| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245916
Identifier: 154245916
GI number: 154245916
Start: 2229424
End: 2230116
Strand: Reverse
Name: 154245916
Synonym: Xaut_1973
Alternate gene names: NA
Gene position: 2230116-2229424 (Counterclockwise)
Preceding gene: 154245917
Following gene: 154245915
Centisome position: 42.01
GC content: 70.85
Gene sequence:
>693_bases ATGTCCCAGCCCGCCGAGGCCCCGTTCCGCATTGTCATGCTCGCCTACCCGCGCATGACCCAGCTCGATCTCACCGGCCC GTTCGAGGTATTCGCGCGCCTGCCCGGAGCGCGGCTGGAGATCGTGGCCGAGAGCTGCAAGCGGCCAGTGGTGGATGTGG CGGGCCTCGGCATCATGGCCAATGCCAGCTTCAACGAGGTCGCCGGCTGCGAACTCTTGTTCGTGCCCGGCGGCCCTGGC CAGCTGGAGCTGATGGATGACGGGCCGGCGCTGGATTTCCTGCGCCGCATGGCGGTTCAGGCCCGCTATGTCACCTCGGT GTGCACCGGCTCGCTGATTCTCGGCGCCGCCGGCCTGCTCACCGGCTATCGCGCCACCAGCCACTGGCTGTCGCTGGACC AGCTGGCCCTGCTCGGCGCCATCCCGGTGGAGGAGCGGGTGGTGGTGGATCGCAACCGCTTCACCGGGGCCGGGGTCTCC TCCGGCATCGACCTCGCGCTGGCGCTGGCCGCCGAGATCGCCGGGGAGGACGAGGCGCGGCGCATCGCCCTCGCCATCGA ATATCAGCCGGCGCCCGCCTTCCCGCCTCGCGACAAGGAGGACCCCCGCCTCGTCGCCGAGGTGCGGGAGAAGACCCGCG CCTTTCAGGAAAAGCGCGTGGCGGCTGCCCGTCGCGCCGGTGAACGGCTCTGA
Upstream 100 bases:
>100_bases CTTGACGGGCGCATGGTGGAACTGCTCCACGCCGAGATGGCCAAGCGCACGGTGGCCCTCGCCGACGCCATCGCCGCCCG CGCCTGAGGTTCTAGCCCGC
Downstream 100 bases:
>100_bases AACGTCGCCTCCCGAGCGATCCGCTATCGTCCCAGGACAAAACCCATGAAGCTCTACCGCTACCTCACCGGGCCCGACGA CGCGGCCTTCTGCAAGCGCG
Product: ThiJ/PfpI domain-containing protein
Products: NA
Alternate protein names: ThiJ/PfpI Domain Protein; AraC Family Transcriptional Regulator; ThiJ/PfpI Family Protein; Transcriptional Regulator; ThiJ/PfpI; Transcriptional Regulator AraC Family; DJ-1/PfpI Family Protein; Isonitrile Hydratase; ThiJ Family Protein; DJ-1/PfpI Family; Intracellular Protease/Amidase; Transcriptional Regulatory Protein; AraC Family Transcription Regulator; Transcription Regulator Protein; DJ-1/PfpI Superfamily Protein; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator Arac Family; Twin-Arginine Translocation Pathway Signal; PfpI Family Protein; AraC Family Regulatory Helix-Turn-Helix Protein; Cyclohexyl-Isocyanide Hydratase; Hydratase; ThiH/PfpI Family Amidotransferase; AraC Family Regulatory Protein; Intracellular Protease/Amidase Protein; AraC-Family Transcriptional Regulator; Thij/Pfpi Family Protein; Transcription Regulator Protein ThiJ/PfpI; GATase1_AraC_1 Family Transcriptional Regulator; Transcriptional Regulator Protein Thij/Pfpi; Transcriptional Regulator Protein; AraC Family Regulatory Helix-Turn-Helix; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Transcriptional Regulator ThiJ/PfpI Family Protein; ThiJ/PfpI Family Transcriptional Regulator
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MSQPAEAPFRIVMLAYPRMTQLDLTGPFEVFARLPGARLEIVAESCKRPVVDVAGLGIMANASFNEVAGCELLFVPGGPG QLELMDDGPALDFLRRMAVQARYVTSVCTGSLILGAAGLLTGYRATSHWLSLDQLALLGAIPVEERVVVDRNRFTGAGVS SGIDLALALAAEIAGEDEARRIALAIEYQPAPAFPPRDKEDPRLVAEVREKTRAFQEKRVAAARRAGERL
Sequences:
>Translated_230_residues MSQPAEAPFRIVMLAYPRMTQLDLTGPFEVFARLPGARLEIVAESCKRPVVDVAGLGIMANASFNEVAGCELLFVPGGPG QLELMDDGPALDFLRRMAVQARYVTSVCTGSLILGAAGLLTGYRATSHWLSLDQLALLGAIPVEERVVVDRNRFTGAGVS SGIDLALALAAEIAGEDEARRIALAIEYQPAPAFPPRDKEDPRLVAEVREKTRAFQEKRVAAARRAGERL >Mature_229_residues SQPAEAPFRIVMLAYPRMTQLDLTGPFEVFARLPGARLEIVAESCKRPVVDVAGLGIMANASFNEVAGCELLFVPGGPGQ LELMDDGPALDFLRRMAVQARYVTSVCTGSLILGAAGLLTGYRATSHWLSLDQLALLGAIPVEERVVVDRNRFTGAGVSS GIDLALALAAEIAGEDEARRIALAIEYQPAPAFPPRDKEDPRLVAEVREKTRAFQEKRVAAARRAGERL
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24772; Mature: 24641
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPAEAPFRIVMLAYPRMTQLDLTGPFEVFARLPGARLEIVAESCKRPVVDVAGLGIMA CCCCCCCCEEEEEEECCCCEEEECCCHHHHHHHCCCCHHHHHHHHHCCCCCHHHCCCEEE NASFNEVAGCELLFVPGGPGQLELMDDGPALDFLRRMAVQARYVTSVCTGSLILGAAGLL CCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGYRATSHWLSLDQLALLGAIPVEERVVVDRNRFTGAGVSSGIDLALALAAEIAGEDEAR HCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCE RIALAIEYQPAPAFPPRDKEDPRLVAEVREKTRAFQEKRVAAARRAGERL EEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SQPAEAPFRIVMLAYPRMTQLDLTGPFEVFARLPGARLEIVAESCKRPVVDVAGLGIMA CCCCCCCEEEEEEECCCCEEEECCCHHHHHHHCCCCHHHHHHHHHCCCCCHHHCCCEEE NASFNEVAGCELLFVPGGPGQLELMDDGPALDFLRRMAVQARYVTSVCTGSLILGAAGLL CCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGYRATSHWLSLDQLALLGAIPVEERVVVDRNRFTGAGVSSGIDLALALAAEIAGEDEAR HCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCE RIALAIEYQPAPAFPPRDKEDPRLVAEVREKTRAFQEKRVAAARRAGERL EEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA