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The map label for this gene is yedY [H]

Identifier: 154246673

GI number: 154246673

Start: 3028463

End: 3029428

Strand: Direct

Name: yedY [H]

Synonym: Xaut_2734

Alternate gene names: 154246673

Gene position: 3028463-3029428 (Clockwise)

Preceding gene: 154246672

Following gene: 154246677

Centisome position: 57.04

GC content: 65.84

Gene sequence:

>966_bases
ATGTACATTCGACGCAGGCGGGGCTGGGAAATTCCCGAATCAGCGGCGACGCCGGAGGGCCTCTATTTCTCCCGCCGGGA
GCTGATGGGCGCCGGCGCGATGCTGGCGGCGGCAAGCCTTGCGGGCCCCGCGGCGGCCCAGCGCGTCAGCGACCTTCCCG
ACCCCTCCGCCGGCCTCTACCCGGCCGCGCGGAACCCCCGCTACACCCTCGACCGGCCGGTGACGCCCGAGGCCAAGTCC
AGCACCGTCAATAATTATTACGAGTTCAGCTACGGCAAGAACGTCGCCCCCTCCATGAGCCGCTTCGAGCGTCGGCCGTG
GCTGGTGAAGATCGACGGGCTGGTGGACAACCCCCAGGAGCTGGGCATCGACGACCTGCTCAAGAAGGTCCAGCTGGAGG
AGCGCCTCTACCGCCACCGCTGCGTGGAAGCCTGGTCCATGGCGGTGCCCTGGACCGGCTTCGCCATGAAGGAACTGGTG
GCGCTGGCGGGTCCCAAGGCGGGCGCGAAATACGTGCGGATGGAGACCTTCCTGAGCCCGAAAGTCGCGTCGAATCAGAG
GGATTTCCGCTATCCGTGGCCCTATGTGGAGGGCCTCACCCTGGCCGAGGCCACCAACGAGCTGGCCTTCCTCGTCACCG
GAGTCTACGGCAAGCCGGCCCCGGGCCAGTTCGGTGCCCCGCTCAGGCTGGTAACACCTTGGAAATATGGCTTTAAATCC
ATCAAGGGCATCGTGCGCTTCTCCTTCACGGACAAGCAGCCCCTAAGCTTCTGGGAGGAGGTCCAGGGCGCGGAATACGG
CTTCTGGGCCAATGTGAATCCCAAGGTGCCGCACCCGCGCTGGAGCCAGGCGAGCGAGGAGGACATCGCCACCGGCAACC
GCCGTCCCACCGAGCTGTTCAACGGTTATGGCGAATATGTCGCCGGCCTCTATGCCGGCCGCGAGGCGGAAAAGATCTGG
TTCTGA

Upstream 100 bases:

>100_bases
GAACCTCTCGAACCCGAAACGGTGATCGAGCACACGCCCGTTTGAATTGCCCCATCGGGGCGACGCCGCGATCCTCCGCC
GCCATTGGAGGACACACAGC

Downstream 100 bases:

>100_bases
CGCGGGTTAGTCCCATCCCGCGCTATTGCGGGATGGGACCCGAGGGGGCGAGGGTCAGGGTCGCGCCGGTGATGGAAACG
CTGAGGCCGCTGTCGGAGGA

Product: putative sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MYIRRRRGWEIPESAATPEGLYFSRRELMGAGAMLAAASLAGPAAAQRVSDLPDPSAGLYPAARNPRYTLDRPVTPEAKS
STVNNYYEFSYGKNVAPSMSRFERRPWLVKIDGLVDNPQELGIDDLLKKVQLEERLYRHRCVEAWSMAVPWTGFAMKELV
ALAGPKAGAKYVRMETFLSPKVASNQRDFRYPWPYVEGLTLAEATNELAFLVTGVYGKPAPGQFGAPLRLVTPWKYGFKS
IKGIVRFSFTDKQPLSFWEEVQGAEYGFWANVNPKVPHPRWSQASEEDIATGNRRPTELFNGYGEYVAGLYAGREAEKIW
F

Sequences:

>Translated_321_residues
MYIRRRRGWEIPESAATPEGLYFSRRELMGAGAMLAAASLAGPAAAQRVSDLPDPSAGLYPAARNPRYTLDRPVTPEAKS
STVNNYYEFSYGKNVAPSMSRFERRPWLVKIDGLVDNPQELGIDDLLKKVQLEERLYRHRCVEAWSMAVPWTGFAMKELV
ALAGPKAGAKYVRMETFLSPKVASNQRDFRYPWPYVEGLTLAEATNELAFLVTGVYGKPAPGQFGAPLRLVTPWKYGFKS
IKGIVRFSFTDKQPLSFWEEVQGAEYGFWANVNPKVPHPRWSQASEEDIATGNRRPTELFNGYGEYVAGLYAGREAEKIW
F
>Mature_321_residues
MYIRRRRGWEIPESAATPEGLYFSRRELMGAGAMLAAASLAGPAAAQRVSDLPDPSAGLYPAARNPRYTLDRPVTPEAKS
STVNNYYEFSYGKNVAPSMSRFERRPWLVKIDGLVDNPQELGIDDLLKKVQLEERLYRHRCVEAWSMAVPWTGFAMKELV
ALAGPKAGAKYVRMETFLSPKVASNQRDFRYPWPYVEGLTLAEATNELAFLVTGVYGKPAPGQFGAPLRLVTPWKYGFKS
IKGIVRFSFTDKQPLSFWEEVQGAEYGFWANVNPKVPHPRWSQASEEDIATGNRRPTELFNGYGEYVAGLYAGREAEKIW
F

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=326, Percent_Identity=43.2515337423313, Blast_Score=243, Evalue=1e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 36150; Mature: 36150

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIRRRRGWEIPESAATPEGLYFSRRELMGAGAMLAAASLAGPAAAQRVSDLPDPSAGLY
CCCCCCCCCCCCHHCCCCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCC
PAARNPRYTLDRPVTPEAKSSTVNNYYEFSYGKNVAPSMSRFERRPWLVKIDGLVDNPQE
CCCCCCCEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCEEEECCCCCCHHH
LGIDDLLKKVQLEERLYRHRCVEAWSMAVPWTGFAMKELVALAGPKAGAKYVRMETFLSP
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHEEHHHHCCC
KVASNQRDFRYPWPYVEGLTLAEATNELAFLVTGVYGKPAPGQFGAPLRLVTPWKYGFKS
CCCCCCCCCCCCCCHHHCEEHHHHHCCEEEEEEECCCCCCCCCCCCCEEEECCHHHHHHH
IKGIVRFSFTDKQPLSFWEEVQGAEYGFWANVNPKVPHPRWSQASEEDIATGNRRPTELF
HHHHEEEECCCCCHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCHHHHCCCCCHHHHH
NGYGEYVAGLYAGREAEKIWF
HHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure
MYIRRRRGWEIPESAATPEGLYFSRRELMGAGAMLAAASLAGPAAAQRVSDLPDPSAGLY
CCCCCCCCCCCCHHCCCCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCC
PAARNPRYTLDRPVTPEAKSSTVNNYYEFSYGKNVAPSMSRFERRPWLVKIDGLVDNPQE
CCCCCCCEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCEEEECCCCCCHHH
LGIDDLLKKVQLEERLYRHRCVEAWSMAVPWTGFAMKELVALAGPKAGAKYVRMETFLSP
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHEEHHHHCCC
KVASNQRDFRYPWPYVEGLTLAEATNELAFLVTGVYGKPAPGQFGAPLRLVTPWKYGFKS
CCCCCCCCCCCCCCHHHCEEHHHHHCCEEEEEEECCCCCCCCCCCCCEEEECCHHHHHHH
IKGIVRFSFTDKQPLSFWEEVQGAEYGFWANVNPKVPHPRWSQASEEDIATGNRRPTELF
HHHHEEEECCCCCHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCHHHHCCCCCHHHHH
NGYGEYVAGLYAGREAEKIWF
HHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA