| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is tolQ [H]
Identifier: 154246988
GI number: 154246988
Start: 3398493
End: 3399317
Strand: Reverse
Name: tolQ [H]
Synonym: Xaut_3059
Alternate gene names: 154246988
Gene position: 3399317-3398493 (Counterclockwise)
Preceding gene: 154246992
Following gene: 154246987
Centisome position: 64.03
GC content: 66.06
Gene sequence:
>825_bases ATGACTGATTTGACACGCCGTCCCGGCATCGTGTCCCGCCTCCTTTCCGCGCCGCTGGCTGCGGCGGGCCTCGCTGCGGT CTTCACTGCAGCCCTGTGGCTGCCCACGGCAAGCTTCGCGCAGGACCTCTCCCAGGCCCCGCTGGCGGCGCCCTCGGCCG ACATCTCCTTCCTCGGCCTGTTCCTGCAGGCCCATTTCGTCGTGAAGCTGGTGATGATCGGCCTCATCACCTCATCCATC TGGGTGTGGGCCATCATCATCGACAAGTGGATGCTGTTCTCCCGCAACAAGCGCGAGATGGACCGCTTCGAGCAGGTGTT CTGGTCCGGCCAGAGCCTGGAAGACCTGTACCGCACCCTGGCCGGGCGCTCGAACCAGGGCATGGCCGCCATCTTCGTCG CCGCCATGCGGGAGTGGAAGCGCACCTATGAGGGCAGCGCCCGCTCGTTCGCCGGCCTTAACCAGCGCCTCGACAAGGTG ATGAACGTGACCATCGCCCGCGAGGTGGAGCGGCTGGAATCGCGCCTGCTGGTGCTCGCCACCGTGGGCTCGGCGGGCCC CTTTATCGGCCTGTTCGGCACGGTGTGGGGCATCATGACCTCGTTCCAGTCCATCGCCGCCTCCAAGAACACCTCGCTGG CGGTTGTGGCGCCGGGCATCGCAGAAGCCCTGTTCGCGACTGCGATGGGCCTCATTGCGGCCATCCCCGCGACGATTTTC TACAACAAGTTCATTTCCCAGACCGGGCGTCAGGCCCAGCGGCTGGAGGGATTCGCGGACGAGTTCTCCGCGATCCTCTC GCGCCAGATCGACGAGCGGGGCTGA
Upstream 100 bases:
>100_bases GTGCGCCGTCCCTGGGAGCCGGAGGCTTTGGGCCAGGCGTATGCCTGGCACCCGAGCGCAGAAGCACCTCTTCCGCACGG GAGGGGCAGCGGAGCCGAGA
Downstream 100 bases:
>100_bases TCCATGGGCATGGCGGGAGGCGGAGCGGCAGGATGGCAGAGCCGGCGTTCGCGCCGTCGCGCGCCGCCCGTGATGGCCGA GATCAACGTGACGCCCATGG
Product: Tol-Pal system TolQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTDLTRRPGIVSRLLSAPLAAAGLAAVFTAALWLPTASFAQDLSQAPLAAPSADISFLGLFLQAHFVVKLVMIGLITSSI WVWAIIIDKWMLFSRNKREMDRFEQVFWSGQSLEDLYRTLAGRSNQGMAAIFVAAMREWKRTYEGSARSFAGLNQRLDKV MNVTIAREVERLESRLLVLATVGSAGPFIGLFGTVWGIMTSFQSIAASKNTSLAVVAPGIAEALFATAMGLIAAIPATIF YNKFISQTGRQAQRLEGFADEFSAILSRQIDERG
Sequences:
>Translated_274_residues MTDLTRRPGIVSRLLSAPLAAAGLAAVFTAALWLPTASFAQDLSQAPLAAPSADISFLGLFLQAHFVVKLVMIGLITSSI WVWAIIIDKWMLFSRNKREMDRFEQVFWSGQSLEDLYRTLAGRSNQGMAAIFVAAMREWKRTYEGSARSFAGLNQRLDKV MNVTIAREVERLESRLLVLATVGSAGPFIGLFGTVWGIMTSFQSIAASKNTSLAVVAPGIAEALFATAMGLIAAIPATIF YNKFISQTGRQAQRLEGFADEFSAILSRQIDERG >Mature_273_residues TDLTRRPGIVSRLLSAPLAAAGLAAVFTAALWLPTASFAQDLSQAPLAAPSADISFLGLFLQAHFVVKLVMIGLITSSIW VWAIIIDKWMLFSRNKREMDRFEQVFWSGQSLEDLYRTLAGRSNQGMAAIFVAAMREWKRTYEGSARSFAGLNQRLDKVM NVTIAREVERLESRLLVLATVGSAGPFIGLFGTVWGIMTSFQSIAASKNTSLAVVAPGIAEALFATAMGLIAAIPATIFY NKFISQTGRQAQRLEGFADEFSAILSRQIDERG
Specific function: Involved in the tonB-independent uptake of proteins [H]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exbB/tolQ family [H]
Homologues:
Organism=Escherichia coli, GI1786958, Length=218, Percent_Identity=42.2018348623853, Blast_Score=162, Evalue=2e-41, Organism=Escherichia coli, GI1789381, Length=218, Percent_Identity=38.9908256880734, Blast_Score=137, Evalue=8e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002898 - InterPro: IPR014163 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 29918; Mature: 29787
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLTRRPGIVSRLLSAPLAAAGLAAVFTAALWLPTASFAQDLSQAPLAAPSADISFLGL CCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHH FLQAHFVVKLVMIGLITSSIWVWAIIIDKWMLFSRNKREMDRFEQVFWSGQSLEDLYRTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHH AGRSNQGMAAIFVAAMREWKRTYEGSARSFAGLNQRLDKVMNVTIAREVERLESRLLVLA CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHEE TVGSAGPFIGLFGTVWGIMTSFQSIAASKNTSLAVVAPGIAEALFATAMGLIAAIPATIF ECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH YNKFISQTGRQAQRLEGFADEFSAILSRQIDERG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDLTRRPGIVSRLLSAPLAAAGLAAVFTAALWLPTASFAQDLSQAPLAAPSADISFLGL CCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHH FLQAHFVVKLVMIGLITSSIWVWAIIIDKWMLFSRNKREMDRFEQVFWSGQSLEDLYRTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHH AGRSNQGMAAIFVAAMREWKRTYEGSARSFAGLNQRLDKVMNVTIAREVERLESRLLVLA CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHEE TVGSAGPFIGLFGTVWGIMTSFQSIAASKNTSLAVVAPGIAEALFATAMGLIAAIPATIF ECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH YNKFISQTGRQAQRLEGFADEFSAILSRQIDERG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800; 8921895 [H]