTSHEALLLGYEQALTRVDSTSGDWYATSGHLLWIGDRTRQPDHAHVEYFRGIRNPIGIKCGPSITGDGLIR LLDMLQPDNEPGRITLICRFGADKVGDYLPGLIRAVEKEGRVVAWSCDPMHGNTIKAASGYKTRPFERIQSEIRSFFDIH AAEGTFAGGVHLEMTGKNVTECTGGARAISDEDLRDRYHTYCDPRLNAEQAIETAFLVAELLKRERLARGRPEVVAAE >Mature_478_residues MVTRPQSAPVPGAEASRRAEGWRPDSWRFYPGVQMPNYPDKAELAEVEAKLASYPPLVFAGEARRLKAEIAKVARGEAFL LQGGDCAESFDEHSADNIRDFFRVFLQMAVVLTFAGGSPVVKVGRIAGQFAKPRSSDTETENGVTLPSYRGDIVNDIAFT EAARVPDPRRQIEAYRQSAATLNLLRAFANGGYANLENAHQWMLGFVKDSPQSSRYQELANRITEALDFMRACGINPQSH PEMRTTDFFTSHEALLLGYEQALTRVDSTSGDWYATSGHLLWIGDRTRQPDHAHVEYFRGIRNPIGIKCGPSITGDGLIR LLDMLQPDNEPGRITLICRFGADKVGDYLPGLIRAVEKEGRVVAWSCDPMHGNTIKAASGYKTRPFERIQSEIRSFFDIH AAEGTFAGGVHLEMTGKNVTECTGGARAISDEDLRDRYHTYCDPRLNAEQAIETAFLVAELLKRERLARGRPEVVAAE
Specific function: Unknown
COG id: COG3200
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II DAHP synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002480 [H]
Pfam domain/function: PF01474 DAHP_synth_2 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 53012; Mature: 53012
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTRPQSAPVPGAEASRRAEGWRPDSWRFYPGVQMPNYPDKAELAEVEAKLASYPPLVFA CCCCCCCCCCCCCCHHHHCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEE GEARRLKAEIAKVARGEAFLLQGGDCAESFDEHSADNIRDFFRVFLQMAVVLTFAGGSPV CCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCH VKVGRIAGQFAKPRSSDTETENGVTLPSYRGDIVNDIAFTEAARVPDPRRQIEAYRQSAA HHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH TLNLLRAFANGGYANLENAHQWMLGFVKDSPQSSRYQELANRITEALDFMRACGINPQSH HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC PEMRTTDFFTSHEALLLGYEQALTRVDSTSGDWYATSGHLLWIGDRTRQPDHAHVEYFRG CCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCCCCHHHHHHHHH IRNPIGIKCGPSITGDGLIRLLDMLQPDNEPGRITLICRFGADKVGDYLPGLIRAVEKEG CCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCC RVVAWSCDPMHGNTIKAASGYKTRPFERIQSEIRSFFDIHAAEGTFAGGVHLEMTGKNVT CEEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCEEEEECCCCHH ECTGGARAISDEDLRDRYHTYCDPRLNAEQAIETAFLVAELLKRERLARGRPEVVAAE HHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC >Mature Secondary Structure MVTRPQSAPVPGAEASRRAEGWRPDSWRFYPGVQMPNYPDKAELAEVEAKLASYPPLVFA CCCCCCCCCCCCCCHHHHCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEE GEARRLKAEIAKVARGEAFLLQGGDCAESFDEHSADNIRDFFRVFLQMAVVLTFAGGSPV CCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCH VKVGRIAGQFAKPRSSDTETENGVTLPSYRGDIVNDIAFTEAARVPDPRRQIEAYRQSAA HHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH TLNLLRAFANGGYANLENAHQWMLGFVKDSPQSSRYQELANRITEALDFMRACGINPQSH HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC PEMRTTDFFTSHEALLLGYEQALTRVDSTSGDWYATSGHLLWIGDRTRQPDHAHVEYFRG CCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCCCCHHHHHHHHH IRNPIGIKCGPSITGDGLIRLLDMLQPDNEPGRITLICRFGADKVGDYLPGLIRAVEKEG CCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCC RVVAWSCDPMHGNTIKAASGYKTRPFERIQSEIRSFFDIHAAEGTFAGGVHLEMTGKNVT CEEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCEEEEECCCCHH ECTGGARAISDEDLRDRYHTYCDPRLNAEQAIETAFLVAELLKRERLARGRPEVVAAE HHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953; 8760910 [H]