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The map label for this gene is ybbI [C]

Identifier: 154246992

GI number: 154246992

Start: 3402441

End: 3402869

Strand: Reverse

Name: ybbI [C]

Synonym: Xaut_3063

Alternate gene names: 154246992

Gene position: 3402869-3402441 (Counterclockwise)

Preceding gene: 154246997

Following gene: 154246988

Centisome position: 64.1

GC content: 70.16

Gene sequence:

>429_bases
ATGGACGCCAAGACGTTCGAACAGGGGTTTTCGACCCCGGCCTTGCACACCGGCCCGGCGGCCGCCGAGGGCACGCGCGA
CGGCGCGCTCTTCACCATCGGCGATCTCGCCCGCGAGTTCGGCATCACCCTGCGGGCGCTGCGCTTCTATGAGGACAAGG
GCCTGCTCTCGCCGCGTCGCGACGGCATGACCCGCCTGTATTCGGAAGCCGACCGCCGCCGCCTGACGGTCATCCTGAAG
GGCAAGCACCTGGGCTTCACCCTGGCCGAGATCCGCGCCTTGGTGGCCGCCCATGACGGCGAAGAGGCCAGCCTGTCGCT
GACCCGCGACCGTTGCCTGACCCAGCTCGCCCAGCTCGAGCGCCAGCGCACCGAGATCGACGCCGCCATCGCCGAGCTGA
AGACCATGGCGACCTCCCTCGCCGCCTGA

Upstream 100 bases:

>100_bases
CGTTGCGGCATGCCGCGACGACGCAATCACGACGCACACCGATCCATATTCCCGTGCCGAGCGCCCTGCGGCGGCCGGGC
GTGCGAAGGGGACCAGACGT

Downstream 100 bases:

>100_bases
CAAAGAGCCGGTCAGGTCCAATGGCCTGACCGTTTCGAGCCGACCAAACAAAAAGGCACGGACCGATCGGTCCGTGCCTT
TTTGTTTGTGCATCAAGGCG

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Zinc-Responsive Transcriptional Regulator; Transcriptional Regulator Merr Family; Regulatory Protein MerR; MerR-Family Transcriptional Regulator; Mercuric Resistance Operon Regulatory Protein MerR; HTH-Type Transcriptional Regulator; Regulatory Gene Of GnyRDBHAL Cluster GnyR; Transcriptional Regulatory Protein MerR Family; MerR Family Regulatory Family; Regulatory Protein; Transcription Regulator Protein; Transcriptional Regulator Protein; Mercuric Resistance Operon Regulatory Protein

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MDAKTFEQGFSTPALHTGPAAAEGTRDGALFTIGDLAREFGITLRALRFYEDKGLLSPRRDGMTRLYSEADRRRLTVILK
GKHLGFTLAEIRALVAAHDGEEASLSLTRDRCLTQLAQLERQRTEIDAAIAELKTMATSLAA

Sequences:

>Translated_142_residues
MDAKTFEQGFSTPALHTGPAAAEGTRDGALFTIGDLAREFGITLRALRFYEDKGLLSPRRDGMTRLYSEADRRRLTVILK
GKHLGFTLAEIRALVAAHDGEEASLSLTRDRCLTQLAQLERQRTEIDAAIAELKTMATSLAA
>Mature_142_residues
MDAKTFEQGFSTPALHTGPAAAEGTRDGALFTIGDLAREFGITLRALRFYEDKGLLSPRRDGMTRLYSEADRRRLTVILK
GKHLGFTLAEIRALVAAHDGEEASLSLTRDRCLTQLAQLERQRTEIDAAIAELKTMATSLAA

Specific function: Copper responsive transcription regulator [C]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15578; Mature: 15578

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAKTFEQGFSTPALHTGPAAAEGTRDGALFTIGDLAREFGITLRALRFYEDKGLLSPRR
CCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCH
DGMTRLYSEADRRRLTVILKGKHLGFTLAEIRALVAAHDGEEASLSLTRDRCLTQLAQLE
HHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
RQRTEIDAAIAELKTMATSLAA
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDAKTFEQGFSTPALHTGPAAAEGTRDGALFTIGDLAREFGITLRALRFYEDKGLLSPRR
CCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCH
DGMTRLYSEADRRRLTVILKGKHLGFTLAEIRALVAAHDGEEASLSLTRDRCLTQLAQLE
HHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
RQRTEIDAAIAELKTMATSLAA
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA