Click here to switch to the map view.

The map label for this gene is pcaC [H]

Identifier: 154246627

GI number: 154246627

Start: 2976853

End: 2977275

Strand: Direct

Name: pcaC [H]

Synonym: Xaut_2687

Alternate gene names: 154246627

Gene position: 2976853-2977275 (Clockwise)

Preceding gene: 154246624

Following gene: 154246628

Centisome position: 56.07

GC content: 68.09

Gene sequence:

>423_bases
GTGACACTTCCCACTGACCGCTCCTCGCGCTGGACCACCGGAATGGCAACCCGCCGCTCCGTGCTCGGCGACACCTATGT
GGACGCGGCGTCCGCCCGTACCACGCCATTCGACGAGGGGTTCCAGACCTTCATCACCGAAGGCGCCTGGGGGTCGGTCT
GGTCGCGGCCGGGCCTTACCAGGCGCGAGCGGTCCATGATCACCATCGCGCTTCTGGCGGCGCTGGGGCATGACGAGGAA
GTGGCCATGCACGTGCGCGCCACCCGCAATACCGGCGCGAGCGCCGAGGATGTCGCCGAGGCGCTCCTGCATGTGGCGGT
CTATGCCGGCGTGCCGGCGGCGAACCGCGCCTACAAGATCGCCAAGGATGTCTACGCGCAAGCGCGTACCGACGGCGACG
CACAGGGAGAAAACCATGGTTGA

Upstream 100 bases:

>100_bases
CGGCGATCCCAAACGGTGCCAGCCGGATCGTCCCAAGCGTGCGCCTGCACGTTTAGTCCAAGTTTGCCCGGCAGGCACCG
CGCCCAGATGAGGCCGTCCC

Downstream 100 bases:

>100_bases
GACGGGCGATTTCATGCGCCGGGACCGAGGCTGGCATCCGCCGGCCTTCACCCCCGGCTACAAGACCAGCGTGCTGCGCT
CGCCGCGCTTCGCGCTGGTG

Product: 4-carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTLPTDRSSRWTTGMATRRSVLGDTYVDAASARTTPFDEGFQTFITEGAWGSVWSRPGLTRRERSMITIALLAALGHDEE
VAMHVRATRNTGASAEDVAEALLHVAVYAGVPAANRAYKIAKDVYAQARTDGDAQGENHG

Sequences:

>Translated_140_residues
MTLPTDRSSRWTTGMATRRSVLGDTYVDAASARTTPFDEGFQTFITEGAWGSVWSRPGLTRRERSMITIALLAALGHDEE
VAMHVRATRNTGASAEDVAEALLHVAVYAGVPAANRAYKIAKDVYAQARTDGDAQGENHG
>Mature_139_residues
TLPTDRSSRWTTGMATRRSVLGDTYVDAASARTTPFDEGFQTFITEGAWGSVWSRPGLTRRERSMITIALLAALGHDEEV
AMHVRATRNTGASAEDVAEALLHVAVYAGVPAANRAYKIAKDVYAQARTDGDAQGENHG

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 15097; Mature: 14966

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPTDRSSRWTTGMATRRSVLGDTYVDAASARTTPFDEGFQTFITEGAWGSVWSRPGLT
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
RRERSMITIALLAALGHDEEVAMHVRATRNTGASAEDVAEALLHVAVYAGVPAANRAYKI
HHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
AKDVYAQARTDGDAQGENHG
HHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TLPTDRSSRWTTGMATRRSVLGDTYVDAASARTTPFDEGFQTFITEGAWGSVWSRPGLT
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
RRERSMITIALLAALGHDEEVAMHVRATRNTGASAEDVAEALLHVAVYAGVPAANRAYKI
HHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHH
AKDVYAQARTDGDAQGENHG
HHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]