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The map label for this gene is ybgC [C]

Identifier: 154247001

GI number: 154247001

Start: 3410465

End: 3410974

Strand: Direct

Name: ybgC [C]

Synonym: Xaut_3072

Alternate gene names: 154247001

Gene position: 3410465-3410974 (Clockwise)

Preceding gene: 154247000

Following gene: 154247003

Centisome position: 64.24

GC content: 66.86

Gene sequence:

>510_bases
ATGGTCGAGCGCCCCACATTCTCCCCGTCCGATCCGCACCTCAAACTTGCCGGCCGGCTGATCCCCGGCGGCCACGCGCT
GCATGTGCGCGTGTATTACGAGGACACGGATTTCTCCGGCATCGTCTACCACGCCAATTATCTGAGATTCATGGAGCGCG
GCCGCTCCGACTACATGCGGCTGCTGGGCGTGTTCCAGGGCGAGCTGTTCGAGCAGGCGGCGGCCGAGGCGCCGGGCTTT
CACTTCGTCGTCCGCTCCATGCAGATCGACTTCCGCAAGCCCGCTCGCATCGACGACGTGCTGGAGGTGGTGACCCTCTC
CAAGGAGGTGGCCGGCGCGTCCATCACCCTGTTGCAGCAGGTGAAGCGGGACGGCGAGGTGCTGGTGTCCGCCACCGTGC
GCGTGGCCTTCGTCTCGGAGGGGCGGGCCAAGCGCATCCCCGATGCGCTGCGCCAGGCGACGCTTCAGGATGCCCGCGCC
ACCGAAGCCATTGGCGAAAGCCAGAGCTGA

Upstream 100 bases:

>100_bases
TCCAAAATCCTGCGGCGCGTTGCCGCCGCGGGACACTTCCAGACCATCTTCGGCCGCGCCCTTTGTTCACAAGGGGCGCG
GTCTCGTTTATGAGGGCGGC

Downstream 100 bases:

>100_bases
GGCGCACGGCGCGCCGTCACACTGTCCTGACCTTCAGCCCATGCCCACCGAGCCGCGCTCCTTGGGGGCGAGCTGGGACA
CCAGTTGCTCGATGCGCTCG

Product: Pol-Pal system-associated acyl-CoA thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MVERPTFSPSDPHLKLAGRLIPGGHALHVRVYYEDTDFSGIVYHANYLRFMERGRSDYMRLLGVFQGELFEQAAAEAPGF
HFVVRSMQIDFRKPARIDDVLEVVTLSKEVAGASITLLQQVKRDGEVLVSATVRVAFVSEGRAKRIPDALRQATLQDARA
TEAIGESQS

Sequences:

>Translated_169_residues
MVERPTFSPSDPHLKLAGRLIPGGHALHVRVYYEDTDFSGIVYHANYLRFMERGRSDYMRLLGVFQGELFEQAAAEAPGF
HFVVRSMQIDFRKPARIDDVLEVVTLSKEVAGASITLLQQVKRDGEVLVSATVRVAFVSEGRAKRIPDALRQATLQDARA
TEAIGESQS
>Mature_169_residues
MVERPTFSPSDPHLKLAGRLIPGGHALHVRVYYEDTDFSGIVYHANYLRFMERGRSDYMRLLGVFQGELFEQAAAEAPGF
HFVVRSMQIDFRKPARIDDVLEVVTLSKEVAGASITLLQQVKRDGEVLVSATVRVAFVSEGRAKRIPDALRQATLQDARA
TEAIGESQS

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=123, Percent_Identity=40.650406504065, Blast_Score=80, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 18833; Mature: 18833

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVERPTFSPSDPHLKLAGRLIPGGHALHVRVYYEDTDFSGIVYHANYLRFMERGRSDYMR
CCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCEEEEHHHHHHHHHCCHHHHHH
LLGVFQGELFEQAAAEAPGFHFVVRSMQIDFRKPARIDDVLEVVTLSKEVAGASITLLQQ
HHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
VKRDGEVLVSATVRVAFVSEGRAKRIPDALRQATLQDARATEAIGESQS
HHCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVERPTFSPSDPHLKLAGRLIPGGHALHVRVYYEDTDFSGIVYHANYLRFMERGRSDYMR
CCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCEEEEHHHHHHHHHCCHHHHHH
LLGVFQGELFEQAAAEAPGFHFVVRSMQIDFRKPARIDDVLEVVTLSKEVAGASITLLQQ
HHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
VKRDGEVLVSATVRVAFVSEGRAKRIPDALRQATLQDARATEAIGESQS
HHCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]