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The map label for this gene is 154246931

Identifier: 154246931

GI number: 154246931

Start: 3341133

End: 3341405

Strand: Reverse

Name: 154246931

Synonym: Xaut_3002

Alternate gene names: NA

Gene position: 3341405-3341133 (Counterclockwise)

Preceding gene: 154246932

Following gene: 154246930

Centisome position: 62.94

GC content: 69.96

Gene sequence:

>273_bases
ATGGCGGGGGTGGCCGACGACGTGCCGGGCTTCACCGTGGCGGTTCACAGAGCACTGTCCGAGCCGATCCTGCTCGGCGG
CGCTCCGCGCGCCATCGCCATCATGAACGGCACGCTGGCCGGTGCGCTCGGCTTGGGCCTGCGCCTCTGGCTGGTCGGCC
TCATCGTCTGGGCCATCGGCCATTTCGCGGCGGTGTGGGCGGCCAAACGCGATCCGCTGTTCGTCGATGTCGGCCGCCGA
CACTTGCGCATCCCCGCGCACCTCTCGGTTTAA

Upstream 100 bases:

>100_bases
TCCGTCGCCTGATCCAGATCGTCTTCGGCCTGTCGATCGCCTTTGCGGCGTCGAGCTTCTTTCTGTCGTTCTTCTCGTTC
GGCGGCGGGGCGCTCGTCTG

Downstream 100 bases:

>100_bases
GGAGCGCGCTACGATGATGAACCTCGCCGAATATCGCAACAAGAACACCCGGCTCGCCGATTTCCTGCCCTGGGCGGCGC
TCGTCGGCACCGGCGTCGTG

Product: conjugal transfer protein TrbB

Products: NA

Alternate protein names: Conjugal Transfer Protein TrbD; Conjugal Transfer Protein; Conjugal Transfer TrbD Transmembrane Protein; Type IV Secretory Pathway TrbD Component; Type IV Secretory Pathway VirB3 Family Protein; Conjugal Transfer Trbd Transmembrane Protein; Type IV Secretory Pathway TrbD Component-Like Protein; Conjugative Transfer Protein TrbD; P-Type Conjugative Transfer Protein TrbD

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MAGVADDVPGFTVAVHRALSEPILLGGAPRAIAIMNGTLAGALGLGLRLWLVGLIVWAIGHFAAVWAAKRDPLFVDVGRR
HLRIPAHLSV

Sequences:

>Translated_90_residues
MAGVADDVPGFTVAVHRALSEPILLGGAPRAIAIMNGTLAGALGLGLRLWLVGLIVWAIGHFAAVWAAKRDPLFVDVGRR
HLRIPAHLSV
>Mature_89_residues
AGVADDVPGFTVAVHRALSEPILLGGAPRAIAIMNGTLAGALGLGLRLWLVGLIVWAIGHFAAVWAAKRDPLFVDVGRRH
LRIPAHLSV

Specific function: Unknown

COG id: COG5268

COG function: function code NU; Type IV secretory pathway, TrbD component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9451; Mature: 9320

Theoretical pI: Translated: 11.77; Mature: 11.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGVADDVPGFTVAVHRALSEPILLGGAPRAIAIMNGTLAGALGLGLRLWLVGLIVWAIG
CCCCCCCCCCHHHHHHHHHCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
HFAAVWAAKRDPLFVDVGRRHLRIPAHLSV
HHHHHHHCCCCCEEEECCCCEEECCCCCCC
>Mature Secondary Structure 
AGVADDVPGFTVAVHRALSEPILLGGAPRAIAIMNGTLAGALGLGLRLWLVGLIVWAIG
CCCCCCCCCHHHHHHHHHCCCEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
HFAAVWAAKRDPLFVDVGRRHLRIPAHLSV
HHHHHHHCCCCCEEEECCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA