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The map label for this gene is trbE [H]

Identifier: 154246930

GI number: 154246930

Start: 3338681

End: 3341119

Strand: Reverse

Name: trbE [H]

Synonym: Xaut_3001

Alternate gene names: 154246930

Gene position: 3341119-3338681 (Counterclockwise)

Preceding gene: 154246931

Following gene: 154246929

Centisome position: 62.93

GC content: 66.05

Gene sequence:

>2439_bases
ATGATGAACCTCGCCGAATATCGCAACAAGAACACCCGGCTCGCCGATTTCCTGCCCTGGGCGGCGCTCGTCGGCACCGG
CGTCGTGCTCAACAAGGATGGCAGCTTTCAACGCACGGCGAGGTTCCGGGGGCCGGATCTCGATTCCGCGGTGCCGGCTG
AACTGGTCGCCGTCGCCGGTCGCCTCAACAACGCTTTCCGCCGCCTCGGCTCGGGTTGGGCGATCTTTGTCGAGGCGCAG
CGCCATCCCTCGAACCGCTATCCCGACAGCAGTTTTCCCGATGCCGCTTCCGCCCTGGTCGACGCCGAGCGCAAGGCTGA
CTTCGAGGAGGCCGGGGCGCATTTCGAGTCCAGCTACTTCCTGACCTTCACCTACCTGCCGCCGGCCGAAGACGCGGCTC
GCGCCGAAAGCTGGCTCTATGAGGGCCGTGACCAGAAGGGGCTCGATCCGCACGAAGCGATGGGCGGTTTCACCGACCGC
ACCGACCGGCTGCTGCGCCTGGTCGAAGCCTTCATGCCGGAATGCCGCTGGCTCGATGACGGCGAGACGCTGACCTATCT
GCATGGCTGCGTTTCCACGCACCGGCACCGCGTCCGGGTGCCCGAAACCCCGATTTATCTCGACGCGCTGCTGGCCGACC
AGCCGCTGACCGGCGGGCTGGAGCCTCGCCTCGGACAATCGCACTTGCGCGTGCTCACCGTCACCGGTTTCCCCACTGCG
ACCACGCCCGGCCTGCTCGACGAGCTGAATCGGCTCGCCTTTCCCTATCGGTGGAGCACCCGCGCGATCCTGCTCGACAA
AACCGACGCGACAAAGCTGCTGACCAAGATCCGGCGGCAATGGTTCGCCAAGCGCAAATCCGTCGCGGCGATCCTCAAGG
AGGTGATGACCAACGAGGCGTCCGTTCTCGTGGACACCGATGCGTCGAACAAGGCCGCGGACGCCGATCTCGCGCTACAG
GAACTCGGCGCCGACTATGCCGGTATCGCCTATGTCACCGCGACGGTGACGGTGTGGGACGCCGATCCGCGCACCGCTGA
CGAGAAGCTGCGCCTGGTCGAGAAGGTCATTCAGGGCCGCGACTTCACGGTGATGGCCGAGACCATCAACGCGGTGGACG
CCTGGCTCGGCAGCCTGCCAGGGCATGTCTATGCCAATGTCCGGCAGCCGCCGGTTTCCACCCTCAATCTCGCTCACATG
ATTCCGCTCTCGGCGGTGTGGGCGGGGCCGGAACGGGACGAGCATTTTGCAGCACCGCCACTGCTCTTCGGCAAGACCGA
AGGCTCCACCCCATTCCGGTTTTCGCTTCACGTCGGCGATGTCGGACATACGCTGATCGTCGGCCCGACCGGCGCCGGCA
AGTCCGTGTTGTTGGCGCTGATGGCCTTGCAGTTCCGGCGCTACCGCCAAGCACAGGTCTTCGCCTTCGATTTCGGCGGC
TCGATCCGGGCCGCGGCACTCGCCATGGGCGGCGACTGGCACGACCTCGGTGGCGATCTGTCCGATGGAGCGGAAGCCTC
GGTCAGCCTCCAGCCACTGGCCGGCATCAACGATGTTCCCGAGCGCGCGTGGGCGGCCGACTGGATCGTGGCCATCCTGA
CACGCGAAGGCGTCGCCATCACGCCGGAGGTGAAGGAACACATCTGGACGGCGCTGACTTCGCTGGCCTCGGCGCCGGTC
GAGGAACGCACCATCACCGGCCTTTGCGTCCTGCTCCAGTCCAACGATCTGAAGCAGGCGCTGCGCGCCTATTGCATCGG
CGGTCCCTACGGACGGCTGCTCGACGCCGAGCGTGAGCATCTCGGCACCGCAACCGTGCAGGCGTTCGAGACCGAAGGGC
TGATCGGCACCGGCGCCGCGCCCGCCGTGCTCTCCTATCTGTTCCACCGCATCGAAGACCGCCTCGACGGATCGCCGACC
CTTCTCATCATCGACGAGGGCTGGCTGGCGCTCGACGACGAAGGCTTCGCCAGCCAGCTCCGCGAGTGGCTGAAGACCCT
CCGCAAGAAGAACGCCAGCGTCATCTTCGCTACGCAGTCGCTGTCCGACATCGACGGCTCGGCGATCGCGCCTGCGATCA
TCGAGAGCTGCCAGACCCGGCTCCTGTTGCCGAACGAGCGAGCCATCGAGCCGCAGATCACCGCGATCTATCGCCGCTTC
GGTCTTAACGACCGGCAGATCGAGATCATCGCGCGGGCCATGCCCAAGCGCGACTATTACTGCCAGTCCCGGCGCGGCAA
CCGCCTGTTCGAGTTGGGGCTGTCGGACGTCGCCCTAGCGCTCTGCGCCGCGTCTTCCAAAACCGACCAGACCGCGATCG
CACGGCTGTTCGCCGAACATGGTCAGGCGGGCTTCCTCACCGCTTGGCTCCGCCACCGCGATCTCGGCTGGGCGGCCGAC
CTCATCCCAACACTCACCACAACGGAGAAACTGCCATGA

Upstream 100 bases:

>100_bases
GCGGCGGTGTGGGCGGCCAAACGCGATCCGCTGTTCGTCGATGTCGGCCGCCGACACTTGCGCATCCCCGCGCACCTCTC
GGTTTAAGGAGCGCGCTACG

Downstream 100 bases:

>100_bases
CCTTGCCGCGCTCCCGCGCGGCGCGGCTCGCCGCCGCGCTGCTCGTCACCCCTGTCGTTCTCGCCCCGATGTGGGCTGCG
CCGGCGCAGGCGCAATGGAT

Product: conjugal transfer ATPase TrbE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 812; Mature: 812

Protein sequence:

>812_residues
MMNLAEYRNKNTRLADFLPWAALVGTGVVLNKDGSFQRTARFRGPDLDSAVPAELVAVAGRLNNAFRRLGSGWAIFVEAQ
RHPSNRYPDSSFPDAASALVDAERKADFEEAGAHFESSYFLTFTYLPPAEDAARAESWLYEGRDQKGLDPHEAMGGFTDR
TDRLLRLVEAFMPECRWLDDGETLTYLHGCVSTHRHRVRVPETPIYLDALLADQPLTGGLEPRLGQSHLRVLTVTGFPTA
TTPGLLDELNRLAFPYRWSTRAILLDKTDATKLLTKIRRQWFAKRKSVAAILKEVMTNEASVLVDTDASNKAADADLALQ
ELGADYAGIAYVTATVTVWDADPRTADEKLRLVEKVIQGRDFTVMAETINAVDAWLGSLPGHVYANVRQPPVSTLNLAHM
IPLSAVWAGPERDEHFAAPPLLFGKTEGSTPFRFSLHVGDVGHTLIVGPTGAGKSVLLALMALQFRRYRQAQVFAFDFGG
SIRAAALAMGGDWHDLGGDLSDGAEASVSLQPLAGINDVPERAWAADWIVAILTREGVAITPEVKEHIWTALTSLASAPV
EERTITGLCVLLQSNDLKQALRAYCIGGPYGRLLDAEREHLGTATVQAFETEGLIGTGAAPAVLSYLFHRIEDRLDGSPT
LLIIDEGWLALDDEGFASQLREWLKTLRKKNASVIFATQSLSDIDGSAIAPAIIESCQTRLLLPNERAIEPQITAIYRRF
GLNDRQIEIIARAMPKRDYYCQSRRGNRLFELGLSDVALALCAASSKTDQTAIARLFAEHGQAGFLTAWLRHRDLGWAAD
LIPTLTTTEKLP

Sequences:

>Translated_812_residues
MMNLAEYRNKNTRLADFLPWAALVGTGVVLNKDGSFQRTARFRGPDLDSAVPAELVAVAGRLNNAFRRLGSGWAIFVEAQ
RHPSNRYPDSSFPDAASALVDAERKADFEEAGAHFESSYFLTFTYLPPAEDAARAESWLYEGRDQKGLDPHEAMGGFTDR
TDRLLRLVEAFMPECRWLDDGETLTYLHGCVSTHRHRVRVPETPIYLDALLADQPLTGGLEPRLGQSHLRVLTVTGFPTA
TTPGLLDELNRLAFPYRWSTRAILLDKTDATKLLTKIRRQWFAKRKSVAAILKEVMTNEASVLVDTDASNKAADADLALQ
ELGADYAGIAYVTATVTVWDADPRTADEKLRLVEKVIQGRDFTVMAETINAVDAWLGSLPGHVYANVRQPPVSTLNLAHM
IPLSAVWAGPERDEHFAAPPLLFGKTEGSTPFRFSLHVGDVGHTLIVGPTGAGKSVLLALMALQFRRYRQAQVFAFDFGG
SIRAAALAMGGDWHDLGGDLSDGAEASVSLQPLAGINDVPERAWAADWIVAILTREGVAITPEVKEHIWTALTSLASAPV
EERTITGLCVLLQSNDLKQALRAYCIGGPYGRLLDAEREHLGTATVQAFETEGLIGTGAAPAVLSYLFHRIEDRLDGSPT
LLIIDEGWLALDDEGFASQLREWLKTLRKKNASVIFATQSLSDIDGSAIAPAIIESCQTRLLLPNERAIEPQITAIYRRF
GLNDRQIEIIARAMPKRDYYCQSRRGNRLFELGLSDVALALCAASSKTDQTAIARLFAEHGQAGFLTAWLRHRDLGWAAD
LIPTLTTTEKLP
>Mature_812_residues
MMNLAEYRNKNTRLADFLPWAALVGTGVVLNKDGSFQRTARFRGPDLDSAVPAELVAVAGRLNNAFRRLGSGWAIFVEAQ
RHPSNRYPDSSFPDAASALVDAERKADFEEAGAHFESSYFLTFTYLPPAEDAARAESWLYEGRDQKGLDPHEAMGGFTDR
TDRLLRLVEAFMPECRWLDDGETLTYLHGCVSTHRHRVRVPETPIYLDALLADQPLTGGLEPRLGQSHLRVLTVTGFPTA
TTPGLLDELNRLAFPYRWSTRAILLDKTDATKLLTKIRRQWFAKRKSVAAILKEVMTNEASVLVDTDASNKAADADLALQ
ELGADYAGIAYVTATVTVWDADPRTADEKLRLVEKVIQGRDFTVMAETINAVDAWLGSLPGHVYANVRQPPVSTLNLAHM
IPLSAVWAGPERDEHFAAPPLLFGKTEGSTPFRFSLHVGDVGHTLIVGPTGAGKSVLLALMALQFRRYRQAQVFAFDFGG
SIRAAALAMGGDWHDLGGDLSDGAEASVSLQPLAGINDVPERAWAADWIVAILTREGVAITPEVKEHIWTALTSLASAPV
EERTITGLCVLLQSNDLKQALRAYCIGGPYGRLLDAEREHLGTATVQAFETEGLIGTGAAPAVLSYLFHRIEDRLDGSPT
LLIIDEGWLALDDEGFASQLREWLKTLRKKNASVIFATQSLSDIDGSAIAPAIIESCQTRLLLPNERAIEPQITAIYRRF
GLNDRQIEIIARAMPKRDYYCQSRRGNRLFELGLSDVALALCAASSKTDQTAIARLFAEHGQAGFLTAWLRHRDLGWAAD
LIPTLTTTEKLP

Specific function: Unknown

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbE/virB4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004346
- InterPro:   IPR018145 [H]

Pfam domain/function: PF03135 CagE_TrbE_VirB [H]

EC number: NA

Molecular weight: Translated: 89148; Mature: 89148

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNLAEYRNKNTRLADFLPWAALVGTGVVLNKDGSFQRTARFRGPDLDSAVPAELVAVAG
CCCHHHHCCCCCCHHHHHHHHHHHHCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHHHH
RLNNAFRRLGSGWAIFVEAQRHPSNRYPDSSFPDAASALVDAERKADFEEAGAHFESSYF
HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCEE
LTFTYLPPAEDAARAESWLYEGRDQKGLDPHEAMGGFTDRTDRLLRLVEAFMPECRWLDD
EEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCEECCC
GETLTYLHGCVSTHRHRVRVPETPIYLDALLADQPLTGGLEPRLGQSHLRVLTVTGFPTA
CCHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCC
TTPGLLDELNRLAFPYRWSTRAILLDKTDATKLLTKIRRQWFAKRKSVAAILKEVMTNEA
CCCHHHHHHHHHCCCEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SVLVDTDASNKAADADLALQELGADYAGIAYVTATVTVWDADPRTADEKLRLVEKVIQGR
EEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCC
DFTVMAETINAVDAWLGSLPGHVYANVRQPPVSTLNLAHMIPLSAVWAGPERDEHFAAPP
CEEEHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCCCC
LLFGKTEGSTPFRFSLHVGDVGHTLIVGPTGAGKSVLLALMALQFRRYRQAQVFAFDFGG
EEEECCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCC
SIRAAALAMGGDWHDLGGDLSDGAEASVSLQPLAGINDVPERAWAADWIVAILTREGVAI
CCEEHHEEECCCHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEE
TPEVKEHIWTALTSLASAPVEERTITGLCVLLQSNDLKQALRAYCIGGPYGRLLDAEREH
CHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHH
LGTATVQAFETEGLIGTGAAPAVLSYLFHRIEDRLDGSPTLLIIDEGWLALDDEGFASQL
CCHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCHHHHHH
REWLKTLRKKNASVIFATQSLSDIDGSAIAPAIIESCQTRLLLPNERAIEPQITAIYRRF
HHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCEEECCCCCCCCHHHHHHHHHH
GLNDRQIEIIARAMPKRDYYCQSRRGNRLFELGLSDVALALCAASSKTDQTAIARLFAEH
CCCCCHHHHHHHHCCCCCCHHHCCCCCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHC
GQAGFLTAWLRHRDLGWAADLIPTLTTTEKLP
CCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MMNLAEYRNKNTRLADFLPWAALVGTGVVLNKDGSFQRTARFRGPDLDSAVPAELVAVAG
CCCHHHHCCCCCCHHHHHHHHHHHHCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHHHH
RLNNAFRRLGSGWAIFVEAQRHPSNRYPDSSFPDAASALVDAERKADFEEAGAHFESSYF
HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCEE
LTFTYLPPAEDAARAESWLYEGRDQKGLDPHEAMGGFTDRTDRLLRLVEAFMPECRWLDD
EEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCEECCC
GETLTYLHGCVSTHRHRVRVPETPIYLDALLADQPLTGGLEPRLGQSHLRVLTVTGFPTA
CCHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCC
TTPGLLDELNRLAFPYRWSTRAILLDKTDATKLLTKIRRQWFAKRKSVAAILKEVMTNEA
CCCHHHHHHHHHCCCEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SVLVDTDASNKAADADLALQELGADYAGIAYVTATVTVWDADPRTADEKLRLVEKVIQGR
EEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCC
DFTVMAETINAVDAWLGSLPGHVYANVRQPPVSTLNLAHMIPLSAVWAGPERDEHFAAPP
CEEEHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCCCC
LLFGKTEGSTPFRFSLHVGDVGHTLIVGPTGAGKSVLLALMALQFRRYRQAQVFAFDFGG
EEEECCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCC
SIRAAALAMGGDWHDLGGDLSDGAEASVSLQPLAGINDVPERAWAADWIVAILTREGVAI
CCEEHHEEECCCHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEE
TPEVKEHIWTALTSLASAPVEERTITGLCVLLQSNDLKQALRAYCIGGPYGRLLDAEREH
CHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHH
LGTATVQAFETEGLIGTGAAPAVLSYLFHRIEDRLDGSPTLLIIDEGWLALDDEGFASQL
CCHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCHHHHHH
REWLKTLRKKNASVIFATQSLSDIDGSAIAPAIIESCQTRLLLPNERAIEPQITAIYRRF
HHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCEEECCCCCCCCHHHHHHHHHH
GLNDRQIEIIARAMPKRDYYCQSRRGNRLFELGLSDVALALCAASSKTDQTAIARLFAEH
CCCCCHHHHHHHHCCCCCCHHHCCCCCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHC
GQAGFLTAWLRHRDLGWAADLIPTLTTTEKLP
CCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]