| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is ubiG [H]
Identifier: 154247015
GI number: 154247015
Start: 3427855
End: 3428598
Strand: Direct
Name: ubiG [H]
Synonym: Xaut_3086
Alternate gene names: 154247015
Gene position: 3427855-3428598 (Clockwise)
Preceding gene: 154247014
Following gene: 154247021
Centisome position: 64.57
GC content: 69.62
Gene sequence:
>744_bases ATGTCGCAGATGAACGCCACCGTCGATCCGGCCGAGGTCGCCCGCTTCGATGCCTTGGGCGCGCAGTGGTGGGACGAGAA GGGCAAGATGGCGCCGCTCCACGCCATGAACCCGGCGCGGCTTGCTTTCCTGCGCGACGCGCTGGTGCGCCATTTCAGCC GTGATGCGCGTGCCCTGCGGCCCCTGAAGGGCCTTTCCATCCTCGACATCGGCTGCGGCGGCGGCCTGCTCAGCGAGCCG CTGGCGCGCATGGGCGGGCAGGTGCGCGGCATCGATCCCGCCCCGGGCAATGTGGAGATCGCCCGTGCGCATGCGGCGGC CTCCGGCCTTGCCGTCGACTATGAGGCGGTCACCGCCGAGGAATTGGCGTCCCGCGGCGACCGCTTCGACGTGGTGGTGG CGCTGGAGGTGGTGGAGCACGTGGCGGACGTGGGCCTGTTCGTGCGCACCGCCGGGCAATTGGTGACGGACGGCGGCGTG CTGGTGCTCTCCACCCTCAACCGCACCGCCAAGAGCTTCGCCCTCGCCATCGTTGGGGCCGAATATGTGCTGCGCTGGCT GCCGCCGGGCACCCATCGCTGGGAGAAGTTCATCACTCCCGAGGAGCTGGAGGCGACCCTCGCCGCCGCCGGCTTCGCCG CGCAGGAGAAGGTGGGCCTCGCCTACGAGCCGCTCAGCGGGGATTTCCACCTGACCGAGGATCTTTCGGTGAACTATTTC ATGGTGGCGGAGCGGGTCGGCTAG
Upstream 100 bases:
>100_bases CCTGGTGCGCGGCTGAGCCGGGGCGGCGCACCGCCGCCTTGCTCCCTCCGCGCCTCCCGCCTAATGCTGGGGGCGAAACG GCGTCTGCCGAGGAGGCCCC
Downstream 100 bases:
>100_bases GCCGGATTTTCGGAACGAGACCGCGCCTCAGTTGCGGTCTTCCGGCAGCACGGGCAGGGGCAGCACCTCCACGTCGTCCT CGCGCAGGGCCTTGACCTCT
Product: ubiquinone biosynthesis O-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSQMNATVDPAEVARFDALGAQWWDEKGKMAPLHAMNPARLAFLRDALVRHFSRDARALRPLKGLSILDIGCGGGLLSEP LARMGGQVRGIDPAPGNVEIARAHAAASGLAVDYEAVTAEELASRGDRFDVVVALEVVEHVADVGLFVRTAGQLVTDGGV LVLSTLNRTAKSFALAIVGAEYVLRWLPPGTHRWEKFITPEELEATLAAAGFAAQEKVGLAYEPLSGDFHLTEDLSVNYF MVAERVG
Sequences:
>Translated_247_residues MSQMNATVDPAEVARFDALGAQWWDEKGKMAPLHAMNPARLAFLRDALVRHFSRDARALRPLKGLSILDIGCGGGLLSEP LARMGGQVRGIDPAPGNVEIARAHAAASGLAVDYEAVTAEELASRGDRFDVVVALEVVEHVADVGLFVRTAGQLVTDGGV LVLSTLNRTAKSFALAIVGAEYVLRWLPPGTHRWEKFITPEELEATLAAAGFAAQEKVGLAYEPLSGDFHLTEDLSVNYF MVAERVG >Mature_246_residues SQMNATVDPAEVARFDALGAQWWDEKGKMAPLHAMNPARLAFLRDALVRHFSRDARALRPLKGLSILDIGCGGGLLSEPL ARMGGQVRGIDPAPGNVEIARAHAAASGLAVDYEAVTAEELASRGDRFDVVVALEVVEHVADVGLFVRTAGQLVTDGGVL VLSTLNRTAKSFALAIVGAEYVLRWLPPGTHRWEKFITPEELEATLAAAGFAAQEKVGLAYEPLSGDFHLTEDLSVNYFM VAERVG
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]
Homologues:
Organism=Homo sapiens, GI118600965, Length=251, Percent_Identity=43.4262948207171, Blast_Score=219, Evalue=2e-57, Organism=Escherichia coli, GI1788564, Length=241, Percent_Identity=40.6639004149378, Blast_Score=187, Evalue=4e-49, Organism=Caenorhabditis elegans, GI115533050, Length=246, Percent_Identity=36.5853658536585, Blast_Score=138, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6324476, Length=277, Percent_Identity=29.6028880866426, Blast_Score=111, Evalue=1e-25, Organism=Drosophila melanogaster, GI24585589, Length=224, Percent_Identity=34.375, Blast_Score=133, Evalue=1e-31, Organism=Drosophila melanogaster, GI281365311, Length=241, Percent_Identity=32.3651452282158, Blast_Score=131, Evalue=3e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 26475; Mature: 26343
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQMNATVDPAEVARFDALGAQWWDEKGKMAPLHAMNPARLAFLRDALVRHFSRDARALR CCCCCCCCCHHHHHHHHHHCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH PLKGLSILDIGCGGGLLSEPLARMGGQVRGIDPAPGNVEIARAHAAASGLAVDYEAVTAE HCCCCEEEEECCCCCHHHHHHHHHCCEEECCCCCCCCEEEEEHHHHHCCCEEEHHHHHHH ELASRGDRFDVVVALEVVEHVADVGLFVRTAGQLVTDGGVLVLSTLNRTAKSFALAIVGA HHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEHHHHHHHHHHHHHHHH EYVLRWLPPGTHRWEKFITPEELEATLAAAGFAAQEKVGLAYEPLSGDFHLTEDLSVNYF HHHHHHCCCCCHHHHHCCCHHHHHHHHHHHCCHHHHCCCEEECCCCCCEEEECCCCCEEE MVAERVG EEEEECC >Mature Secondary Structure SQMNATVDPAEVARFDALGAQWWDEKGKMAPLHAMNPARLAFLRDALVRHFSRDARALR CCCCCCCCHHHHHHHHHHCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH PLKGLSILDIGCGGGLLSEPLARMGGQVRGIDPAPGNVEIARAHAAASGLAVDYEAVTAE HCCCCEEEEECCCCCHHHHHHHHHCCEEECCCCCCCCEEEEEHHHHHCCCEEEHHHHHHH ELASRGDRFDVVVALEVVEHVADVGLFVRTAGQLVTDGGVLVLSTLNRTAKSFALAIVGA HHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEHHHHHHHHHHHHHHHH EYVLRWLPPGTHRWEKFITPEELEATLAAAGFAAQEKVGLAYEPLSGDFHLTEDLSVNYF HHHHHHCCCCCHHHHHCCCHHHHHHHHHHHCCHHHHCCCEEECCCCCCEEEECCCCCEEE MVAERVG EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA