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The map label for this gene is 154246932

Identifier: 154246932

GI number: 154246932

Start: 3341405

End: 3341737

Strand: Reverse

Name: 154246932

Synonym: Xaut_3003

Alternate gene names: NA

Gene position: 3341737-3341405 (Counterclockwise)

Preceding gene: 154246933

Following gene: 154246931

Centisome position: 62.95

GC content: 63.96

Gene sequence:

>333_bases
GTGATCCAACGCCTGCATCAAACGCGCCATCGCCTCGTCTCGGCGCTGTCCGTCGCCACGCTCTCCGTCGTGATGGCGGC
GCCCGCCCATGCCTCCGGTTCATCCATGCCGTGGGAAGCACCGCTGCAATCCATCCTTCAGTCGATCGAAGGGCCGGTGG
CCAAGATCGTCGCCGTCATCATCATTATCACGACCGGACTGACGTTGGCCTTCGGCGACACCTCCGGGGGGTTCCGTCGC
CTGATCCAGATCGTCTTCGGCCTGTCGATCGCCTTTGCGGCGTCGAGCTTCTTTCTGTCGTTCTTCTCGTTCGGCGGCGG
GGCGCTCGTCTGA

Upstream 100 bases:

>100_bases
CGGACGGCGATTACCGCGTCACGCCCGCCGACGCACCAGCCTCCGGGAGCGACGACCGCGCGGCCTCTCTCAACCCCACC
AGCCTTGAAGGAGAAACCCT

Downstream 100 bases:

>100_bases
TGGCGGGGGTGGCCGACGACGTGCCGGGCTTCACCGTGGCGGTTCACAGAGCACTGTCCGAGCCGATCCTGCTCGGCGGC
GCTCCGCGCGCCATCGCCAT

Product: conjugal transfer protein TrbC

Products: NA

Alternate protein names: Conjugal Transfer Protein; Conjugative Transfer Protein TrbC; Conjugal Transfer Protein TRBC; Type IV Secretory Pathway VirB2 Component

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MIQRLHQTRHRLVSALSVATLSVVMAAPAHASGSSMPWEAPLQSILQSIEGPVAKIVAVIIIITTGLTLAFGDTSGGFRR
LIQIVFGLSIAFAASSFFLSFFSFGGGALV

Sequences:

>Translated_110_residues
MIQRLHQTRHRLVSALSVATLSVVMAAPAHASGSSMPWEAPLQSILQSIEGPVAKIVAVIIIITTGLTLAFGDTSGGFRR
LIQIVFGLSIAFAASSFFLSFFSFGGGALV
>Mature_110_residues
MIQRLHQTRHRLVSALSVATLSVVMAAPAHASGSSMPWEAPLQSILQSIEGPVAKIVAVIIIITTGLTLAFGDTSGGFRR
LIQIVFGLSIAFAASSFFLSFFSFGGGALV

Specific function: Unknown

COG id: COG3838

COG function: function code U; Type IV secretory pathway, VirB2 components (pilins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11532; Mature: 11532

Theoretical pI: Translated: 11.93; Mature: 11.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQRLHQTRHRLVSALSVATLSVVMAAPAHASGSSMPWEAPLQSILQSIEGPVAKIVAVI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
IIITTGLTLAFGDTSGGFRRLIQIVFGLSIAFAASSFFLSFFSFGGGALV
HHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIQRLHQTRHRLVSALSVATLSVVMAAPAHASGSSMPWEAPLQSILQSIEGPVAKIVAVI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
IIITTGLTLAFGDTSGGFRRLIQIVFGLSIAFAASSFFLSFFSFGGGALV
HHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA