| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154247151
Identifier: 154247151
GI number: 154247151
Start: 3569579
End: 3571768
Strand: Reverse
Name: 154247151
Synonym: Xaut_3223
Alternate gene names: NA
Gene position: 3571768-3569579 (Counterclockwise)
Preceding gene: 154247153
Following gene: 154247147
Centisome position: 67.28
GC content: 71.69
Gene sequence:
>2190_bases ATGCTGAACGACGTGATCCCGCCCCGGCCCCTGCGCGCCACGACCTCGGCACCGGGCACCGCGGCCTTTCTCCCGCCCCT CCTGCTGCGTCTGCCGGGTGCCGGCGGGGCGGTGGCGGTGCTGGTCGCCACGGGCGTCCCTGGCCCGCTGGTGGTGCGCA TGGAGGACGGGCGCGGGACGCCCCTCGCCAGCTTCCCGGCGGAGGCGGACACGCCGGTGGCGTCGGATCTGCCGGCCGGT ACGGCGCGGATCGTCGTCACCGGAGCGGGCGTATCGGAAGGCGCGGTGGGGCTCGGCTACTATCCCGTGCGCGGGCAGTT TCCTGCCGGGCGGCTGCTGCTGAAGCTCCATGCTTTCCGGAACGGGTCCTTCTCCACCCCCGAAGGCGGGCTGAAGGGCC TTCAGAGCCGCTGGCGTCAGGCGGAGGGCGCGGCGCGCCATCTGGGCCTAAGTCTCATCGCCCTCAGCCAGACCGCGCAG GCCCGCCTGTCCCTGAAGCGGGCGCAGTACCAGCGCTTCCGCGACGCCTTCGTGGAGGACTTCACCGAGGTTCCGGCAGA AGGGGCGGCGCCGGCCCTCGTGTTCCTGTCGGGGGCCGGGGACGGGCGCACGCTCAAGGAGATCGCCGCCTGCGCGCAGG CCCTGACGGCGCAGACCGACCGGGCGTTCAGCTGGATCGTCGCCGCAAGCGCGGACCGCCTGGCCCGCGACGGCGACAAG CTGGCGGAGGCGGTGGGCGATACCGGCCGCATCGTGCCCGCGCAGGGGACGGACGACGCCAGCTTGCTCAAGGCCGCCCT CGCCGCCAGCGCTGCGCCAGACGACGGCCTCATCTGCCTGCTGGACCTCGACGGCCGCCCCACGCGGGACGCCGTGGCCC TCATCCGCGCAGCGTTTGCGGCCCATCCCGACTGCCAGTTGCTCTATACCGACGAGGAGCGCTGCGACGCGTCCGGCACG CCGCTGGCGGGCGTGTTCAAGCCGGCCTTCAATCGCCACCTGCTGGAAGCCTCGCCCTATATGGGCGCGCTCACCGTGCT GCGGGCGGGGCGGACCCGGGCACTGGGGATCGATCCCGGCTTCGGCGCCGCCGCCCCCTATCACCTCATCGTGCGCACGG TGGCCGAGGTCAGCGCCGGTACGGTGCGGCACCTGCCGCGCATCGCCTATTCCGGCCCGGAGAAGGCGCCGGGCTTCGTC GCGCCTGAAACCGCCCGGCTGGCCGCGCAGGCGCTCGAAGGCGTGCTCAACGTGCCGGTCAGCGTGGTGCCGGAGGCCGG GACCCATTTCCTGCGGCCGGATTTCCCCCTGCCGGCGGTGCCGCCCAAGGTGTCCATCGTCATCCCCACCCGCGACCGCG CCGGCCTTCTGGGCATGGCGCTCGATTCGCTGATCGGGAAGACGGCCTATCGCAATTTCGAGATCATCATCGTGGACAAC GGCTCGGTGGAGCCGGAGACCTTCGCCCTGTTCGCGGAGATGAAGGCCACATGGCCCGACACGACCATCGTGCGCGACGA TGGCGACTTCAATTATCCGCGCATCTGCAACAACGGGGTCGCGGCCGCTACCGGCGACCTGATCCTGTTCCTCAACAACG ACATCGAGGTGATCGAGGCGGGCTGGCTCGGCGAGATGGTGGCGCTCGCCTTACGGCCGGGCGTCGGCATCGTGGGGGCC AAGCTGCTCTATCCCGATCGTACCATCCAGCATGCGGGGGTGATGGTCGGCCTGTTCGGCTATGCCTCCCACTGGTTCGC CCATGCCCTGCCGGACACGCCCGGCCCCGAGGGCCGGCTGCTGGCGCGGCAGGACGTGTCGGCGGTCACCGGCGCCTGCC AGCTCATCCGCAGGGACGTGTGGGACGCCATCGGCCCGCTGGATGCGGAGCGGTTCCAGGAGGATTGCAACGACATCGAC CTGTGCCTGCGCGCCCGCCGCGCCGGCTATGAGGTGGTGACCACGCCGTACGCGCTGCTCATCCACCACGAATCGGCCTC GCGGGGGAAGGCCCGCAACAAGCTCCACCGCGAACGGCTGAAGGCCCAGCACGCGCGCTTCGACGCGCTGTGGCACGCCA CCACGCTGGTGGACCCTCACTCCAACCCCAACCTCGACCGCAAGAACCTGTTCGCGGCGCTGGCCGACGCGCCGCAGGGC TCGCGCGACGCCCGCACCGACGCGATCTGA
Upstream 100 bases:
>100_bases GGGAAAGCCACGGTCGTGCCCCATGCGCCGGGGCCCAGGCCGGACGGATCGCCCGGCGGCCTGAGCCGGAACAAGCCGCG AAGGGGCGGGACCACATCCC
Downstream 100 bases:
>100_bases GGCCCCCCAAAACGAAAAGGCTCCCGGCCGGCGCCGGGAGCCTTTTCCTGAGCCCGAGCCAGCCCGTGCGACCTACAGGT CGACGCCGCGCTTGCGCATT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 729; Mature: 729
Protein sequence:
>729_residues MLNDVIPPRPLRATTSAPGTAAFLPPLLLRLPGAGGAVAVLVATGVPGPLVVRMEDGRGTPLASFPAEADTPVASDLPAG TARIVVTGAGVSEGAVGLGYYPVRGQFPAGRLLLKLHAFRNGSFSTPEGGLKGLQSRWRQAEGAARHLGLSLIALSQTAQ ARLSLKRAQYQRFRDAFVEDFTEVPAEGAAPALVFLSGAGDGRTLKEIAACAQALTAQTDRAFSWIVAASADRLARDGDK LAEAVGDTGRIVPAQGTDDASLLKAALAASAAPDDGLICLLDLDGRPTRDAVALIRAAFAAHPDCQLLYTDEERCDASGT PLAGVFKPAFNRHLLEASPYMGALTVLRAGRTRALGIDPGFGAAAPYHLIVRTVAEVSAGTVRHLPRIAYSGPEKAPGFV APETARLAAQALEGVLNVPVSVVPEAGTHFLRPDFPLPAVPPKVSIVIPTRDRAGLLGMALDSLIGKTAYRNFEIIIVDN GSVEPETFALFAEMKATWPDTTIVRDDGDFNYPRICNNGVAAATGDLILFLNNDIEVIEAGWLGEMVALALRPGVGIVGA KLLYPDRTIQHAGVMVGLFGYASHWFAHALPDTPGPEGRLLARQDVSAVTGACQLIRRDVWDAIGPLDAERFQEDCNDID LCLRARRAGYEVVTTPYALLIHHESASRGKARNKLHRERLKAQHARFDALWHATTLVDPHSNPNLDRKNLFAALADAPQG SRDARTDAI
Sequences:
>Translated_729_residues MLNDVIPPRPLRATTSAPGTAAFLPPLLLRLPGAGGAVAVLVATGVPGPLVVRMEDGRGTPLASFPAEADTPVASDLPAG TARIVVTGAGVSEGAVGLGYYPVRGQFPAGRLLLKLHAFRNGSFSTPEGGLKGLQSRWRQAEGAARHLGLSLIALSQTAQ ARLSLKRAQYQRFRDAFVEDFTEVPAEGAAPALVFLSGAGDGRTLKEIAACAQALTAQTDRAFSWIVAASADRLARDGDK LAEAVGDTGRIVPAQGTDDASLLKAALAASAAPDDGLICLLDLDGRPTRDAVALIRAAFAAHPDCQLLYTDEERCDASGT PLAGVFKPAFNRHLLEASPYMGALTVLRAGRTRALGIDPGFGAAAPYHLIVRTVAEVSAGTVRHLPRIAYSGPEKAPGFV APETARLAAQALEGVLNVPVSVVPEAGTHFLRPDFPLPAVPPKVSIVIPTRDRAGLLGMALDSLIGKTAYRNFEIIIVDN GSVEPETFALFAEMKATWPDTTIVRDDGDFNYPRICNNGVAAATGDLILFLNNDIEVIEAGWLGEMVALALRPGVGIVGA KLLYPDRTIQHAGVMVGLFGYASHWFAHALPDTPGPEGRLLARQDVSAVTGACQLIRRDVWDAIGPLDAERFQEDCNDID LCLRARRAGYEVVTTPYALLIHHESASRGKARNKLHRERLKAQHARFDALWHATTLVDPHSNPNLDRKNLFAALADAPQG SRDARTDAI >Mature_729_residues MLNDVIPPRPLRATTSAPGTAAFLPPLLLRLPGAGGAVAVLVATGVPGPLVVRMEDGRGTPLASFPAEADTPVASDLPAG TARIVVTGAGVSEGAVGLGYYPVRGQFPAGRLLLKLHAFRNGSFSTPEGGLKGLQSRWRQAEGAARHLGLSLIALSQTAQ ARLSLKRAQYQRFRDAFVEDFTEVPAEGAAPALVFLSGAGDGRTLKEIAACAQALTAQTDRAFSWIVAASADRLARDGDK LAEAVGDTGRIVPAQGTDDASLLKAALAASAAPDDGLICLLDLDGRPTRDAVALIRAAFAAHPDCQLLYTDEERCDASGT PLAGVFKPAFNRHLLEASPYMGALTVLRAGRTRALGIDPGFGAAAPYHLIVRTVAEVSAGTVRHLPRIAYSGPEKAPGFV APETARLAAQALEGVLNVPVSVVPEAGTHFLRPDFPLPAVPPKVSIVIPTRDRAGLLGMALDSLIGKTAYRNFEIIIVDN GSVEPETFALFAEMKATWPDTTIVRDDGDFNYPRICNNGVAAATGDLILFLNNDIEVIEAGWLGEMVALALRPGVGIVGA KLLYPDRTIQHAGVMVGLFGYASHWFAHALPDTPGPEGRLLARQDVSAVTGACQLIRRDVWDAIGPLDAERFQEDCNDID LCLRARRAGYEVVTTPYALLIHHESASRGKARNKLHRERLKAQHARFDALWHATTLVDPHSNPNLDRKNLFAALADAPQG SRDARTDAI
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 77256; Mature: 77256
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNDVIPPRPLRATTSAPGTAAFLPPLLLRLPGAGGAVAVLVATGVPGPLVVRMEDGRGT CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEECCCCC PLASFPAEADTPVASDLPAGTARIVVTGAGVSEGAVGLGYYPVRGQFPAGRLLLKLHAFR CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEECCEECCCCCCCHHHEEEEEEHHC NGSFSTPEGGLKGLQSRWRQAEGAARHLGLSLIALSQTAQARLSLKRAQYQRFRDAFVED CCCCCCCCHHHHHHHHHHHHHCCHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH FTEVPAEGAAPALVFLSGAGDGRTLKEIAACAQALTAQTDRAFSWIVAASADRLARDGDK HHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHEEEEEECCHHHHHCCHHH LAEAVGDTGRIVPAQGTDDASLLKAALAASAAPDDGLICLLDLDGRPTRDAVALIRAAFA HHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH AHPDCQLLYTDEERCDASGTPLAGVFKPAFNRHLLEASPYMGALTVLRAGRTRALGIDPG CCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEECCCC FGAAAPYHLIVRTVAEVSAGTVRHLPRIAYSGPEKAPGFVAPETARLAAQALEGVLNVPV CCCCCHHHHHHHHHHHHHCHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC SVVPEAGTHFLRPDFPLPAVPPKVSIVIPTRDRAGLLGMALDSLIGKTAYRNFEIIIVDN EEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEEEC GSVEPETFALFAEMKATWPDTTIVRDDGDFNYPRICNNGVAAATGDLILFLNNDIEVIEA CCCCHHHHEEEEHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEC GWLGEMVALALRPGVGIVGAKLLYPDRTIQHAGVMVGLFGYASHWFAHALPDTPGPEGRL CHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE LARQDVSAVTGACQLIRRDVWDAIGPLDAERFQEDCNDIDLCLRARRAGYEVVTTPYALL EEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCEEEECCEEEE IHHESASRGKARNKLHRERLKAQHARFDALWHATTLVDPHSNPNLDRKNLFAALADAPQG EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHCCCCC SRDARTDAI CCCCCCCCC >Mature Secondary Structure MLNDVIPPRPLRATTSAPGTAAFLPPLLLRLPGAGGAVAVLVATGVPGPLVVRMEDGRGT CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEECCCCC PLASFPAEADTPVASDLPAGTARIVVTGAGVSEGAVGLGYYPVRGQFPAGRLLLKLHAFR CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEECCEECCCCCCCHHHEEEEEEHHC NGSFSTPEGGLKGLQSRWRQAEGAARHLGLSLIALSQTAQARLSLKRAQYQRFRDAFVED CCCCCCCCHHHHHHHHHHHHHCCHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH FTEVPAEGAAPALVFLSGAGDGRTLKEIAACAQALTAQTDRAFSWIVAASADRLARDGDK HHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHEEEEEECCHHHHHCCHHH LAEAVGDTGRIVPAQGTDDASLLKAALAASAAPDDGLICLLDLDGRPTRDAVALIRAAFA HHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH AHPDCQLLYTDEERCDASGTPLAGVFKPAFNRHLLEASPYMGALTVLRAGRTRALGIDPG CCCCCEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEECCCC FGAAAPYHLIVRTVAEVSAGTVRHLPRIAYSGPEKAPGFVAPETARLAAQALEGVLNVPV CCCCCHHHHHHHHHHHHHCHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC SVVPEAGTHFLRPDFPLPAVPPKVSIVIPTRDRAGLLGMALDSLIGKTAYRNFEIIIVDN EEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEEEC GSVEPETFALFAEMKATWPDTTIVRDDGDFNYPRICNNGVAAATGDLILFLNNDIEVIEA CCCCHHHHEEEEHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEC GWLGEMVALALRPGVGIVGAKLLYPDRTIQHAGVMVGLFGYASHWFAHALPDTPGPEGRL CHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE LARQDVSAVTGACQLIRRDVWDAIGPLDAERFQEDCNDIDLCLRARRAGYEVVTTPYALL EEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCEEEECCEEEE IHHESASRGKARNKLHRERLKAQHARFDALWHATTLVDPHSNPNLDRKNLFAALADAPQG EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHCCCCC SRDARTDAI CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]