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The map label for this gene is ybeQ [H]

Identifier: 154247008

GI number: 154247008

Start: 3418453

End: 3419607

Strand: Direct

Name: ybeQ [H]

Synonym: Xaut_3079

Alternate gene names: 154247008

Gene position: 3418453-3419607 (Clockwise)

Preceding gene: 154247007

Following gene: 154247009

Centisome position: 64.39

GC content: 69.96

Gene sequence:

>1155_bases
ATGAGCATGGGTCAGGTCCGGCGCGTTTCGACGGCGTCTGCGCGGGGAATGGCGCGCGTCTGCGCCCTGAACCTCGCGCT
GGTCCTTGCGCTGGTGGGCGCGCCGGCCCTCGCCCAGACCGCTGCACAGCCCAAACCCTCGGACAAGCCCTCATCCGAAA
AGCCGGCGAAGCCCGCTGCCAAGCCTGCCGCCAAACCCGCCGAAAAGCCTGCGGCCAAACCCACCAATAAGCCGGGCGCG
CCGCGTCCCGACGCGGGGGGCGGGCCGCCGCTGCTAGGGCAGCAGATCTCTTATCCCAGCCTCGATACGCCGGGCGGCAG
CGGCGATCTTGCCTATGGCGCCTACCAGCGCGGCTATTACCTTTCCGCCTTCAACGAGGCGCTGAAGCGGGCTCGCGCCG
GAACCGACCCGGCCGCCATGACCCTGCTGGGCGACCTCTACGGCTCCGGCTATGGCGTGCCGCTGGATTTCTCCAAGGCC
ATCGAATGGTATCGCAAGGCCGCGGCCGCAGGCTCGCCGGGCGCGCTCCTCTCCCTCGGCAACCTGACGCTGGCCGGGCA
GGGCCTGAAGAAGGACGAGCTGGAAGCCGCCAGGCTGTTCCGCGAGGCGGCGGAAAAGGGCAATGGGCCTGCCGCCTACA
ATCTCGGACTGCTCTATCTCCAGGGCCGCCAGATCCCGAAGGAGCCGACGGAAGCCGCGCGCTGGTTCGAAGTGGCGGCC
GGCAAGGATATCGAGGATGCCCAATATGCCCTCGCCGTGCTGCTCAAGGAGGGCAACGGCGTGGAGAAGGACGTGGCCCA
ATCGGCGCAGCTGATGGCGTCCGCCGCGCGGCTTGGCCACATCACGGCGCAGGTGGAGTTCGCCATCATGCAGTTCAACG
GCGTGGGCGTGCCTAAGGACGAGGCGGCCGCCGCCGCCATGTTCCGCAAGGCGGCGCTGGGTGGCAATGCCATCGCCCAG
AACCGCTATGCGCGGCTGCTCGCGGTGGGGCGCGGGGTGTCGCAGGACAAGACCCAGGCCGCCGCGTGGCACCTGCTCGC
CAAGCATCGCGGGCTCGGCGATCCCATGCTGGACGAGGTGCTGGAGAAGCTGCCCGCCGCCGACCGCAAGAAGGCGGAGG
CACAGGCGGCCCGCTGGGAAGCCGGCCGCGCCTGA

Upstream 100 bases:

>100_bases
GCGCCGATTTCGTCGCGCTGGCCGAGGCGCTGGTGGCGGACGGCGGCGCGGCGACGGTGACGGCGGCCATGGACCGCCTT
TCGCGCGTGGACGCCCAGCC

Downstream 100 bases:

>100_bases
CACGGAATGGGCGATTGCGGCACTTGCGAGTGTGGCACTTGTGCAACGCCTGCCAGCCTCGTCGGTCTGCCCCGAGCCCT
GCACCTGCTCGCCATGATGA

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MSMGQVRRVSTASARGMARVCALNLALVLALVGAPALAQTAAQPKPSDKPSSEKPAKPAAKPAAKPAEKPAAKPTNKPGA
PRPDAGGGPPLLGQQISYPSLDTPGGSGDLAYGAYQRGYYLSAFNEALKRARAGTDPAAMTLLGDLYGSGYGVPLDFSKA
IEWYRKAAAAGSPGALLSLGNLTLAGQGLKKDELEAARLFREAAEKGNGPAAYNLGLLYLQGRQIPKEPTEAARWFEVAA
GKDIEDAQYALAVLLKEGNGVEKDVAQSAQLMASAARLGHITAQVEFAIMQFNGVGVPKDEAAAAAMFRKAALGGNAIAQ
NRYARLLAVGRGVSQDKTQAAAWHLLAKHRGLGDPMLDEVLEKLPAADRKKAEAQAARWEAGRA

Sequences:

>Translated_384_residues
MSMGQVRRVSTASARGMARVCALNLALVLALVGAPALAQTAAQPKPSDKPSSEKPAKPAAKPAAKPAEKPAAKPTNKPGA
PRPDAGGGPPLLGQQISYPSLDTPGGSGDLAYGAYQRGYYLSAFNEALKRARAGTDPAAMTLLGDLYGSGYGVPLDFSKA
IEWYRKAAAAGSPGALLSLGNLTLAGQGLKKDELEAARLFREAAEKGNGPAAYNLGLLYLQGRQIPKEPTEAARWFEVAA
GKDIEDAQYALAVLLKEGNGVEKDVAQSAQLMASAARLGHITAQVEFAIMQFNGVGVPKDEAAAAAMFRKAALGGNAIAQ
NRYARLLAVGRGVSQDKTQAAAWHLLAKHRGLGDPMLDEVLEKLPAADRKKAEAQAARWEAGRA
>Mature_383_residues
SMGQVRRVSTASARGMARVCALNLALVLALVGAPALAQTAAQPKPSDKPSSEKPAKPAAKPAAKPAEKPAAKPTNKPGAP
RPDAGGGPPLLGQQISYPSLDTPGGSGDLAYGAYQRGYYLSAFNEALKRARAGTDPAAMTLLGDLYGSGYGVPLDFSKAI
EWYRKAAAAGSPGALLSLGNLTLAGQGLKKDELEAARLFREAAEKGNGPAAYNLGLLYLQGRQIPKEPTEAARWFEVAAG
KDIEDAQYALAVLLKEGNGVEKDVAQSAQLMASAARLGHITAQVEFAIMQFNGVGVPKDEAAAAAMFRKAALGGNAIAQN
RYARLLAVGRGVSQDKTQAAAWHLLAKHRGLGDPMLDEVLEKLPAADRKKAEAQAARWEAGRA

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI151301150, Length=176, Percent_Identity=31.8181818181818, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI33620759, Length=278, Percent_Identity=29.136690647482, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI19923669, Length=179, Percent_Identity=30.1675977653631, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI87081769, Length=230, Percent_Identity=32.6086956521739, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1786867, Length=113, Percent_Identity=37.1681415929204, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17563256, Length=224, Percent_Identity=28.125, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21355295, Length=172, Percent_Identity=32.5581395348837, Blast_Score=79, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 40000; Mature: 39869

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMGQVRRVSTASARGMARVCALNLALVLALVGAPALAQTAAQPKPSDKPSSEKPAKPAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCC
KPAAKPAEKPAAKPTNKPGAPRPDAGGGPPLLGQQISYPSLDTPGGSGDLAYGAYQRGYY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCH
LSAFNEALKRARAGTDPAAMTLLGDLYGSGYGVPLDFSKAIEWYRKAAAAGSPGALLSLG
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEC
NLTLAGQGLKKDELEAARLFREAAEKGNGPAAYNLGLLYLQGRQIPKEPTEAARWFEVAA
CEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEECEEEEEECCCCCCCHHHHHHHHHHHC
GKDIEDAQYALAVLLKEGNGVEKDVAQSAQLMASAARLGHITAQVEFAIMQFNGVGVPKD
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCH
EAAAAAMFRKAALGGNAIAQNRYARLLAVGRGVSQDKTQAAAWHLLAKHRGLGDPMLDEV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
LEKLPAADRKKAEAQAARWEAGRA
HHHCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SMGQVRRVSTASARGMARVCALNLALVLALVGAPALAQTAAQPKPSDKPSSEKPAKPAA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCC
KPAAKPAEKPAAKPTNKPGAPRPDAGGGPPLLGQQISYPSLDTPGGSGDLAYGAYQRGYY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCH
LSAFNEALKRARAGTDPAAMTLLGDLYGSGYGVPLDFSKAIEWYRKAAAAGSPGALLSLG
HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEC
NLTLAGQGLKKDELEAARLFREAAEKGNGPAAYNLGLLYLQGRQIPKEPTEAARWFEVAA
CEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEECEEEEEECCCCCCCHHHHHHHHHHHC
GKDIEDAQYALAVLLKEGNGVEKDVAQSAQLMASAARLGHITAQVEFAIMQFNGVGVPKD
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCH
EAAAAAMFRKAALGGNAIAQNRYARLLAVGRGVSQDKTQAAAWHLLAKHRGLGDPMLDEV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
LEKLPAADRKKAEAQAARWEAGRA
HHHCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]