| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154246783
Identifier: 154246783
GI number: 154246783
Start: 3173500
End: 3174216
Strand: Reverse
Name: 154246783
Synonym: Xaut_2844
Alternate gene names: NA
Gene position: 3174216-3173500 (Counterclockwise)
Preceding gene: 154246790
Following gene: 154246782
Centisome position: 59.79
GC content: 71.27
Gene sequence:
>717_bases ATGGCCGAATCTGCCGCCACCGCCGTCTGCCGGCTTATCCGCGAAGCGCGCTTTGGCACGCTGGCGACGCTGGAGGCCGC GGGCGGACCCTATGCCTCGCTGGTGGCGGTGGCCACGGATCCGGAAGGCCGCCCCACCCTGCTCATCTCCCGCCTTGCCC GGCACACCCGCAACATCGCGGGCGATGCGCGGGTCTCCCTGCTGATCTCGGCGGCGGGCGCCATCGACCCACTGAACGCG CCACGGGCCAGCCTCATCGGCCGCATCGTGCCGGCGCCCGAAGCCGAGGTGCGCACCCGGTATCTGGCCCGCCATCCGGC GGCGGCCGGCTATGTGGACTTCACCGACTTCGCCTTCCACGCCATCCATGTGGACGAGGCCCACCTGGTGGAGGGGTTCG GCCGCATCGTGGATGTGCCGGGCGCCGCCCTCCTCACCGACTGGAGCGGTGCCGAGGCGCTGGCGGCCGGTGCCGACGGC GTCATCGCCCACATGAATGCGGACCACTCGGATGCGGTCGGCCTTTATGCCACGGTGCTCCTCGGCGCGCCCGAGGGGGC GTGGCGCATGGTGGCGGTGGACCCGGAGGGCTGCGAGATTTCCAGCGGCGAGCTGGTCCGGCGGCTGGAGTTTTCGCAAC GCGTCACCGATCTTACTGCGGTGCGGCAAGAACTCGTGGCCCTCGTGCAGAAAGCGCGGCAGGGAACGGCAGCCTGA
Upstream 100 bases:
>100_bases CTCGTCTAATTACCCTTGCGTCACATTATGGCAGCGGTGGCGCTTGCGCAGGGTGGGGCGCCCGCATCATCCTGCGCCGG TTCGAAGGGAGCATGGTTTC
Downstream 100 bases:
>100_bases ACGGTGGTGTTTTCAGGAAAACGCCGAACGATATGGCCGCAACGACAGAGCTTATGCCTTCAATCGGTTAGAGAGCGATG TCATCCCGGCAGATCGCGCC
Product: pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Products: NA
Alternate protein names: Pyridoxamine Oxidase Protein; Heme Iron Utilization Protein; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxamine 5prime-Phosphate Oxidase-Related Protein; FMN Flavoprotein; Pyridoxamine 5-Phosphate Oxidase; Pyridoxamine 5-Phosphate Oxidase-Related
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MAESAATAVCRLIREARFGTLATLEAAGGPYASLVAVATDPEGRPTLLISRLARHTRNIAGDARVSLLISAAGAIDPLNA PRASLIGRIVPAPEAEVRTRYLARHPAAAGYVDFTDFAFHAIHVDEAHLVEGFGRIVDVPGAALLTDWSGAEALAAGADG VIAHMNADHSDAVGLYATVLLGAPEGAWRMVAVDPEGCEISSGELVRRLEFSQRVTDLTAVRQELVALVQKARQGTAA
Sequences:
>Translated_238_residues MAESAATAVCRLIREARFGTLATLEAAGGPYASLVAVATDPEGRPTLLISRLARHTRNIAGDARVSLLISAAGAIDPLNA PRASLIGRIVPAPEAEVRTRYLARHPAAAGYVDFTDFAFHAIHVDEAHLVEGFGRIVDVPGAALLTDWSGAEALAAGADG VIAHMNADHSDAVGLYATVLLGAPEGAWRMVAVDPEGCEISSGELVRRLEFSQRVTDLTAVRQELVALVQKARQGTAA >Mature_237_residues AESAATAVCRLIREARFGTLATLEAAGGPYASLVAVATDPEGRPTLLISRLARHTRNIAGDARVSLLISAAGAIDPLNAP RASLIGRIVPAPEAEVRTRYLARHPAAAGYVDFTDFAFHAIHVDEAHLVEGFGRIVDVPGAALLTDWSGAEALAAGADGV IAHMNADHSDAVGLYATVLLGAPEGAWRMVAVDPEGCEISSGELVRRLEFSQRVTDLTAVRQELVALVQKARQGTAA
Specific function: Unknown
COG id: COG0748
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24891; Mature: 24759
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESAATAVCRLIREARFGTLATLEAAGGPYASLVAVATDPEGRPTLLISRLARHTRNIA CCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCC GDARVSLLISAAGAIDPLNAPRASLIGRIVPAPEAEVRTRYLARHPAAAGYVDFTDFAFH CCHHHEEEEECCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHEEE AIHVDEAHLVEGFGRIVDVPGAALLTDWSGAEALAAGADGVIAHMNADHSDAVGLYATVL EEECCHHHHHHHHHHEEECCCCEEEECCCCCHHHHCCCCCEEEEECCCCCHHHHHHHHHE LGAPEGAWRMVAVDPEGCEISSGELVRRLEFSQRVTDLTAVRQELVALVQKARQGTAA EECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AESAATAVCRLIREARFGTLATLEAAGGPYASLVAVATDPEGRPTLLISRLARHTRNIA CCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCC GDARVSLLISAAGAIDPLNAPRASLIGRIVPAPEAEVRTRYLARHPAAAGYVDFTDFAFH CCHHHEEEEECCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHEEE AIHVDEAHLVEGFGRIVDVPGAALLTDWSGAEALAAGADGVIAHMNADHSDAVGLYATVL EEECCHHHHHHHHHHEEECCCCEEEECCCCCHHHHCCCCCEEEEECCCCCHHHHHHHHHE LGAPEGAWRMVAVDPEGCEISSGELVRRLEFSQRVTDLTAVRQELVALVQKARQGTAA EECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA