| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is thiE [H]
Identifier: 154247007
GI number: 154247007
Start: 3417830
End: 3418456
Strand: Direct
Name: thiE [H]
Synonym: Xaut_3078
Alternate gene names: 154247007
Gene position: 3417830-3418456 (Clockwise)
Preceding gene: 154247006
Following gene: 154247008
Centisome position: 64.38
GC content: 73.84
Gene sequence:
>627_bases ATGTCTTCCCCTTTGCCGCCGCCCGGCGCCCGACTCATGCTCGTCTTCACCCTCACGCCCGAGCTGCGGCCGGACGCGGC GGCTGCGGCCGTGCGCGCCGGTGACGTGGCGGCCGTGGTGCTGCGCGTGCCCAAAGACGGCGCGCCCGATATCCGCCACC TGCGCGCCGTGGCCGAGGCGCTCCAGAAGCACGATGCAGCGGTGCTGGTGGAGGGGCCGGACACTCTCGTCACCGCCGCC GGCCTCGATGGGGTCCATGTGAGCGATCTGCGCGGCCTTCAGGCCGCGCTGCGCGAGCTGAAGCCGCAGGCCATCGTGGG GGCGGGCGGCCTCGCCAGCCGCCACGACGCCATGGAGGCCGGGGAAAGCGGGGCGGACTATGTCTTCTTCGGCGCGCTGG AGCCCCGGCCGGGGGACGCTCCTGAGATTCTTGATCTCGTGGCCTGGTGGGCCGAGCTGTTCGAGGTGCCCTGCGTGGGT CTTGCCGCCTCCCTCGACGAGGCCGAGGCTCTGGCCCAGGCCGGCGCCGATTTCGTCGCGCTGGCCGAGGCGCTGGTGGC GGACGGCGGCGCGGCGACGGTGACGGCGGCCATGGACCGCCTTTCGCGCGTGGACGCCCAGCCATGA
Upstream 100 bases:
>100_bases GGTAGAGCAGATACCAGTCAGATTGCGCCGCAGCCTGATCGGCCCGAGCTCCTGCGGGCCGTGCCCCCAATTTGCCGATT TCTTGGCCGACCGATCATCC
Downstream 100 bases:
>100_bases GCATGGGTCAGGTCCGGCGCGTTTCGACGGCGTCTGCGCGGGGAATGGCGCGCGTCTGCGCCCTGAACCTCGCGCTGGTC CTTGCGCTGGTGGGCGCGCC
Product: thiamine monophosphate synthase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MSSPLPPPGARLMLVFTLTPELRPDAAAAAVRAGDVAAVVLRVPKDGAPDIRHLRAVAEALQKHDAAVLVEGPDTLVTAA GLDGVHVSDLRGLQAALRELKPQAIVGAGGLASRHDAMEAGESGADYVFFGALEPRPGDAPEILDLVAWWAELFEVPCVG LAASLDEAEALAQAGADFVALAEALVADGGAATVTAAMDRLSRVDAQP
Sequences:
>Translated_208_residues MSSPLPPPGARLMLVFTLTPELRPDAAAAAVRAGDVAAVVLRVPKDGAPDIRHLRAVAEALQKHDAAVLVEGPDTLVTAA GLDGVHVSDLRGLQAALRELKPQAIVGAGGLASRHDAMEAGESGADYVFFGALEPRPGDAPEILDLVAWWAELFEVPCVG LAASLDEAEALAQAGADFVALAEALVADGGAATVTAAMDRLSRVDAQP >Mature_207_residues SSPLPPPGARLMLVFTLTPELRPDAAAAAVRAGDVAAVVLRVPKDGAPDIRHLRAVAEALQKHDAAVLVEGPDTLVTAAG LDGVHVSDLRGLQAALRELKPQAIVGAGGLASRHDAMEAGESGADYVFFGALEPRPGDAPEILDLVAWWAELFEVPCVGL AASLDEAEALAQAGADFVALAEALVADGGAATVTAAMDRLSRVDAQP
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 21262; Mature: 21131
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPLPPPGARLMLVFTLTPELRPDAAAAAVRAGDVAAVVLRVPKDGAPDIRHLRAVAEA CCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHH LQKHDAAVLVEGPDTLVTAAGLDGVHVSDLRGLQAALRELKPQAIVGAGGLASRHDAMEA HHHCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHC GESGADYVFFGALEPRPGDAPEILDLVAWWAELFEVPCVGLAASLDEAEALAQAGADFVA CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHH LAEALVADGGAATVTAAMDRLSRVDAQP HHHHHHHCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SSPLPPPGARLMLVFTLTPELRPDAAAAAVRAGDVAAVVLRVPKDGAPDIRHLRAVAEA CCCCCCCCCEEEEEEEECCCCCCCHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHH LQKHDAAVLVEGPDTLVTAAGLDGVHVSDLRGLQAALRELKPQAIVGAGGLASRHDAMEA HHHCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHC GESGADYVFFGALEPRPGDAPEILDLVAWWAELFEVPCVGLAASLDEAEALAQAGADFVA CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHH LAEALVADGGAATVTAAMDRLSRVDAQP HHHHHHHCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA