| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154246829
Identifier: 154246829
GI number: 154246829
Start: 3216509
End: 3217315
Strand: Reverse
Name: 154246829
Synonym: Xaut_2893
Alternate gene names: NA
Gene position: 3217315-3216509 (Counterclockwise)
Preceding gene: 154246830
Following gene: 154246828
Centisome position: 60.6
GC content: 67.78
Gene sequence:
>807_bases ATGCCCGACCTCATCACCTCTCTCCTGGCCACAGGCTCGGGCGGCATCGTGGGGCTGGTTCTCGGGCTCGTGGGCGGTGG CGGCTCGATCCTTGCCGTGCCGCTGCTGGTCTACGTGGTCGGCGTGGCCTCGCCCCACGTGGCCATCGGCACAAGCGCTG TCGCTGTTTCCGCGAGCGCCCTTGGCAATCTCTTCCCGCACTGGCGCGCCGGCAACGTCAAATGGCGGTGCGCCGCAGTC TTCGCTGCCGCCGGTGTCCTCGGCGCATTTGCTGGCGCGGCCGTCGCCAAAGCCGTCGATGGCCAGAAGCTTCTGGCGTT GTTCGGCGTCGTGATGGTCGTGATCGGCGCCGTGATGCTCCGCAGGCGGGAGGGCCGCGGCAACCCGGACGTACGCCTCT CGTCCGAGACTGCGCGAGAGCTCCTGCCTCTTCTTCTCGGGATCGGCTTCACTGTCGGAGTGTTCTCCGGGTTCTTCGGG ATCGGCGGTGGATTCCTGATCGTACCGGGATTGATGCTCGCGACCCGGATGCCGCTCGCGTTCGCCATCGGCACCTCGCT CGTTGGGGTGGCGGCCTTCGGGGCGGCGACGGCCGCCAGCTACGCGCTCTCAGGGCTCGTCGACTGGTGGCTCTCCGGCC TGTTCGTGCTCGGGGGGCTCGTCGGTGGGCTGGTCGGGACGGCACTTGGAAAAGTTGTCGCCAGCCGCAAGCAAATGCTG GGCACGCTTTTCGCCGGCCTCGTGATCGTGGTCGGCCTCTACATTATTGCCCGAGGGCTCCTCGCGCTGACAGCCACTCA GCCATGA
Upstream 100 bases:
>100_bases TCATCACGGCGATGATGACCGGCATGGCCCTGTTCCGGTTGCTCCCGGACGACTGGCCACAGGTGACCTTCCGACGCGGG CCGGCGGGAGTAGACGGCTA
Downstream 100 bases:
>100_bases ATCAATCGAAAGGAGCAAACTGCATGCCCGCCTCGTCTTCGCCTCTGAAAGGCAACCCTGTCGTGAAGGGCTTCTTCGAG AAGCGCACGTCTAGCGTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MPDLITSLLATGSGGIVGLVLGLVGGGGSILAVPLLVYVVGVASPHVAIGTSAVAVSASALGNLFPHWRAGNVKWRCAAV FAAAGVLGAFAGAAVAKAVDGQKLLALFGVVMVVIGAVMLRRREGRGNPDVRLSSETARELLPLLLGIGFTVGVFSGFFG IGGGFLIVPGLMLATRMPLAFAIGTSLVGVAAFGAATAASYALSGLVDWWLSGLFVLGGLVGGLVGTALGKVVASRKQML GTLFAGLVIVVGLYIIARGLLALTATQP
Sequences:
>Translated_268_residues MPDLITSLLATGSGGIVGLVLGLVGGGGSILAVPLLVYVVGVASPHVAIGTSAVAVSASALGNLFPHWRAGNVKWRCAAV FAAAGVLGAFAGAAVAKAVDGQKLLALFGVVMVVIGAVMLRRREGRGNPDVRLSSETARELLPLLLGIGFTVGVFSGFFG IGGGFLIVPGLMLATRMPLAFAIGTSLVGVAAFGAATAASYALSGLVDWWLSGLFVLGGLVGGLVGTALGKVVASRKQML GTLFAGLVIVVGLYIIARGLLALTATQP >Mature_267_residues PDLITSLLATGSGGIVGLVLGLVGGGGSILAVPLLVYVVGVASPHVAIGTSAVAVSASALGNLFPHWRAGNVKWRCAAVF AAAGVLGAFAGAAVAKAVDGQKLLALFGVVMVVIGAVMLRRREGRGNPDVRLSSETARELLPLLLGIGFTVGVFSGFFGI GGGFLIVPGLMLATRMPLAFAIGTSLVGVAAFGAATAASYALSGLVDWWLSGLFVLGGLVGGLVGTALGKVVASRKQMLG TLFAGLVIVVGLYIIARGLLALTATQP
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0721 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002781 [H]
Pfam domain/function: PF01925 DUF81 [H]
EC number: NA
Molecular weight: Translated: 26676; Mature: 26545
Theoretical pI: Translated: 11.23; Mature: 11.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDLITSLLATGSGGIVGLVLGLVGGGGSILAVPLLVYVVGVASPHVAIGTSAVAVSASA CHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHH LGNLFPHWRAGNVKWRCAAVFAAAGVLGAFAGAAVAKAVDGQKLLALFGVVMVVIGAVML HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH RRREGRGNPDVRLSSETARELLPLLLGIGFTVGVFSGFFGIGGGFLIVPGLMLATRMPLA HHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHH FAIGTSLVGVAAFGAATAASYALSGLVDWWLSGLFVLGGLVGGLVGTALGKVVASRKQML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTLFAGLVIVVGLYIIARGLLALTATQP HHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PDLITSLLATGSGGIVGLVLGLVGGGGSILAVPLLVYVVGVASPHVAIGTSAVAVSASA HHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHH LGNLFPHWRAGNVKWRCAAVFAAAGVLGAFAGAAVAKAVDGQKLLALFGVVMVVIGAVML HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH RRREGRGNPDVRLSSETARELLPLLLGIGFTVGVFSGFFGIGGGFLIVPGLMLATRMPLA HHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHH FAIGTSLVGVAAFGAATAASYALSGLVDWWLSGLFVLGGLVGGLVGTALGKVVASRKQML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTLFAGLVIVVGLYIIARGLLALTATQP HHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12533478 [H]