| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154247086
Identifier: 154247086
GI number: 154247086
Start: 3505063
End: 3505812
Strand: Reverse
Name: 154247086
Synonym: Xaut_3157
Alternate gene names: NA
Gene position: 3505812-3505063 (Counterclockwise)
Preceding gene: 154247094
Following gene: 154247085
Centisome position: 66.04
GC content: 74.53
Gene sequence:
>750_bases ATGATCGCCCCACGCCTTCCCGTCCTCGCGCTGGTCGCGATCCTTCTTGCGCCAGGCGCGGCACAGGCCATCATGGGCGG CGGGCCGGCGGCGGCGGAGGTGGCGGCGCAGACGGTGCTCATCGTCTCCACCCGCGGCGCCTCCTGCACCGGCGCGGTAC TGGCGCCCGATCTCGTGCTCACCGCCGCCCATTGCGTGGCGCCGGCGTCGGACTATGCGGTGGCCATCATCGGCGACGGA CCGCCGAAGCTCGTGCCGGCCAAGCGCATCGCCGTGCATCCGCGCTTCGATGCCGGCCAGTTCCAGATCCACCGGCCGAC CCCCGACCTCGCCCTTGTGAAGCTTGCAGAACCCCTGCCCGGCCGCTTCCGCACCGCGCGGCTCGCCAGCGCCGACGGCC TGCCCGAGAAGGGCACCCCCTTCCTGCTCGCCGGCTATGGCGTCGTTGCCGACGGCCAGGGCAAGAGCGCCGGCACGCTG CGCACGGTGGCGCTGTCCTCCATCGGCATCACCGGCGGCATCATGGTGCGCCTCTCGGCGCCGGAGGGCGCGGCCGGCGC CTGCACCGGAGATTCAGGCGGCCCCGCCTTCCGTGACGGGGCGGTGGCGGGCGTCACTGGCTGGGCCACCGGGCCGGGGG GCAGCCGCGGCTGCGGCGGCGTCACCGGCGTGACCCTGGTGTCGCTCCATCGCGACTGGATCGAGGCCACCGCGAAGAGC CTCGGCAGCCCGCTCGGCAGCGGGAGATAG
Upstream 100 bases:
>100_bases TCCGACGCGCTGTGACACAGGCGCATCGCCCCGCGCGGAAAGGAAATTCCCGGCCCTGCCCGCCATTGACGCACCGGGCG GCGGGCGGCAGAAACGGGAG
Downstream 100 bases:
>100_bases GGATGGCACCGGCCGCATCGCCCCGTTTTAGGCGCGCCGGCCGGATCATCGCTGCTGCCGTGCTCGCCCTTCTCGGCGCC GGGCCGGCCTTCGGCCAGAG
Product: peptidase S1 and S6 chymotrypsin/Hap
Products: NA
Alternate protein names: Serine Protease; Trypsin Domain Lipoprotein; Peptidase; Secreted Trypsin-Like Serine Protease
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MIAPRLPVLALVAILLAPGAAQAIMGGGPAAAEVAAQTVLIVSTRGASCTGAVLAPDLVLTAAHCVAPASDYAVAIIGDG PPKLVPAKRIAVHPRFDAGQFQIHRPTPDLALVKLAEPLPGRFRTARLASADGLPEKGTPFLLAGYGVVADGQGKSAGTL RTVALSSIGITGGIMVRLSAPEGAAGACTGDSGGPAFRDGAVAGVTGWATGPGGSRGCGGVTGVTLVSLHRDWIEATAKS LGSPLGSGR
Sequences:
>Translated_249_residues MIAPRLPVLALVAILLAPGAAQAIMGGGPAAAEVAAQTVLIVSTRGASCTGAVLAPDLVLTAAHCVAPASDYAVAIIGDG PPKLVPAKRIAVHPRFDAGQFQIHRPTPDLALVKLAEPLPGRFRTARLASADGLPEKGTPFLLAGYGVVADGQGKSAGTL RTVALSSIGITGGIMVRLSAPEGAAGACTGDSGGPAFRDGAVAGVTGWATGPGGSRGCGGVTGVTLVSLHRDWIEATAKS LGSPLGSGR >Mature_249_residues MIAPRLPVLALVAILLAPGAAQAIMGGGPAAAEVAAQTVLIVSTRGASCTGAVLAPDLVLTAAHCVAPASDYAVAIIGDG PPKLVPAKRIAVHPRFDAGQFQIHRPTPDLALVKLAEPLPGRFRTARLASADGLPEKGTPFLLAGYGVVADGQGKSAGTL RTVALSSIGITGGIMVRLSAPEGAAGACTGDSGGPAFRDGAVAGVTGWATGPGGSRGCGGVTGVTLVSLHRDWIEATAKS LGSPLGSGR
Specific function: Unknown
COG id: COG5640
COG function: function code O; Secreted trypsin-like serine protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21464127, Length=236, Percent_Identity=25.8474576271186, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI6005844, Length=236, Percent_Identity=25.8474576271186, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI209862865, Length=221, Percent_Identity=29.4117647058824, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI5803199, Length=221, Percent_Identity=29.4117647058824, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI21618357, Length=221, Percent_Identity=29.4117647058824, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI145701030, Length=235, Percent_Identity=28.936170212766, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI291167775, Length=234, Percent_Identity=29.0598290598291, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI291167777, Length=234, Percent_Identity=29.0598290598291, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI15451940, Length=234, Percent_Identity=29.0598290598291, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI20302143, Length=245, Percent_Identity=27.3469387755102, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI89142741, Length=241, Percent_Identity=24.896265560166, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24582982, Length=213, Percent_Identity=32.8638497652582, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI24653960, Length=244, Percent_Identity=27.8688524590164, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24645302, Length=276, Percent_Identity=26.4492753623188, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI21357323, Length=186, Percent_Identity=29.0322580645161, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24473; Mature: 24473
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: PS00134 TRYPSIN_HIS ; PS50240 TRYPSIN_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAPRLPVLALVAILLAPGAAQAIMGGGPAAAEVAAQTVLIVSTRGASCTGAVLAPDLVL CCCCCCHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHEEEEEEEECCCCCCCCHHHHHHHH TAAHCVAPASDYAVAIIGDGPPKLVPAKRIAVHPRFDAGQFQIHRPTPDLALVKLAEPLP HHHHHHCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCEEEECCCCCEEEEEECCCCC GRFRTARLASADGLPEKGTPFLLAGYGVVADGQGKSAGTLRTVALSSIGITGGIMVRLSA CCHHEEEECCCCCCCCCCCCEEEECCEEEECCCCCCCCEEEEEEHHHCCCCCEEEEEEEC PEGAAGACTGDSGGPAFRDGAVAGVTGWATGPGGSRGCGGVTGVTLVSLHRDWIEATAKS CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LGSPLGSGR HCCCCCCCC >Mature Secondary Structure MIAPRLPVLALVAILLAPGAAQAIMGGGPAAAEVAAQTVLIVSTRGASCTGAVLAPDLVL CCCCCCHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHEEEEEEEECCCCCCCCHHHHHHHH TAAHCVAPASDYAVAIIGDGPPKLVPAKRIAVHPRFDAGQFQIHRPTPDLALVKLAEPLP HHHHHHCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCEEEECCCCCEEEEEECCCCC GRFRTARLASADGLPEKGTPFLLAGYGVVADGQGKSAGTLRTVALSSIGITGGIMVRLSA CCHHEEEECCCCCCCCCCCCEEEECCEEEECCCCCCCCEEEEEEHHHCCCCCEEEEEEEC PEGAAGACTGDSGGPAFRDGAVAGVTGWATGPGGSRGCGGVTGVTLVSLHRDWIEATAKS CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LGSPLGSGR HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA