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The map label for this gene is ymdB [H]

Identifier: 154246990

GI number: 154246990

Start: 3400557

End: 3401378

Strand: Direct

Name: ymdB [H]

Synonym: Xaut_3061

Alternate gene names: 154246990

Gene position: 3400557-3401378 (Clockwise)

Preceding gene: 154246989

Following gene: 154246991

Centisome position: 64.05

GC content: 69.59

Gene sequence:

>822_bases
ATGCGTATCCTGTTCCTTGGTGATGTGGTCGGCCGTCCCGGCCGGGAATGCGTCGTCTCCCGCCTGCCGGACCTCGTGAG
CGACTGGAAGCTCGATCTCGTGGTGGTGAACGGGGAGAACGCCGCCGGTGGCTTCGGCATCACGGAAGCCATTTATGGCG
AGATCCTCGCCGCCGGTGCCGACGCCATCACCCTGGGCAACCACGCCTTCGACCAGCGCGAGGCCCTCGTCTTCATCGAG
CGGGCGCCGGCTTTGGTGCGGCCCATGAACTATCCCGCCGGCACGCCCGGACGCGGCGCCGCCCTGGTGGAGGCCAAGAA
CGGGGCCCGCGTGCTGGTGCTCAACGTCATGGGCCGGATCTTCATGGACCCGCTGGACGATCCCTTCGCCGCCCTCGACC
GGGCGCTGGATGGCGCGGCACTGGGCGAAATGGTGGATGCGGTGGTGGTGGACGTGCACGCCGAGACCACCAGCGAAAAG
CAGGCCATCGGCCACCATTGCGATGGGCGTGCCTCCTTGGTGGTGGGCACCCACACCCATGTGCCCACCGCCGATTACCG
TATCCTGTCCGGCGGCACCGCCTACATGACCGACGCCGGCATGTGCGGCGCCTATGACGGTGTCATCGGCATGGACAAGG
AAGAACCCCTGCGCCGCTTCACCCGCAAGCTCGCCTCCGGCCGGTTCGAGCCGGCAGCGGGGCCGGGGACCCTCTCCGGC
GTAGCGGTGGAGACAGACGACCGCACCGGCCTTGCCGTGCGCGTCGCCGCCGTGCGCCTCGGTGCGGGGCTTGAGGAGGC
GCGGCCGGCCTTCTGGGCCTGA

Upstream 100 bases:

>100_bases
ATGATGGTAACGGATATCGAAGCTTGGGCCGTCGGCCCGCGCGCCTGATCCGGCCCCGGCCCGCCGCCATGGGACCCCGC
TGCTCATTGGACCCTTCTGA

Downstream 100 bases:

>100_bases
CGAAAGGGCAAGCGGGAACCGGCAGCGAAGGCCGGCGTCATGCTGCACCCGCTTTCTTGCGCTTTTCCCCGCCGCGGACC
TATAAGGCCGGCTCCAGTCA

Product: metallophosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MRILFLGDVVGRPGRECVVSRLPDLVSDWKLDLVVVNGENAAGGFGITEAIYGEILAAGADAITLGNHAFDQREALVFIE
RAPALVRPMNYPAGTPGRGAALVEAKNGARVLVLNVMGRIFMDPLDDPFAALDRALDGAALGEMVDAVVVDVHAETTSEK
QAIGHHCDGRASLVVGTHTHVPTADYRILSGGTAYMTDAGMCGAYDGVIGMDKEEPLRRFTRKLASGRFEPAAGPGTLSG
VAVETDDRTGLAVRVAAVRLGAGLEEARPAFWA

Sequences:

>Translated_273_residues
MRILFLGDVVGRPGRECVVSRLPDLVSDWKLDLVVVNGENAAGGFGITEAIYGEILAAGADAITLGNHAFDQREALVFIE
RAPALVRPMNYPAGTPGRGAALVEAKNGARVLVLNVMGRIFMDPLDDPFAALDRALDGAALGEMVDAVVVDVHAETTSEK
QAIGHHCDGRASLVVGTHTHVPTADYRILSGGTAYMTDAGMCGAYDGVIGMDKEEPLRRFTRKLASGRFEPAAGPGTLSG
VAVETDDRTGLAVRVAAVRLGAGLEEARPAFWA
>Mature_273_residues
MRILFLGDVVGRPGRECVVSRLPDLVSDWKLDLVVVNGENAAGGFGITEAIYGEILAAGADAITLGNHAFDQREALVFIE
RAPALVRPMNYPAGTPGRGAALVEAKNGARVLVLNVMGRIFMDPLDDPFAALDRALDGAALGEMVDAVVVDVHAETTSEK
QAIGHHCDGRASLVVGTHTHVPTADYRILSGGTAYMTDAGMCGAYDGVIGMDKEEPLRRFTRKLASGRFEPAAGPGTLSG
VAVETDDRTGLAVRVAAVRLGAGLEEARPAFWA

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28692; Mature: 28692

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILFLGDVVGRPGRECVVSRLPDLVSDWKLDLVVVNGENAAGGFGITEAIYGEILAAGA
CEEEEEECCCCCCCHHHHHHHCHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCC
DAITLGNHAFDQREALVFIERAPALVRPMNYPAGTPGRGAALVEAKNGARVLVLNVMGRI
CEEEECCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCCEEEEEECCCCEEEEEEHHHHH
FMDPLDDPFAALDRALDGAALGEMVDAVVVDVHAETTSEKQAIGHHCDGRASLVVGTHTH
HCCCCCCHHHHHHHHCCHHHHHHHHHHHEEEEECCCCCHHHHHCCCCCCCEEEEEECCCC
VPTADYRILSGGTAYMTDAGMCGAYDGVIGMDKEEPLRRFTRKLASGRFEPAAGPGTLSG
CCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
VAVETDDRTGLAVRVAAVRLGAGLEEARPAFWA
EEEECCCCCCEEEEEEEHHHCCCHHHCCCCCCC
>Mature Secondary Structure
MRILFLGDVVGRPGRECVVSRLPDLVSDWKLDLVVVNGENAAGGFGITEAIYGEILAAGA
CEEEEEECCCCCCCHHHHHHHCHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCC
DAITLGNHAFDQREALVFIERAPALVRPMNYPAGTPGRGAALVEAKNGARVLVLNVMGRI
CEEEECCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCCEEEEEECCCCEEEEEEHHHHH
FMDPLDDPFAALDRALDGAALGEMVDAVVVDVHAETTSEKQAIGHHCDGRASLVVGTHTH
HCCCCCCHHHHHHHHCCHHHHHHHHHHHEEEEECCCCCHHHHHCCCCCCCEEEEEECCCC
VPTADYRILSGGTAYMTDAGMCGAYDGVIGMDKEEPLRRFTRKLASGRFEPAAGPGTLSG
CCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
VAVETDDRTGLAVRVAAVRLGAGLEEARPAFWA
EEEECCCCCCEEEEEEEHHHCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]