| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is blh [H]
Identifier: 154246828
GI number: 154246828
Start: 3215580
End: 3216485
Strand: Reverse
Name: blh [H]
Synonym: Xaut_2892
Alternate gene names: 154246828
Gene position: 3216485-3215580 (Counterclockwise)
Preceding gene: 154246829
Following gene: 154246827
Centisome position: 60.59
GC content: 62.58
Gene sequence:
>906_bases ATGCCCGCCTCGTCTTCGCCTCTGAAAGGCAACCCTGTCGTGAAGGGCTTCTTCGAGAAGCGCACGTCTAGCGTCCAGTA TGTCGTCGCCGATCCGGAGACGAAGCGCGCCGCCATAATCGACCCGGTGCTGGACTTCGATCCGAAGTCCGGCGCTACGG CCACTCACTCGGCCGATCAGCTCCTCGCGCATATCGACCAGGAGGACTACACGCTGGAGTGGATTTTGGACACCCATCCG CATGCCGATCATTTCTCGGCGGCCGGCTACCTCAAGGACAAGACAGCCGTCCCGACCGCCATCGGCGAGAAGGTCGTCGA GATCCAGAAGCTCTGGAAGGGGATCTACAACCTGCCCGACAGCTTCCCGCCAGACGGCTCGCAATGGAACCGGCTCTTCG CCGACGGCGAACGTTTCAAGATCGGCAACATGGACGTCGAGGTGGTGTTCACGCCGGGGCACACGCTCGCCTCGATCGCC TACGTGGTCGGCGACGCCGCCTTCATCCACGACACTATCTTCATGCCGGATGGCGGCACAGCCCGGGCCGACTTCCCTGG CGGCTCAGCAAAGGTGCTGTGGAACAGTATTCAACGCATCATGGCGCTGCCCGACGACACCCGCTTGTTCACCGGGCACG ACTACTGCCCTGGCGGTCGAAAGCCGGAATGGGAAAGCACAGTGGCTGAGCAGAGGGCCAGGAACACGCACCTCGTAAAG GCAAGAACGGAAGAGGAGTTCGTGGCCCTGCGCGAGAAGCGCGACCGCGAGCTGCCTATGCCGAAGCTCATCCTGCACTC CCTGCAGGTGAACATCCAGGGCGGTCGGCTGCCTGAGCCCGAGGAAAACGGCATACGTTATCTCAAGATCCCCCTCGATG CGCTCGACGCACCGTGGGACGAGTGA
Upstream 100 bases:
>100_bases TCGCCGGCCTCGTGATCGTGGTCGGCCTCTACATTATTGCCCGAGGGCTCCTCGCGCTGACAGCCACTCAGCCATGAATC AATCGAAAGGAGCAAACTGC
Downstream 100 bases:
>100_bases AGGAGCCAATCATGACGACGAAAAGTGCAAAGGATCTAGTGGCTGAGGCAAGCCGGGACATCGAGACGCTTTCGGGCCCA GAAGCAGCGAAGTTGGTGGG
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MPASSSPLKGNPVVKGFFEKRTSSVQYVVADPETKRAAIIDPVLDFDPKSGATATHSADQLLAHIDQEDYTLEWILDTHP HADHFSAAGYLKDKTAVPTAIGEKVVEIQKLWKGIYNLPDSFPPDGSQWNRLFADGERFKIGNMDVEVVFTPGHTLASIA YVVGDAAFIHDTIFMPDGGTARADFPGGSAKVLWNSIQRIMALPDDTRLFTGHDYCPGGRKPEWESTVAEQRARNTHLVK ARTEEEFVALREKRDRELPMPKLILHSLQVNIQGGRLPEPEENGIRYLKIPLDALDAPWDE
Sequences:
>Translated_301_residues MPASSSPLKGNPVVKGFFEKRTSSVQYVVADPETKRAAIIDPVLDFDPKSGATATHSADQLLAHIDQEDYTLEWILDTHP HADHFSAAGYLKDKTAVPTAIGEKVVEIQKLWKGIYNLPDSFPPDGSQWNRLFADGERFKIGNMDVEVVFTPGHTLASIA YVVGDAAFIHDTIFMPDGGTARADFPGGSAKVLWNSIQRIMALPDDTRLFTGHDYCPGGRKPEWESTVAEQRARNTHLVK ARTEEEFVALREKRDRELPMPKLILHSLQVNIQGGRLPEPEENGIRYLKIPLDALDAPWDE >Mature_300_residues PASSSPLKGNPVVKGFFEKRTSSVQYVVADPETKRAAIIDPVLDFDPKSGATATHSADQLLAHIDQEDYTLEWILDTHPH ADHFSAAGYLKDKTAVPTAIGEKVVEIQKLWKGIYNLPDSFPPDGSQWNRLFADGERFKIGNMDVEVVFTPGHTLASIAY VVGDAAFIHDTIFMPDGGTARADFPGGSAKVLWNSIQRIMALPDDTRLFTGHDYCPGGRKPEWESTVAEQRARNTHLVKA RTEEEFVALREKRDRELPMPKLILHSLQVNIQGGRLPEPEENGIRYLKIPLDALDAPWDE
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=271, Percent_Identity=28.0442804428044, Blast_Score=97, Evalue=2e-20, Organism=Escherichia coli, GI1787158, Length=186, Percent_Identity=29.5698924731183, Blast_Score=69, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17538952, Length=275, Percent_Identity=28.7272727272727, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI221330176, Length=279, Percent_Identity=28.3154121863799, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI21356335, Length=200, Percent_Identity=28, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24667703, Length=200, Percent_Identity=28, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24667711, Length=200, Percent_Identity=27.5, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 33495; Mature: 33364
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASSSPLKGNPVVKGFFEKRTSSVQYVVADPETKRAAIIDPVLDFDPKSGATATHSADQ CCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCEEEECHHHCCCCCCCCCCCCHHHH LLAHIDQEDYTLEWILDTHPHADHFSAAGYLKDKTAVPTAIGEKVVEIQKLWKGIYNLPD HHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC SFPPDGSQWNRLFADGERFKIGNMDVEVVFTPGHTLASIAYVVGDAAFIHDTIFMPDGGT CCCCCCHHHHHHHCCCCEEEECCEEEEEEECCCHHHHHHHHHHHCHHHHEEEEECCCCCC ARADFPGGSAKVLWNSIQRIMALPDDTRLFTGHDYCPGGRKPEWESTVAEQRARNTHLVK EECCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEE ARTEEEFVALREKRDRELPMPKLILHSLQVNIQGGRLPEPEENGIRYLKIPLDALDAPWD ECCHHHHHHHHHHHCCCCCHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEHHHCCCCCC E C >Mature Secondary Structure PASSSPLKGNPVVKGFFEKRTSSVQYVVADPETKRAAIIDPVLDFDPKSGATATHSADQ CCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCEEEECHHHCCCCCCCCCCCCHHHH LLAHIDQEDYTLEWILDTHPHADHFSAAGYLKDKTAVPTAIGEKVVEIQKLWKGIYNLPD HHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC SFPPDGSQWNRLFADGERFKIGNMDVEVVFTPGHTLASIAYVVGDAAFIHDTIFMPDGGT CCCCCCHHHHHHHCCCCEEEECCEEEEEEECCCHHHHHHHHHHHCHHHHEEEEECCCCCC ARADFPGGSAKVLWNSIQRIMALPDDTRLFTGHDYCPGGRKPEWESTVAEQRARNTHLVK EECCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEE ARTEEEFVALREKRDRELPMPKLILHSLQVNIQGGRLPEPEENGIRYLKIPLDALDAPWD ECCHHHHHHHHHHHCCCCCHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEHHHCCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]