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The map label for this gene is podJ [H]

Identifier: 154246993

GI number: 154246993

Start: 3403288

End: 3405675

Strand: Direct

Name: podJ [H]

Synonym: Xaut_3064

Alternate gene names: 154246993

Gene position: 3403288-3405675 (Clockwise)

Preceding gene: 154246991

Following gene: 154246994

Centisome position: 64.1

GC content: 73.03

Gene sequence:

>2388_bases
ATGGAGCGGACGGAACGCACGGCCCGGATGCGTGCTGCGGCAGGATCGGCCCCCCTGTGGGCGGACACGCGCAGCGATAT
GCCTGATGTCCCGGCCTGGGACGTGTTCGACATCCAGGCCTCGACCATCGAATCCCTGCGCGGGGAGGTGAGCGCCCTGC
GCGATCGCCTCGCCAATGCCGCGCCCAAGCGCGCAGTGCAGGAGATGGACAAGGCCATCACTCTCCTGTGCCGGCGCGTG
GATGAGATCCGCGCCGCCGGGGCGGTGCGCGAGGATGCCGACCACGCCCTCGCCGAGGAACTCGCCGCCATCAGGGCCGG
GGTCACCGCGTTGCGCGAGCCGGCCCATGTCCGCGCCCTTCAGGACGGCCTCGATGCCCTCGCGCGCCGGATCGACCTCA
TGGCCGCCCGCGCCGTGGACCCGGTGGAGGTGGCCCGGCTGACGGGGCAGATGGAGGAGATCCACCATCTGGTACTCCGC
GCCGCCGAGCGTCAGGATGACACTACCGCCCTTCATGCCCTCACCCAGCGTCTTCAGGCCTGTGCCGAGGCGGTGGCCAG
CGCCGGCGAGGAGACGGCCCGGCGCGTCGCCGAGGCCACCGGCGCCTTCGAGCGCAAGGCCGAGGCCCTGCTCAACCGTG
TGATCGAGGTGGAAGCCCGCGCCCGCGCCGGTGATTCGGCGGCCGCGCAGGACCTGCAAGGCTCGCTTTTGGGCGCCCTC
GAAGGCGTCCACCGCCGCCTCGATGCCATGTCGAGCACCATTTCCGGCCAGGTCACCAGCCTGTCGCCCACCATTGGTGC
CGAGGTGACGCAGCGTCTGTCGGACTTGTCCGAGCGCATCGCCGCGGCAGAGGCGGCTGGAAAGGCCGCCATCGCCCCCC
TCGCCGACGCGGTGGAGCGCACCCTTGCGGAACTGAGCGCGCAATTCAGGGACACCCACGCGCGCCTCGACCGGCTGGAC
GACATCGAGATCCAGCTCCAGCACATGGTCGCCGAGATGCGGCAGGTGCGCGAGACCACCCATGTGGCGACCGCCGAGGC
GGTGGCGGCAGTGACGGCAAAGGTCTCCGAGGATCCGGACGGCGCCGCCGTGGTGGGGCTGAAGCGGGGCCTTGCCGCCC
TCGAAGCGCGGCAGGACGAGATCGAGCGCCGCGCAGGCGAGATGCTCGCCGCCGAACTGGAATATGAACTGCGCGATATT
TCCGTCGCCCTGGACCGGGACGGGGAGGGCACCTTCGCGCCCCGCCCGGCGCCCCGGACGGCCGAACGCCCCGCCCCGGC
GCCGCAGGCCGAGATGGACGACCTCGCTTTTGATGCAGCGTCATCGCCTGATCAGGCGGCGGATGCTGCTGCCGGCTCGC
CCTGGCCCCGGAGCCCCCGCCGCTCCGACCGGGCTGGCCCGGCGCCGTCAGACACCGGCGATTCGCGGCCTCGCGTCGAT
CGCCGCGCCCGCCGGGACCGGACGCGGGAGAGGCGCGCGCCAAAGGGCTTCGTCGCCGGGCTGTTCGCCCGCAAGCGGCA
CGTGGCCATGGTCGCGCTGCTTGCCGGCGCCACCACCGTCTTCGCCGGCACCGCCGTGGGTCTCGCCTGGCGCAACGCGC
CGGACCTGCTCTCGGGAGTGACCCAGACCCTGCGTCGGCTCTCTGCTCCGGCGGTGGCCGGCGTGACGGCAGGCGACCTT
CCGGCCGCCATCGGCCCGACTGCGCTCCAGGCCGCCGCGCGCGCCGGCGATCCGGCCGCTGCCTTCCTGGTCGCCGGCCG
CTATGTGGAGGGCCGGGGTGTGGAGGCCGATCCCGACGCGGCGGTGAAGTGGCTGGCGTTCGCCATGCAGCGCGGCTCCG
CCCCCGCAGCGCACCGCCTCGGCGCACTCTATGAGTCCGCCGGCCGCGACCTGGGCGAGGCCCGCCGCTTTTATGAATGG
GCGGCAGCGCAGGGCAATGTGCGGGCCATGCACGCCCTGGCGATGCTGCTGTGCTCCGGCAACGGCCAGCCGGCGGACTG
GGAAGGCGCGGTACGCTGGTTCCGCGCCGCCGCCGAGCTGGGCTTCCGCGACAGCCAGTATAATCTTGGCGTGGTCTACG
CCCGTGGCCTCGGGGTCGCGGCCGATGCGGGGGAAGCCTTCAAGTGGCTGAGCCTTGCCGCCGCCCAGGGCGACGACGAC
AGCGGCCGCAAGCGGGACATCCTCGCCCGCGAGGCCGATGGCGCCACCCTCACCAAGGCGCAGCAGGCGGTGGCCGCCTT
CGCTCCGGGGCCGCAGAACGTGGCCGCCAACATCGTCGAGATCCGTCCGGAATGGCAGGAGGAGAGCGCTGGCTCCCCGG
TGGCCTCCCTTCCGGGCCGCACCAAGAGCGCGACCCGCCTTGCCAGCACCGTGGCGGCGGTGAAGTGA

Upstream 100 bases:

>100_bases
ACTGCGGATTTACCAAGAATTGAAACCCTCTGTTCAGTGAATCACCGCGAATGGGCACGGTAATAAGAAACCTCTCAACC
CGTGCCCCGGGGAGGCCCGA

Downstream 100 bases:

>100_bases
GCCGCCTCTTCGTGTTGCCCTTTCCTTGCCGGCGCGCCTCCCTCACGGTGCGCCCATGGACCTGAACGCGATTCGCATCC
TTGGCCTCGATCCGGGCCTG

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: Polar organelle development protein [H]

Number of amino acids: Translated: 795; Mature: 795

Protein sequence:

>795_residues
MERTERTARMRAAAGSAPLWADTRSDMPDVPAWDVFDIQASTIESLRGEVSALRDRLANAAPKRAVQEMDKAITLLCRRV
DEIRAAGAVREDADHALAEELAAIRAGVTALREPAHVRALQDGLDALARRIDLMAARAVDPVEVARLTGQMEEIHHLVLR
AAERQDDTTALHALTQRLQACAEAVASAGEETARRVAEATGAFERKAEALLNRVIEVEARARAGDSAAAQDLQGSLLGAL
EGVHRRLDAMSSTISGQVTSLSPTIGAEVTQRLSDLSERIAAAEAAGKAAIAPLADAVERTLAELSAQFRDTHARLDRLD
DIEIQLQHMVAEMRQVRETTHVATAEAVAAVTAKVSEDPDGAAVVGLKRGLAALEARQDEIERRAGEMLAAELEYELRDI
SVALDRDGEGTFAPRPAPRTAERPAPAPQAEMDDLAFDAASSPDQAADAAAGSPWPRSPRRSDRAGPAPSDTGDSRPRVD
RRARRDRTRERRAPKGFVAGLFARKRHVAMVALLAGATTVFAGTAVGLAWRNAPDLLSGVTQTLRRLSAPAVAGVTAGDL
PAAIGPTALQAAARAGDPAAAFLVAGRYVEGRGVEADPDAAVKWLAFAMQRGSAPAAHRLGALYESAGRDLGEARRFYEW
AAAQGNVRAMHALAMLLCSGNGQPADWEGAVRWFRAAAELGFRDSQYNLGVVYARGLGVAADAGEAFKWLSLAAAQGDDD
SGRKRDILAREADGATLTKAQQAVAAFAPGPQNVAANIVEIRPEWQEESAGSPVASLPGRTKSATRLASTVAAVK

Sequences:

>Translated_795_residues
MERTERTARMRAAAGSAPLWADTRSDMPDVPAWDVFDIQASTIESLRGEVSALRDRLANAAPKRAVQEMDKAITLLCRRV
DEIRAAGAVREDADHALAEELAAIRAGVTALREPAHVRALQDGLDALARRIDLMAARAVDPVEVARLTGQMEEIHHLVLR
AAERQDDTTALHALTQRLQACAEAVASAGEETARRVAEATGAFERKAEALLNRVIEVEARARAGDSAAAQDLQGSLLGAL
EGVHRRLDAMSSTISGQVTSLSPTIGAEVTQRLSDLSERIAAAEAAGKAAIAPLADAVERTLAELSAQFRDTHARLDRLD
DIEIQLQHMVAEMRQVRETTHVATAEAVAAVTAKVSEDPDGAAVVGLKRGLAALEARQDEIERRAGEMLAAELEYELRDI
SVALDRDGEGTFAPRPAPRTAERPAPAPQAEMDDLAFDAASSPDQAADAAAGSPWPRSPRRSDRAGPAPSDTGDSRPRVD
RRARRDRTRERRAPKGFVAGLFARKRHVAMVALLAGATTVFAGTAVGLAWRNAPDLLSGVTQTLRRLSAPAVAGVTAGDL
PAAIGPTALQAAARAGDPAAAFLVAGRYVEGRGVEADPDAAVKWLAFAMQRGSAPAAHRLGALYESAGRDLGEARRFYEW
AAAQGNVRAMHALAMLLCSGNGQPADWEGAVRWFRAAAELGFRDSQYNLGVVYARGLGVAADAGEAFKWLSLAAAQGDDD
SGRKRDILAREADGATLTKAQQAVAAFAPGPQNVAANIVEIRPEWQEESAGSPVASLPGRTKSATRLASTVAAVK
>Mature_795_residues
MERTERTARMRAAAGSAPLWADTRSDMPDVPAWDVFDIQASTIESLRGEVSALRDRLANAAPKRAVQEMDKAITLLCRRV
DEIRAAGAVREDADHALAEELAAIRAGVTALREPAHVRALQDGLDALARRIDLMAARAVDPVEVARLTGQMEEIHHLVLR
AAERQDDTTALHALTQRLQACAEAVASAGEETARRVAEATGAFERKAEALLNRVIEVEARARAGDSAAAQDLQGSLLGAL
EGVHRRLDAMSSTISGQVTSLSPTIGAEVTQRLSDLSERIAAAEAAGKAAIAPLADAVERTLAELSAQFRDTHARLDRLD
DIEIQLQHMVAEMRQVRETTHVATAEAVAAVTAKVSEDPDGAAVVGLKRGLAALEARQDEIERRAGEMLAAELEYELRDI
SVALDRDGEGTFAPRPAPRTAERPAPAPQAEMDDLAFDAASSPDQAADAAAGSPWPRSPRRSDRAGPAPSDTGDSRPRVD
RRARRDRTRERRAPKGFVAGLFARKRHVAMVALLAGATTVFAGTAVGLAWRNAPDLLSGVTQTLRRLSAPAVAGVTAGDL
PAAIGPTALQAAARAGDPAAAFLVAGRYVEGRGVEADPDAAVKWLAFAMQRGSAPAAHRLGALYESAGRDLGEARRFYEW
AAAQGNVRAMHALAMLLCSGNGQPADWEGAVRWFRAAAELGFRDSQYNLGVVYARGLGVAADAGEAFKWLSLAAAQGDDD
SGRKRDILAREADGATLTKAQQAVAAFAPGPQNVAANIVEIRPEWQEESAGSPVASLPGRTKSATRLASTVAAVK

Specific function: PodJL provides the positional information for the localization of several polar organelles (pili, adhesive holdfast and chemotactic apparatus) by recruiting structural (CpaE) and regulatory (PleC) proteins to a specific cell pole [H]

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Membrane; Single-pass membrane protein. Note=Both PodJL and podJS localize to the swarmer pole at different stages of the cell division [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 Sel1-like repeats [H]

Homologues:

Organism=Homo sapiens, GI151301150, Length=130, Percent_Identity=31.5384615384615, Blast_Score=77, Evalue=7e-14,
Organism=Homo sapiens, GI19923669, Length=132, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=1e-11,
Organism=Escherichia coli, GI1786867, Length=109, Percent_Identity=37.6146788990826, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI87081769, Length=179, Percent_Identity=32.9608938547486, Blast_Score=70, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002477
- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01471 PG_binding_1; PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 84183; Mature: 84183

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERTERTARMRAAAGSAPLWADTRSDMPDVPAWDVFDIQASTIESLRGEVSALRDRLANA
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCC
APKRAVQEMDKAITLLCRRVDEIRAAGAVREDADHALAEELAAIRAGVTALREPAHVRAL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
QDGLDALARRIDLMAARAVDPVEVARLTGQMEEIHHLVLRAAERQDDTTALHALTQRLQA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
CAEAVASAGEETARRVAEATGAFERKAEALLNRVIEVEARARAGDSAAAQDLQGSLLGAL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
EGVHRRLDAMSSTISGQVTSLSPTIGAEVTQRLSDLSERIAAAEAAGKAAIAPLADAVER
HHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
TLAELSAQFRDTHARLDRLDDIEIQLQHMVAEMRQVRETTHVATAEAVAAVTAKVSEDPD
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GAAVVGLKRGLAALEARQDEIERRAGEMLAAELEYELRDISVALDRDGEGTFAPRPAPRT
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCC
AERPAPAPQAEMDDLAFDAASSPDQAADAAAGSPWPRSPRRSDRAGPAPSDTGDSRPRVD
CCCCCCCCCCCHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
RRARRDRTRERRAPKGFVAGLFARKRHVAMVALLAGATTVFAGTAVGLAWRNAPDLLSGV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
TQTLRRLSAPAVAGVTAGDLPAAIGPTALQAAARAGDPAAAFLVAGRYVEGRGVEADPDA
HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCEECCCCCCCCHHH
AVKWLAFAMQRGSAPAAHRLGALYESAGRDLGEARRFYEWAAAQGNVRAMHALAMLLCSG
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
NGQPADWEGAVRWFRAAAELGFRDSQYNLGVVYARGLGVAADAGEAFKWLSLAAAQGDDD
CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCC
SGRKRDILAREADGATLTKAQQAVAAFAPGPQNVAANIVEIRPEWQEESAGSPVASLPGR
CCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCCCCCCCHHHCCCC
TKSATRLASTVAAVK
CHHHHHHHHHHHHCC
>Mature Secondary Structure
MERTERTARMRAAAGSAPLWADTRSDMPDVPAWDVFDIQASTIESLRGEVSALRDRLANA
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCC
APKRAVQEMDKAITLLCRRVDEIRAAGAVREDADHALAEELAAIRAGVTALREPAHVRAL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
QDGLDALARRIDLMAARAVDPVEVARLTGQMEEIHHLVLRAAERQDDTTALHALTQRLQA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
CAEAVASAGEETARRVAEATGAFERKAEALLNRVIEVEARARAGDSAAAQDLQGSLLGAL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
EGVHRRLDAMSSTISGQVTSLSPTIGAEVTQRLSDLSERIAAAEAAGKAAIAPLADAVER
HHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
TLAELSAQFRDTHARLDRLDDIEIQLQHMVAEMRQVRETTHVATAEAVAAVTAKVSEDPD
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GAAVVGLKRGLAALEARQDEIERRAGEMLAAELEYELRDISVALDRDGEGTFAPRPAPRT
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCC
AERPAPAPQAEMDDLAFDAASSPDQAADAAAGSPWPRSPRRSDRAGPAPSDTGDSRPRVD
CCCCCCCCCCCHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
RRARRDRTRERRAPKGFVAGLFARKRHVAMVALLAGATTVFAGTAVGLAWRNAPDLLSGV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
TQTLRRLSAPAVAGVTAGDLPAAIGPTALQAAARAGDPAAAFLVAGRYVEGRGVEADPDA
HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCEECCCCCCCCHHH
AVKWLAFAMQRGSAPAAHRLGALYESAGRDLGEARRFYEWAAAQGNVRAMHALAMLLCSG
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
NGQPADWEGAVRWFRAAAELGFRDSQYNLGVVYARGLGVAADAGEAFKWLSLAAAQGDDD
CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCC
SGRKRDILAREADGATLTKAQQAVAAFAPGPQNVAANIVEIRPEWQEESAGSPVASLPGR
CCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCCCCCCCHHHCCCC
TKSATRLASTVAAVK
CHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12370432 [H]