| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is gsiB [H]
Identifier: 154246699
GI number: 154246699
Start: 3056144
End: 3057778
Strand: Direct
Name: gsiB [H]
Synonym: Xaut_2760
Alternate gene names: 154246699
Gene position: 3056144-3057778 (Clockwise)
Preceding gene: 154246697
Following gene: 154246700
Centisome position: 57.57
GC content: 65.32
Gene sequence:
>1635_bases ATGGGTCATCTGGCGCGATGGAAAGCGGGTGCTGTGCTCGCGGTGGCGGCAGTTCTCGTGGCGGGGGCCGCCGGCGCTCA GCAGGCCGGGGACACGCCGAAGCGCGGCGGCACGCTGTCTGCCATCATCCAGCCCGAGCCCGTCATTCTCACCGCCGCGC TCAATACGGCGGCGCCCACCGGCATCGTCACCGGCTCCATCTTCGACGGCCTCGTGGACTATGATTCCAACCTCAGGCCG GTGGCGGCCCTGGCCGAGAGCTGGGAAACTGCGAAGGACGGCCTCACCTTCACCCTGCATCTGCGGGGCGGGGTGAAGTG GCACGACGGCAAGCCCTTCACCTCCGCCGACGTGAAGTGGACGCTGGAGGAGGTGTGGAAGAAGATCCACCCCCGCAACC AGGCCATCTTCGCCAAGGTCACCTCGGTGGACACGCCGGACGACCGCACCGTGGTGCTGCACCTGAGCCAGCCCTCGGTG GCGATCCTGTCCTCGCTGAATTCCAACGGCGCCCAGGTGCTGCCCAAGCATCTCTACGAGGGCACCGACATCCTCAACAA TCCCTATAACAACAAGCCGGTGGGTACCGGGCCGTTCGTCTTCAAGGAATGGAGCCGCGGGAATTACATCGTGCTTGAGC GCAATCCCGAATACTGGGACAAGGGCAAGCCTTACCTCGACCGCGTGGTGTTCCGTGTGATCCCCGACGCCGCCGCGCGC TCCGCAGCGCTGGAGAAGGGCGAAGTGCAGTGGGGCGTGCTGAGCCCGGTGCCGCTGAAGGATGCCGAGCGCCTTGTCAG GCTGCCCAACCTTCGCGTTTCCACCGAAGGTTATGAGTGGCTCTCGCCCTGGCTGTTCGCCGACTTCAACGTGGAGCGCG GCCCCCTCAGGGACGTGAAGGTGCGCCAGGCGCTGGCCCAGGCGGTCGACCGCAACGCCATCGCCAAGGTGGTGTGGTTC GGCTTCGCCAAGCCCGCGACCAGCCCCATCCCCTCTACTCTGGCCGCGTTCCACGATGCCGGCGGCATCGCCTATGACTA CGACCCCAGGAAGGCCGAGGCGCTGCTGGATGCGGCTGGTTACAAGCGCGGCCCGGACGGCACCCGCTTCACCCTCGATA TCGACTACATTCCCTATGGCGACGACTTCAAGCGTACCGCCGAATACCTGAAGCAGGCGCTGAAGCGGGTGGGCGTCGAG GCCAATGTCCGCTCGCAGGACACCGCCGCCTTTACCCGCCGCGTCTATGGCGATCGCGACTTCGACATCTCCATCACCTG GTTCGCGGCCTTCTCCGATCCGCAGGTGGGCGTGAACCGCGCCTACTGGTCCGGCTCCGTCGGCAAGAACATTCCCTGGA CCAACGGCTCGGGCTATCGCAACGACAAGGTGGACGCGCTGATTTCCGCCACCCAGGGCGAGGCCGATCCGGAAAAGCGC ATCCAGCTGTTCAAGGACCTGCAGAAGACCGTTCTGACCGATCTTCCCACCCTTCCGCTGGTGGAGCTGAAGTTCTTCAC CGTGGAGGCCGCCAATCTCAGGCATCCCAAGGTCCGCGGCGACCAGGTGTACGGCTCGTTCCGCGACTTCTGGATCGATG ACGCAAAGGTAGCCGACGCGCCGAAATCCAACTGA
Upstream 100 bases:
>100_bases ATACATAGTATATTAAATCAGTAGAAAATATTGACTAACAGGGCGTCGGCGCATATCGTCTCAAATAGCGAGTTTGAGAT GTATTATGTGGAGTCCGAAA
Downstream 100 bases:
>100_bases GTTTCTCCCGGAACTTGGCCGTCCCGGTTCGCCCGGACGGCCCCTTCTTTCATGTCCGAGACACCGCCATGGCTTCCTTT TCCCGCCGCCAATTCCTTGC
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 544; Mature: 543
Protein sequence:
>544_residues MGHLARWKAGAVLAVAAVLVAGAAGAQQAGDTPKRGGTLSAIIQPEPVILTAALNTAAPTGIVTGSIFDGLVDYDSNLRP VAALAESWETAKDGLTFTLHLRGGVKWHDGKPFTSADVKWTLEEVWKKIHPRNQAIFAKVTSVDTPDDRTVVLHLSQPSV AILSSLNSNGAQVLPKHLYEGTDILNNPYNNKPVGTGPFVFKEWSRGNYIVLERNPEYWDKGKPYLDRVVFRVIPDAAAR SAALEKGEVQWGVLSPVPLKDAERLVRLPNLRVSTEGYEWLSPWLFADFNVERGPLRDVKVRQALAQAVDRNAIAKVVWF GFAKPATSPIPSTLAAFHDAGGIAYDYDPRKAEALLDAAGYKRGPDGTRFTLDIDYIPYGDDFKRTAEYLKQALKRVGVE ANVRSQDTAAFTRRVYGDRDFDISITWFAAFSDPQVGVNRAYWSGSVGKNIPWTNGSGYRNDKVDALISATQGEADPEKR IQLFKDLQKTVLTDLPTLPLVELKFFTVEAANLRHPKVRGDQVYGSFRDFWIDDAKVADAPKSN
Sequences:
>Translated_544_residues MGHLARWKAGAVLAVAAVLVAGAAGAQQAGDTPKRGGTLSAIIQPEPVILTAALNTAAPTGIVTGSIFDGLVDYDSNLRP VAALAESWETAKDGLTFTLHLRGGVKWHDGKPFTSADVKWTLEEVWKKIHPRNQAIFAKVTSVDTPDDRTVVLHLSQPSV AILSSLNSNGAQVLPKHLYEGTDILNNPYNNKPVGTGPFVFKEWSRGNYIVLERNPEYWDKGKPYLDRVVFRVIPDAAAR SAALEKGEVQWGVLSPVPLKDAERLVRLPNLRVSTEGYEWLSPWLFADFNVERGPLRDVKVRQALAQAVDRNAIAKVVWF GFAKPATSPIPSTLAAFHDAGGIAYDYDPRKAEALLDAAGYKRGPDGTRFTLDIDYIPYGDDFKRTAEYLKQALKRVGVE ANVRSQDTAAFTRRVYGDRDFDISITWFAAFSDPQVGVNRAYWSGSVGKNIPWTNGSGYRNDKVDALISATQGEADPEKR IQLFKDLQKTVLTDLPTLPLVELKFFTVEAANLRHPKVRGDQVYGSFRDFWIDDAKVADAPKSN >Mature_543_residues GHLARWKAGAVLAVAAVLVAGAAGAQQAGDTPKRGGTLSAIIQPEPVILTAALNTAAPTGIVTGSIFDGLVDYDSNLRPV AALAESWETAKDGLTFTLHLRGGVKWHDGKPFTSADVKWTLEEVWKKIHPRNQAIFAKVTSVDTPDDRTVVLHLSQPSVA ILSSLNSNGAQVLPKHLYEGTDILNNPYNNKPVGTGPFVFKEWSRGNYIVLERNPEYWDKGKPYLDRVVFRVIPDAAARS AALEKGEVQWGVLSPVPLKDAERLVRLPNLRVSTEGYEWLSPWLFADFNVERGPLRDVKVRQALAQAVDRNAIAKVVWFG FAKPATSPIPSTLAAFHDAGGIAYDYDPRKAEALLDAAGYKRGPDGTRFTLDIDYIPYGDDFKRTAEYLKQALKRVGVEA NVRSQDTAAFTRRVYGDRDFDISITWFAAFSDPQVGVNRAYWSGSVGKNIPWTNGSGYRNDKVDALISATQGEADPEKRI QLFKDLQKTVLTDLPTLPLVELKFFTVEAANLRHPKVRGDQVYGSFRDFWIDDAKVADAPKSN
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=462, Percent_Identity=28.7878787878788, Blast_Score=174, Evalue=2e-44, Organism=Escherichia coli, GI1789966, Length=474, Percent_Identity=28.2700421940928, Blast_Score=169, Evalue=4e-43, Organism=Escherichia coli, GI1787762, Length=420, Percent_Identity=29.0476190476191, Blast_Score=143, Evalue=3e-35, Organism=Escherichia coli, GI1787551, Length=495, Percent_Identity=25.2525252525253, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1789397, Length=479, Percent_Identity=27.5574112734864, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI1789887, Length=526, Percent_Identity=23.574144486692, Blast_Score=106, Evalue=3e-24, Organism=Escherichia coli, GI1787495, Length=533, Percent_Identity=23.4521575984991, Blast_Score=99, Evalue=8e-22, Organism=Escherichia coli, GI87081878, Length=490, Percent_Identity=23.265306122449, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI87082063, Length=498, Percent_Identity=21.8875502008032, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 59874; Mature: 59743
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHLARWKAGAVLAVAAVLVAGAAGAQQAGDTPKRGGTLSAIIQPEPVILTAALNTAAPT CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCC GIVTGSIFDGLVDYDSNLRPVAALAESWETAKDGLTFTLHLRGGVKWHDGKPFTSADVKW CEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCCCCEE TLEEVWKKIHPRNQAIFAKVTSVDTPDDRTVVLHLSQPSVAILSSLNSNGAQVLPKHLYE HHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEECCCCHHHHHHCCCCCHHHHHHHHHC GTDILNNPYNNKPVGTGPFVFKEWSRGNYIVLERNPEYWDKGKPYLDRVVFRVIPDAAAR CCHHHCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCHHHH SAALEKGEVQWGVLSPVPLKDAERLVRLPNLRVSTEGYEWLSPWLFADFNVERGPLRDVK HHHHCCCCEEEECCCCCCCHHHHHHHHCCCCEEECCCCHHHCCEEEEECCCCCCCCHHHH VRQALAQAVDRNAIAKVVWFGFAKPATSPIPSTLAAFHDAGGIAYDYDPRKAEALLDAAG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHC YKRGPDGTRFTLDIDYIPYGDDFKRTAEYLKQALKRVGVEANVRSQDTAAFTRRVYGDRD CCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC FDISITWFAAFSDPQVGVNRAYWSGSVGKNIPWTNGSGYRNDKVDALISATQGEADPEKR CEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCCHHHH IQLFKDLQKTVLTDLPTLPLVELKFFTVEAANLRHPKVRGDQVYGSFRDFWIDDAKVADA HHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCCHHHCCHHHHCCCCCCCCCC PKSN CCCC >Mature Secondary Structure GHLARWKAGAVLAVAAVLVAGAAGAQQAGDTPKRGGTLSAIIQPEPVILTAALNTAAPT CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCC GIVTGSIFDGLVDYDSNLRPVAALAESWETAKDGLTFTLHLRGGVKWHDGKPFTSADVKW CEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCCCCEE TLEEVWKKIHPRNQAIFAKVTSVDTPDDRTVVLHLSQPSVAILSSLNSNGAQVLPKHLYE HHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEECCCCHHHHHHCCCCCHHHHHHHHHC GTDILNNPYNNKPVGTGPFVFKEWSRGNYIVLERNPEYWDKGKPYLDRVVFRVIPDAAAR CCHHHCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCHHHH SAALEKGEVQWGVLSPVPLKDAERLVRLPNLRVSTEGYEWLSPWLFADFNVERGPLRDVK HHHHCCCCEEEECCCCCCCHHHHHHHHCCCCEEECCCCHHHCCEEEEECCCCCCCCHHHH VRQALAQAVDRNAIAKVVWFGFAKPATSPIPSTLAAFHDAGGIAYDYDPRKAEALLDAAG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHC YKRGPDGTRFTLDIDYIPYGDDFKRTAEYLKQALKRVGVEANVRSQDTAAFTRRVYGDRD CCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC FDISITWFAAFSDPQVGVNRAYWSGSVGKNIPWTNGSGYRNDKVDALISATQGEADPEKR CEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCCHHHH IQLFKDLQKTVLTDLPTLPLVELKFFTVEAANLRHPKVRGDQVYGSFRDFWIDDAKVADA HHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCCCCHHHCCHHHHCCCCCCCCCC PKSN CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA