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The map label for this gene is gph [H]

Identifier: 154247147

GI number: 154247147

Start: 3566700

End: 3567398

Strand: Reverse

Name: gph [H]

Synonym: Xaut_3219

Alternate gene names: 154247147

Gene position: 3567398-3566700 (Counterclockwise)

Preceding gene: 154247151

Following gene: 154247144

Centisome position: 67.2

GC content: 70.1

Gene sequence:

>699_bases
ATGACTGCCCCACCCGCTTCCACCCGTCCCGTCGTCGCCTTCGATCTCGACGGCACCCTGGTTGATACCGCGCCCGACCT
GCTGGACGCCCTCGACCTGGTCCTTGCCCCGCACAACATCCCGCCGGTGAACCGCGACGAGGCCCGCAACATGATCGGCG
GCGGCGCGCGCCTGCTCATCGTCCGCGCCCTGAAGAGCGAGGGCGTGGCCCTGCCCGATGCGGAGGTGGAAGCGATGACC
AAGCGCTTCATCGCCCATTATGCCGACAACATCGCCGTGGGCTCGCGCCCCTTCCCCGGCCTGCTCGAGGCCCTCGACCG
CCTCTCGGCCAAGGGCGTGAGCCTCGCCGTGTGCACCAACAAGCTGGAGCACCTCGCCCGGCTGCTGCTGGACGCGCTGG
ACCTCACCGAGCGTTTTTCGGTGATCACCGGTGCCGACACCTATCCGCGCTCCAAGCCGGACCCGCTGCCGCTGGTGTCC
ACCATCGCGGCGGCCGGAGGCTCTGCGGCGCAGGCGATCATGGTGGGCGACAGCATCACCGACGTGCTCACCGCCCGGGC
CACCGGCGTGCCCGTGGTCGCCGTGTCCTTCGGCTATACGGAAACCCCGGCCGCGGAACTCGGCGCGGACGCGCTGATCC
ACCATTTCGACGAGCTGGAGCGGGCGGTGGATGCCCTTCTGGCGCGTCCTGCTGCGTAG

Upstream 100 bases:

>100_bases
GATCGACGCGGACGCTCGCGCGAAAAAGCGGCAGGATTTAAGGCAGGTGGTGGGGTCGGCGCCCCCCATCCCCGTCTGTC
CCCGATGAAAAGGCCCGAAC

Downstream 100 bases:

>100_bases
AGCCCGCGCCGCCGGGATCGCACCAAGATCTGAGCGGATAGCGCGGCATCCCGGCTCCAGCCGGAGCGTGACCGACCGGG
CCGTTTGAGCCGATTTCCAT

Product: phosphoglycolate phosphatase

Products: NA

Alternate protein names: PGP; PGPase [H]

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MTAPPASTRPVVAFDLDGTLVDTAPDLLDALDLVLAPHNIPPVNRDEARNMIGGGARLLIVRALKSEGVALPDAEVEAMT
KRFIAHYADNIAVGSRPFPGLLEALDRLSAKGVSLAVCTNKLEHLARLLLDALDLTERFSVITGADTYPRSKPDPLPLVS
TIAAAGGSAAQAIMVGDSITDVLTARATGVPVVAVSFGYTETPAAELGADALIHHFDELERAVDALLARPAA

Sequences:

>Translated_232_residues
MTAPPASTRPVVAFDLDGTLVDTAPDLLDALDLVLAPHNIPPVNRDEARNMIGGGARLLIVRALKSEGVALPDAEVEAMT
KRFIAHYADNIAVGSRPFPGLLEALDRLSAKGVSLAVCTNKLEHLARLLLDALDLTERFSVITGADTYPRSKPDPLPLVS
TIAAAGGSAAQAIMVGDSITDVLTARATGVPVVAVSFGYTETPAAELGADALIHHFDELERAVDALLARPAA
>Mature_231_residues
TAPPASTRPVVAFDLDGTLVDTAPDLLDALDLVLAPHNIPPVNRDEARNMIGGGARLLIVRALKSEGVALPDAEVEAMTK
RFIAHYADNIAVGSRPFPGLLEALDRLSAKGVSLAVCTNKLEHLARLLLDALDLTERFSVITGADTYPRSKPDPLPLVST
IAAAGGSAAQAIMVGDSITDVLTARATGVPVVAVSFGYTETPAAELGADALIHHFDELERAVDALLARPAA

Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stres

COG id: COG0546

COG function: function code R; Predicted phosphatases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1789787, Length=221, Percent_Identity=33.9366515837104, Blast_Score=114, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR006346
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.1.3.18 [H]

Molecular weight: Translated: 24213; Mature: 24082

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPPASTRPVVAFDLDGTLVDTAPDLLDALDLVLAPHNIPPVNRDEARNMIGGGARLLI
CCCCCCCCCCEEEEECCCCCHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHH
VRALKSEGVALPDAEVEAMTKRFIAHYADNIAVGSRPFPGLLEALDRLSAKGVSLAVCTN
HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH
KLEHLARLLLDALDLTERFSVITGADTYPRSKPDPLPLVSTIAAAGGSAAQAIMVGDSIT
HHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHCCCCHHEEEEECCHHH
DVLTARATGVPVVAVSFGYTETPAAELGADALIHHFDELERAVDALLARPAA
HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TAPPASTRPVVAFDLDGTLVDTAPDLLDALDLVLAPHNIPPVNRDEARNMIGGGARLLI
CCCCCCCCCEEEEECCCCCHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHH
VRALKSEGVALPDAEVEAMTKRFIAHYADNIAVGSRPFPGLLEALDRLSAKGVSLAVCTN
HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHH
KLEHLARLLLDALDLTERFSVITGADTYPRSKPDPLPLVSTIAAAGGSAAQAIMVGDSIT
HHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHCCCCHHEEEEECCHHH
DVLTARATGVPVVAVSFGYTETPAAELGADALIHHFDELERAVDALLARPAA
HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]