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The map label for this gene is 154246849

Identifier: 154246849

GI number: 154246849

Start: 3236795

End: 3237124

Strand: Direct

Name: 154246849

Synonym: Xaut_2914

Alternate gene names: NA

Gene position: 3236795-3237124 (Clockwise)

Preceding gene: 154246848

Following gene: 154246853

Centisome position: 60.97

GC content: 68.18

Gene sequence:

>330_bases
ATGGCACGCTTCACCGTACAGACGCGCAACGGCGATCAGATGGAGGTGACGGGCCGCGACGGCGCCACCCTGTTGAAGGC
CATGCGCAAGGCAGGCGTGGAAGAGGTGGTCGCCCAGTGTGGCGGCGGCTGCGCCTGCGCCACCTGCCATGTCTATGTGA
CGCCGCCCGAAGGGGGCGCGCTGCCGCCGGTCGGGCCGGCAGAGGCGCGGATGCTGGCGACGAGCCGTTATCGCACCCTT
AACTCCCGATTGTCCTGCCAGCTCAAGCTGGAGCCGGGTCTCGAACAGATGCTCGTGGTGATCGCGCCCGACGACGGCGG
CGATTTCTGA

Upstream 100 bases:

>100_bases
CGGTGGCCGCCGATTTCGCGTCGGTGACCATTGGATAGGGCGAATGGCGGTGGGCGCGGCGCATTTCACCGATTGAAAGC
TGGGACAGGGCACGCTTTAC

Downstream 100 bases:

>100_bases
GCGCGGGGCGTCCCATCAGGACAGGAAGTGGCCCATGGCGATGCCCGCCAGAGCGGCGGCGGCGGCGATCCCCAAAGTCT
CCAATGTGGCGCGCACAATG

Product: ferredoxin

Products: NA

Alternate protein names: Ferredoxin VI; FdVI [H]

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MARFTVQTRNGDQMEVTGRDGATLLKAMRKAGVEEVVAQCGGGCACATCHVYVTPPEGGALPPVGPAEARMLATSRYRTL
NSRLSCQLKLEPGLEQMLVVIAPDDGGDF

Sequences:

>Translated_109_residues
MARFTVQTRNGDQMEVTGRDGATLLKAMRKAGVEEVVAQCGGGCACATCHVYVTPPEGGALPPVGPAEARMLATSRYRTL
NSRLSCQLKLEPGLEQMLVVIAPDDGGDF
>Mature_108_residues
ARFTVQTRNGDQMEVTGRDGATLLKAMRKAGVEEVVAQCGGGCACATCHVYVTPPEGGALPPVGPAEARMLATSRYRTLN
SRLSCQLKLEPGLEQMLVVIAPDDGGDF

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 11510; Mature: 11379

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARFTVQTRNGDQMEVTGRDGATLLKAMRKAGVEEVVAQCGGGCACATCHVYVTPPEGGA
CCEEEEEECCCCEEEEECCCCHHHHHHHHHCCHHHHHHHCCCCEEEEEEEEEEECCCCCC
LPPVGPAEARMLATSRYRTLNSRLSCQLKLEPGLEQMLVVIAPDDGGDF
CCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCC
>Mature Secondary Structure 
ARFTVQTRNGDQMEVTGRDGATLLKAMRKAGVEEVVAQCGGGCACATCHVYVTPPEGGA
CEEEEEECCCCEEEEECCCCHHHHHHHHHCCHHHHHHHCCCCEEEEEEEEEEECCCCCC
LPPVGPAEARMLATSRYRTLNSRLSCQLKLEPGLEQMLVVIAPDDGGDF
CCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8026503; 11173487 [H]