| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is fhuD [H]
Identifier: 154246721
GI number: 154246721
Start: 3080872
End: 3081777
Strand: Direct
Name: fhuD [H]
Synonym: Xaut_2782
Alternate gene names: 154246721
Gene position: 3080872-3081777 (Clockwise)
Preceding gene: 154246720
Following gene: 154246722
Centisome position: 58.03
GC content: 72.63
Gene sequence:
>906_bases ATGACAGACGCATTATTCTCCCGCCGTGCGCTGATGGCGGGTGCGGCGGCGCTCCTCGCCGGCCGGGCGATGGCTGCTCC CGGGCCACGGGTAGTGGCGTTCGACTGGGGCATCGTTGAGACTCTGCTCGGCCTCGGCGTGGTGCCGGCGGGGGTCGCGG AAGGCGATGGCTATGCCGAATGGGTGCGCGAGCCGGCGCTGCCGCCGGGCATTCCGGACCTCGGGCTGCGGGTCGAGCCC AATATGGAGGCGGTGGCGCGGCTGAGGCCGGACCTCATCGTCATCACCCCGCAACTCGCCTCGTTCGAGCCCATGCTGGC CCGCATCGCGCCCACCCTCAGCCTCGCCATCTTCGACGAGGATGGCGACGTGTGGACACGGGCGCGGCAGGTGGCGCTGG CGCTTGCCTCTGCAACCGGGCGCGAGGACGCCGGCGCGCGCCTTCTCGCGCAGGCCGATGCCGTGCTGGAGGCGGCCCGG CCGAAGGTGGAGCCCCTGACCGCCCGGCCGCTCTATCTCGCCAGCTTCGTGGATGCCCGGCACGTGCGCGTCTATGGCCG CGGTTCCCTGTTCGATGCGGTGCTGACCCGCCTCGGCATCGCCAACGCCTTTACCGGTTCCACCAGCTTCTGGGGCTTCG CCACCTTCGGGCTGGAGCACCTGGCCGCCGCGCAGGATGCGGCGTTGCTGGTGTTCGAGCCGGTGCCGCCCGAGGCCCGC GCCACCCTGGCGCACGGCCCCTTGTGGCAGCGCCTGCCCATGGTGGAGGCTGGCCGCATCGGCCTGCTGCCAACCGTGTG GTCGTTCGGCGGCCTCGTCTCCGCCATGCGCTTTGCCCGCGTGCTGGCCGACCATGCCGCCGCGTCCGCCGTCTCCGGCG CGAGGAGGGGGGATGCCCGTGGCTGA
Upstream 100 bases:
>100_bases TGGACCAGGCGCAGCCGGAGAAGACGCCGCGTCCCGCCCCGCGCTGCCCGCTGTCAGAGCGACACCCCAACGTCCGCGGC GCGGCGTCCAAGGCGGTCGC
Downstream 100 bases:
>100_bases ACGTTCCGTCCGCCTGTTCCGTCCCGCCGTGCTGGTGCTGGCGGTGTTCGCCGCAGCGCTGAGCGCGGAGAGCCTTTATG CCCGCATCGGCACCGGCTCG
Product: periplasmic binding protein
Products: ADP; phosphate; iron (III) hydroxamate [Cytoplasm] [C]
Alternate protein names: Ferric hydroxamate uptake protein D; Ferrichrome-binding periplasmic protein; Iron(III)-hydroxamate-binding protein fhuD [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTDALFSRRALMAGAAALLAGRAMAAPGPRVVAFDWGIVETLLGLGVVPAGVAEGDGYAEWVREPALPPGIPDLGLRVEP NMEAVARLRPDLIVITPQLASFEPMLARIAPTLSLAIFDEDGDVWTRARQVALALASATGREDAGARLLAQADAVLEAAR PKVEPLTARPLYLASFVDARHVRVYGRGSLFDAVLTRLGIANAFTGSTSFWGFATFGLEHLAAAQDAALLVFEPVPPEAR ATLAHGPLWQRLPMVEAGRIGLLPTVWSFGGLVSAMRFARVLADHAAASAVSGARRGDARG
Sequences:
>Translated_301_residues MTDALFSRRALMAGAAALLAGRAMAAPGPRVVAFDWGIVETLLGLGVVPAGVAEGDGYAEWVREPALPPGIPDLGLRVEP NMEAVARLRPDLIVITPQLASFEPMLARIAPTLSLAIFDEDGDVWTRARQVALALASATGREDAGARLLAQADAVLEAAR PKVEPLTARPLYLASFVDARHVRVYGRGSLFDAVLTRLGIANAFTGSTSFWGFATFGLEHLAAAQDAALLVFEPVPPEAR ATLAHGPLWQRLPMVEAGRIGLLPTVWSFGGLVSAMRFARVLADHAAASAVSGARRGDARG >Mature_300_residues TDALFSRRALMAGAAALLAGRAMAAPGPRVVAFDWGIVETLLGLGVVPAGVAEGDGYAEWVREPALPPGIPDLGLRVEPN MEAVARLRPDLIVITPQLASFEPMLARIAPTLSLAIFDEDGDVWTRARQVALALASATGREDAGARLLAQADAVLEAARP KVEPLTARPLYLASFVDARHVRVYGRGSLFDAVLTRLGIANAFTGSTSFWGFATFGLEHLAAAQDAALLVFEPVPPEARA TLAHGPLWQRLPMVEAGRIGLLPTVWSFGGLVSAMRFARVLADHAAASAVSGARRGDARG
Specific function: Part of the ABC transporter complex fhuCDB involved in iron(3+)-hydroxamate import. Binds the iron(3+)-hydroxamate complex and transfers it to the membrane-bound permease. Required for the transport of all iron(3+)-hydroxamate siderophores such as ferrich
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1786346, Length=286, Percent_Identity=37.0629370629371, Blast_Score=180, Evalue=9e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008091 - InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 31685; Mature: 31554
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDALFSRRALMAGAAALLAGRAMAAPGPRVVAFDWGIVETLLGLGVVPAGVAEGDGYAE CCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCHHH WVREPALPPGIPDLGLRVEPNMEAVARLRPDLIVITPQLASFEPMLARIAPTLSLAIFDE HHHCCCCCCCCCCCCCEECCCHHHHHHCCCCEEEECCCHHCHHHHHHHHCCEEEEEEECC DGDVWTRARQVALALASATGREDAGARLLAQADAVLEAARPKVEPLTARPLYLASFVDAR CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCC HVRVYGRGSLFDAVLTRLGIANAFTGSTSFWGFATFGLEHLAAAQDAALLVFEPVPPEAR EEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHH ATLAHGPLWQRLPMVEAGRIGLLPTVWSFGGLVSAMRFARVLADHAAASAVSGARRGDAR HECCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC G C >Mature Secondary Structure TDALFSRRALMAGAAALLAGRAMAAPGPRVVAFDWGIVETLLGLGVVPAGVAEGDGYAE CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCHHH WVREPALPPGIPDLGLRVEPNMEAVARLRPDLIVITPQLASFEPMLARIAPTLSLAIFDE HHHCCCCCCCCCCCCCEECCCHHHHHHCCCCEEEECCCHHCHHHHHHHHCCEEEEEEECC DGDVWTRARQVALALASATGREDAGARLLAQADAVLEAARPKVEPLTARPLYLASFVDAR CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCC HVRVYGRGSLFDAVLTRLGIANAFTGSTSFWGFATFGLEHLAAAQDAALLVFEPVPPEAR EEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHH ATLAHGPLWQRLPMVEAGRIGLLPTVWSFGGLVSAMRFARVLADHAAASAVSGARRGDAR HECCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron (III) hydroxamate [Periplasm]; H2O [C]
Specific reaction: ATP + iron (III) hydroxamate [Periplasm] + H2O = ADP + phosphate + iron (III) hydroxamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3301821; 2823072; 8202364; 9278503; 7651325; 10742172 [H]