| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is ada [H]
Identifier: 154246752
GI number: 154246752
Start: 3133773
End: 3134702
Strand: Direct
Name: ada [H]
Synonym: Xaut_2813
Alternate gene names: 154246752
Gene position: 3133773-3134702 (Clockwise)
Preceding gene: 154246751
Following gene: 154246754
Centisome position: 59.03
GC content: 71.51
Gene sequence:
>930_bases GTGCTGGCGCTCGATTGCCCCGCCCTCGACCTGTCCGCTTCCGGAGGCCGGATGACCGCGACGCCGGCCACCCCGCTCGC CATCGCCGCCCGCGACTATGACGTGGTGCGGCGGGCAGTGGAGTATATTTCCCGCCATGTGCGCCAGCAGCCGGAGGTGG AGGAGATCGCCGCCGCCGCCGGCGTCTCTGCCCGCGCGCTCACGGACCTGTTCCGCCGCTGGTGCGGGCTGACCCCCAAG GCCTTCCTGCAGGCGGTGACCCTCGACCGCGCCCGCCGCATCGTCTCCGAATGCCCCAACGTGCTGGATGCGGCCTTCGA GCTGGGCCTGTCCGGCCCCGGCCGGCTGCACGACCTGTTCGTGGTGCACGAGGCCATGTCGCCGGGGGAGTGGAAGACCG GCGGGGCGGGGCTGGTGGTGCGCTTCGGCTTCCATCCCTCGCCGTTCGGGCTGGCGCTGGCCATGTCCACGCCGCGCGGC CTGTGCGGTCTCGCCTTCGCCGACGTGGGGGAGGAGGCCGCGGCGCTGGCCGACATGCGCGCCCGCTGGCCCAACGCCAC CTATGTGGAAGACCCCGCCGCCACCGCCCCTTTGGTAGCGCGCATTTTCGATCCCACGTCCTGGCAGGGCGACCAGCCAC TGCGGATCGTGTTCATCGGCACGGATTTCGAGATCAAGGTTTGGGAGACGCTGCTGCGCATCCCCATGGGCCTTGCCACC ACCTATTCCACCATCGCCGAGCACGTGGGCCGGCCGAAGGCGGCGCGCGCGGTGGGCGCGGCGGTGGGCAAGAACCCCAT TTCCTTCGTGGTGCCGTGCCACCGCGTCATCGGCAAGAGCGGCGACCTCACCGGCTACCACTGGGGCCTGACCCGCAAGC GCGCCATACTCGGCTGGGAAGCCGGCAAGGTGGAGCCTGCGGGGGAGTAG
Upstream 100 bases:
>100_bases GATAGGTGGGCCGGGGTCCGGCCCGGGGCGGTGAAATCGGGTGGGCGCGGCTTGCCGGCTCTGGTCAGATGGGCCACGCT CGACCTGAAGGAGATGCCCC
Downstream 100 bases:
>100_bases GGCTCTCAGGCCTTGCGGCTGGTCTTGCGGGAAATCAGCGCGCGGGGGTCGATCTTCTGCATGGGGCCAGTGCGCCGGGC ACCGATGCAACGCGATCCCG
Product: methylated-DNA--protein-cysteine methyltransferase
Products: NA
Alternate protein names: Regulatory protein of adaptative response; O-6-methylguanine-DNA alkyltransferase [H]
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MLALDCPALDLSASGGRMTATPATPLAIAARDYDVVRRAVEYISRHVRQQPEVEEIAAAAGVSARALTDLFRRWCGLTPK AFLQAVTLDRARRIVSECPNVLDAAFELGLSGPGRLHDLFVVHEAMSPGEWKTGGAGLVVRFGFHPSPFGLALAMSTPRG LCGLAFADVGEEAAALADMRARWPNATYVEDPAATAPLVARIFDPTSWQGDQPLRIVFIGTDFEIKVWETLLRIPMGLAT TYSTIAEHVGRPKAARAVGAAVGKNPISFVVPCHRVIGKSGDLTGYHWGLTRKRAILGWEAGKVEPAGE
Sequences:
>Translated_309_residues MLALDCPALDLSASGGRMTATPATPLAIAARDYDVVRRAVEYISRHVRQQPEVEEIAAAAGVSARALTDLFRRWCGLTPK AFLQAVTLDRARRIVSECPNVLDAAFELGLSGPGRLHDLFVVHEAMSPGEWKTGGAGLVVRFGFHPSPFGLALAMSTPRG LCGLAFADVGEEAAALADMRARWPNATYVEDPAATAPLVARIFDPTSWQGDQPLRIVFIGTDFEIKVWETLLRIPMGLAT TYSTIAEHVGRPKAARAVGAAVGKNPISFVVPCHRVIGKSGDLTGYHWGLTRKRAILGWEAGKVEPAGE >Mature_309_residues MLALDCPALDLSASGGRMTATPATPLAIAARDYDVVRRAVEYISRHVRQQPEVEEIAAAAGVSARALTDLFRRWCGLTPK AFLQAVTLDRARRIVSECPNVLDAAFELGLSGPGRLHDLFVVHEAMSPGEWKTGGAGLVVRFGFHPSPFGLALAMSTPRG LCGLAFADVGEEAAALADMRARWPNATYVEDPAATAPLVARIFDPTSWQGDQPLRIVFIGTDFEIKVWETLLRIPMGLAT TYSTIAEHVGRPKAARAVGAAVGKNPISFVVPCHRVIGKSGDLTGYHWGLTRKRAILGWEAGKVEPAGE
Specific function: The methylated ADA protein acts as a positive regulator of its own synthesis, as well as that of other proteins. The transcription-activating function of the ADA protein resides in its N-terminus. It activates the transcription of alkA, alkB and aidB [H]
COG id: COG0350
COG function: function code L; Methylated DNA-protein cysteine methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788542, Length=255, Percent_Identity=29.0196078431373, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1787596, Length=78, Percent_Identity=58.974358974359, Blast_Score=95, Evalue=7e-21, Organism=Caenorhabditis elegans, GI115533068, Length=84, Percent_Identity=42.8571428571429, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI115533070, Length=84, Percent_Identity=42.8571428571429, Blast_Score=88, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6320001, Length=88, Percent_Identity=45.4545454545455, Blast_Score=90, Evalue=4e-19, Organism=Drosophila melanogaster, GI17137554, Length=172, Percent_Identity=30.2325581395349, Blast_Score=89, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004026 - InterPro: IPR016221 - InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR018062 - InterPro: IPR018060 - InterPro: IPR001497 - InterPro: IPR014048 - InterPro: IPR008332 - InterPro: IPR011991 [H]
Pfam domain/function: PF02805 Ada_Zn_binding; PF01035 DNA_binding_1; PF00165 HTH_AraC; PF02870 Methyltransf_1N [H]
EC number: =2.1.1.63 [H]
Molecular weight: Translated: 33147; Mature: 33147
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: PS01124 HTH_ARAC_FAMILY_2 ; PS00374 MGMT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLALDCPALDLSASGGRMTATPATPLAIAARDYDVVRRAVEYISRHVRQQPEVEEIAAAA CCEECCCCCCCCCCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHC GVSARALTDLFRRWCGLTPKAFLQAVTLDRARRIVSECPNVLDAAFELGLSGPGRLHDLF CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHE VVHEAMSPGEWKTGGAGLVVRFGFHPSPFGLALAMSTPRGLCGLAFADVGEEAAALADMR EEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHCCHHHHHHHHHH ARWPNATYVEDPAATAPLVARIFDPTSWQGDQPLRIVFIGTDFEIKVWETLLRIPMGLAT HCCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHH TYSTIAEHVGRPKAARAVGAAVGKNPISFVVPCHRVIGKSGDLTGYHWGLTRKRAILGWE HHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCCEEECCCCCCCEEEECC AGKVEPAGE CCCCCCCCC >Mature Secondary Structure MLALDCPALDLSASGGRMTATPATPLAIAARDYDVVRRAVEYISRHVRQQPEVEEIAAAA CCEECCCCCCCCCCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHC GVSARALTDLFRRWCGLTPKAFLQAVTLDRARRIVSECPNVLDAAFELGLSGPGRLHDLF CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHE VVHEAMSPGEWKTGGAGLVVRFGFHPSPFGLALAMSTPRGLCGLAFADVGEEAAALADMR EEECCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHHHCCHHHHHHHHHH ARWPNATYVEDPAATAPLVARIFDPTSWQGDQPLRIVFIGTDFEIKVWETLLRIPMGLAT HCCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHH TYSTIAEHVGRPKAARAVGAAVGKNPISFVVPCHRVIGKSGDLTGYHWGLTRKRAILGWE HHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCCEEECCCCCCCEEEECC AGKVEPAGE CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2987251; 3887409; 9097040; 9278503; 2982792; 3536913; 3009022; 3529081; 1581309; 8202360; 8500619; 8156986 [H]