| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is gsiB [H]
Identifier: 154246700
GI number: 154246700
Start: 3057847
End: 3059481
Strand: Direct
Name: gsiB [H]
Synonym: Xaut_2761
Alternate gene names: 154246700
Gene position: 3057847-3059481 (Clockwise)
Preceding gene: 154246699
Following gene: 154246701
Centisome position: 57.6
GC content: 66.06
Gene sequence:
>1635_bases ATGGCTTCCTTTTCCCGCCGCCAATTCCTTGCCGCCGCCTCGGCCCTCGCGCTCGCCGCGGCGGTCGGCCCGACGAACCT CCAGGCCGCTGCCGATGGCCCGGTGCGGGGCGGGACCCTCTCCATCATCCTCCAGCCGGAGCCGGTGACCCTCACGCCGG TGGCCAATGTCGCCCAGCCGACCCAGGTGGTGGCGGGCAATGTCTTCGATGGCCTCGTCACCTACGGCTTCGACCTGAAG CCGGCGCCCCAGCTGGCGGAAAGCTGGGAGGTGGCGCCCGACGGCCTCACCATCACCTTCCACCTGCGCAAGGGCGTCAC CTGGCACGACGGCAAGCCGTTCACGGCCAACGACGTGAAATGGTCGCTGGAGAATGTGTGGAAGACCATCCACCCGCGCA ACAAGGCGCTGTTCGAGAACGTCTCCGCCGTGGAGATCCCGGACGACCACACGGTGGTGTTGAAGTTCTCCAAGCCGTCG CTGCCGATCTTCTCCGTGCTCAACGGCGTCGGCGCACCGATCCTGCCGAAGCACCTTTATGACGGCACGGATATTCTCAA CAATCCCTACAACAACAAGCCGGTGGGAACCGGGCCGTTCGTCTTCAAGGAATGGCGCAAGGGCGAATACCTCGTGCTCG AGCGCAACCCCGCTTATTGGGATGCCGGCAAGCCTTATCTCGACAAGCTGGTGTTCCGCGTCATCCCCGATGCGGCGGCC CGCGCGGCGGCCATCGAGAAGGGGGAGGTGCAGTATGCGCCGTTCAATCCCGTGCCGTTCCGCGACGTGGAGCGCCTCGC GGCGTTGCCCAACCTGAAGGTGGAGACGCGCGGCTATGAATGGCTGTCGCCGGTGCTCTATTTCGACCTCAACGTGGAAA ACCCTTATCTGAAGGACGTGCGGGTGCGCCAGGCCATCGCCCATGCGGTGGACAAGGCGGCGCTGTCCAAGGTGGTGTGG TTTGGCTACGGCAAGCCCGCCGTCAGCCCCATCCCCTCCACGCTCACCGCCTTCCATGACCCGAGCGTGCCGACCTATCC GTTCGATCCGAAGAAGGCCGAGGCTCTGCTGGACGAAGCCGGCTTCAGGCGCGGGCCGGACGGGGTGCGCTTCGCGCTCA CCCACGATTTCCTGCCCTATGGCGACGATTATCGCCGCACCGGCGAGTTCCTGAAGCAGGCGCTGAAGCGCGTGGGCATC GAGGTGGCGATCCGCGCCCAGGACAGCGGCGCCTTCATCAAGCGCGTCTATGCCGACCGCGACTTCGACATCTCCTCCTC CTACAACGCCGCCTTCCCCGATCCGCAGATCGGCGTCGTACGCGAATACTGGTCCGGCTGGCTGGGCACCAAGACGCCGT GGACCAACGGCTCCGGCTATCGCAATGCGCAGGTGGATGCGCTCATCGAGAAGGCGGCCGTGGAGGGCGATCCGCAAGCC CGCGCTGCCGCGTTCCGTGCCTTCCAGCAGATCGTTCAGCGCGATGTGCCCACCCTGCCGCTGCTGGAGCTGAAGTTCTT CACCGTCCACGCCGCCAACCTCAAGGGCGCGGTGGAGCAGGGCGACCAGGTCTATTCCTCGCTCCGCAACGCCTGGTTCG ATGGGCCCAACGCCGACGCGCCGAAGGGGAACTGA
Upstream 100 bases:
>100_bases CAAAGGTAGCCGACGCGCCGAAATCCAACTGAGTTTCTCCCGGAACTTGGCCGTCCCGGTTCGCCCGGACGGCCCCTTCT TTCATGTCCGAGACACCGCC
Downstream 100 bases:
>100_bases GGCGTGGCTCGATACCTGAAGCGGTCGCTCGGGCAGATTGCCTTCGTCATCCTCGGCATCGCCATCATCAACTTCTTCCT GCTGCGCCTCGCGCCGGGCG
Product: extracellular solute-binding protein
Products: ADP; phosphate; dipeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 544; Mature: 543
Protein sequence:
>544_residues MASFSRRQFLAAASALALAAAVGPTNLQAAADGPVRGGTLSIILQPEPVTLTPVANVAQPTQVVAGNVFDGLVTYGFDLK PAPQLAESWEVAPDGLTITFHLRKGVTWHDGKPFTANDVKWSLENVWKTIHPRNKALFENVSAVEIPDDHTVVLKFSKPS LPIFSVLNGVGAPILPKHLYDGTDILNNPYNNKPVGTGPFVFKEWRKGEYLVLERNPAYWDAGKPYLDKLVFRVIPDAAA RAAAIEKGEVQYAPFNPVPFRDVERLAALPNLKVETRGYEWLSPVLYFDLNVENPYLKDVRVRQAIAHAVDKAALSKVVW FGYGKPAVSPIPSTLTAFHDPSVPTYPFDPKKAEALLDEAGFRRGPDGVRFALTHDFLPYGDDYRRTGEFLKQALKRVGI EVAIRAQDSGAFIKRVYADRDFDISSSYNAAFPDPQIGVVREYWSGWLGTKTPWTNGSGYRNAQVDALIEKAAVEGDPQA RAAAFRAFQQIVQRDVPTLPLLELKFFTVHAANLKGAVEQGDQVYSSLRNAWFDGPNADAPKGN
Sequences:
>Translated_544_residues MASFSRRQFLAAASALALAAAVGPTNLQAAADGPVRGGTLSIILQPEPVTLTPVANVAQPTQVVAGNVFDGLVTYGFDLK PAPQLAESWEVAPDGLTITFHLRKGVTWHDGKPFTANDVKWSLENVWKTIHPRNKALFENVSAVEIPDDHTVVLKFSKPS LPIFSVLNGVGAPILPKHLYDGTDILNNPYNNKPVGTGPFVFKEWRKGEYLVLERNPAYWDAGKPYLDKLVFRVIPDAAA RAAAIEKGEVQYAPFNPVPFRDVERLAALPNLKVETRGYEWLSPVLYFDLNVENPYLKDVRVRQAIAHAVDKAALSKVVW FGYGKPAVSPIPSTLTAFHDPSVPTYPFDPKKAEALLDEAGFRRGPDGVRFALTHDFLPYGDDYRRTGEFLKQALKRVGI EVAIRAQDSGAFIKRVYADRDFDISSSYNAAFPDPQIGVVREYWSGWLGTKTPWTNGSGYRNAQVDALIEKAAVEGDPQA RAAAFRAFQQIVQRDVPTLPLLELKFFTVHAANLKGAVEQGDQVYSSLRNAWFDGPNADAPKGN >Mature_543_residues ASFSRRQFLAAASALALAAAVGPTNLQAAADGPVRGGTLSIILQPEPVTLTPVANVAQPTQVVAGNVFDGLVTYGFDLKP APQLAESWEVAPDGLTITFHLRKGVTWHDGKPFTANDVKWSLENVWKTIHPRNKALFENVSAVEIPDDHTVVLKFSKPSL PIFSVLNGVGAPILPKHLYDGTDILNNPYNNKPVGTGPFVFKEWRKGEYLVLERNPAYWDAGKPYLDKLVFRVIPDAAAR AAAIEKGEVQYAPFNPVPFRDVERLAALPNLKVETRGYEWLSPVLYFDLNVENPYLKDVRVRQAIAHAVDKAALSKVVWF GYGKPAVSPIPSTLTAFHDPSVPTYPFDPKKAEALLDEAGFRRGPDGVRFALTHDFLPYGDDYRRTGEFLKQALKRVGIE VAIRAQDSGAFIKRVYADRDFDISSSYNAAFPDPQIGVVREYWSGWLGTKTPWTNGSGYRNAQVDALIEKAAVEGDPQAR AAAFRAFQQIVQRDVPTLPLLELKFFTVHAANLKGAVEQGDQVYSSLRNAWFDGPNADAPKGN
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1789966, Length=461, Percent_Identity=31.0195227765727, Blast_Score=180, Evalue=2e-46, Organism=Escherichia coli, GI1787052, Length=527, Percent_Identity=27.7039848197343, Blast_Score=176, Evalue=4e-45, Organism=Escherichia coli, GI1787762, Length=510, Percent_Identity=27.843137254902, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1789397, Length=531, Percent_Identity=26.3653483992467, Blast_Score=113, Evalue=4e-26, Organism=Escherichia coli, GI1789887, Length=441, Percent_Identity=26.530612244898, Blast_Score=105, Evalue=5e-24, Organism=Escherichia coli, GI1787551, Length=502, Percent_Identity=24.1035856573705, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI1787495, Length=538, Percent_Identity=23.4200743494424, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI87081878, Length=535, Percent_Identity=24.6728971962617, Blast_Score=96, Evalue=8e-21,
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 59865; Mature: 59734
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASFSRRQFLAAASALALAAAVGPTNLQAAADGPVRGGTLSIILQPEPVTLTPVANVAQP CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCC TQVVAGNVFDGLVTYGFDLKPAPQLAESWEVAPDGLTITFHLRKGVTWHDGKPFTANDVK HHHHHCHHHHHHHHCCCCCCCCHHHHHCCCCCCCCEEEEEEEECCCEECCCCCCCCCCCH WSLENVWKTIHPRNKALFENVSAVEIPDDHTVVLKFSKPSLPIFSVLNGVGAPILPKHLY HHHHHHHHHHCCCCHHHHCCCCEEECCCCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHC DGTDILNNPYNNKPVGTGPFVFKEWRKGEYLVLERNPAYWDAGKPYLDKLVFRVIPDAAA CCHHHHCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCHHHH RAAAIEKGEVQYAPFNPVPFRDVERLAALPNLKVETRGYEWLSPVLYFDLNVENPYLKDV HHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCEEECCCCHHCCCEEEEEECCCCCHHHHH RVRQAIAHAVDKAALSKVVWFGYGKPAVSPIPSTLTAFHDPSVPTYPFDPKKAEALLDEA HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHH GFRRGPDGVRFALTHDFLPYGDDYRRTGEFLKQALKRVGIEVAIRAQDSGAFIKRVYADR CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHCCC DFDISSSYNAAFPDPQIGVVREYWSGWLGTKTPWTNGSGYRNAQVDALIEKAAVEGDPQA CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHH RAAAFRAFQQIVQRDVPTLPLLELKFFTVHAANLKGAVEQGDQVYSSLRNAWFDGPNADA HHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCC PKGN CCCC >Mature Secondary Structure ASFSRRQFLAAASALALAAAVGPTNLQAAADGPVRGGTLSIILQPEPVTLTPVANVAQP CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCC TQVVAGNVFDGLVTYGFDLKPAPQLAESWEVAPDGLTITFHLRKGVTWHDGKPFTANDVK HHHHHCHHHHHHHHCCCCCCCCHHHHHCCCCCCCCEEEEEEEECCCEECCCCCCCCCCCH WSLENVWKTIHPRNKALFENVSAVEIPDDHTVVLKFSKPSLPIFSVLNGVGAPILPKHLY HHHHHHHHHHCCCCHHHHCCCCEEECCCCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHC DGTDILNNPYNNKPVGTGPFVFKEWRKGEYLVLERNPAYWDAGKPYLDKLVFRVIPDAAA CCHHHHCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCHHHH RAAAIEKGEVQYAPFNPVPFRDVERLAALPNLKVETRGYEWLSPVLYFDLNVENPYLKDV HHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCEEECCCCHHCCCEEEEEECCCCCHHHHH RVRQAIAHAVDKAALSKVVWFGYGKPAVSPIPSTLTAFHDPSVPTYPFDPKKAEALLDEA HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHH GFRRGPDGVRFALTHDFLPYGDDYRRTGEFLKQALKRVGIEVAIRAQDSGAFIKRVYADR CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHCCC DFDISSSYNAAFPDPQIGVVREYWSGWLGTKTPWTNGSGYRNAQVDALIEKAAVEGDPQA CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHH RAAAFRAFQQIVQRDVPTLPLLELKFFTVHAANLKGAVEQGDQVYSSLRNAWFDGPNADA HHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCC PKGN CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; dipeptides [Periplasm]; H2O [C]
Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA