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The map label for this gene is rpe [H]

Identifier: 154245855

GI number: 154245855

Start: 2161174

End: 2161866

Strand: Reverse

Name: rpe [H]

Synonym: Xaut_1911

Alternate gene names: 154245855

Gene position: 2161866-2161174 (Counterclockwise)

Preceding gene: 154245856

Following gene: 154245852

Centisome position: 40.72

GC content: 66.23

Gene sequence:

>693_bases
ATGGCCCGCGCTTATCCCATCATCGCCCCGTCCATCCTCTCGGCCGATTTCACCCGCCTCGGCGCCGAGGTAGAGGCGGT
GCTTGAGGGCGGTGCGGAATGGATTCACTTCGACGTGATGGATAATCATTACGTCCCCAACCTCACCATCGGCCCGCTGG
TGCTGCAGTCCCTGCGCAAGGTGACCAAGGCCTTCGTGGACGTGCACCTGATGGTGAAGCCGGTGGACGGCATGATCGAG
GCCTTCGCGGGCGCCGGTGCCGACCTCATCTCCTTCCATCCGGAGGCCAGCGAGCATGTGGACCGCTCGCTCCAGCTCAT
CCGCTCCAAGGGGGTGAAGGCGGGACTGGTGCTCAATCCGGCGACGCCGCTCTCGGTGCTCGACTACACGCTGGACCAGC
TCGATCTGGTGCTGGTGATGTCGGTGAACCCCGGCTTCGGCGGGCAGGCCTTCATTCCCGGCGCCCTCGACAAGCTGAAG
GCCATCCGCGAACGCATCGACGCCTCGGGCCGCGACATTCGCCTTGAGATCGACGGCGGCGTGAAGGTGGACAATATCGG
CGCCATCGCGGCGGCCGGGGCCGACACCTTCGTGGCCGGCAGCGCCATCTACGGCGCCAAGGATTATGGCGCCACCATCG
CCGCCATGAAGCGCGAGATCGAAAGCGCCACGGGAACCGCCGCGGCGGCTTGA

Upstream 100 bases:

>100_bases
AGACGTGGATGGCCGGGTCAAGCCCGGCCACGACGGACTGTCGAGACGATGCGCGGGGCACTGCTTCCAGCTGCGCGCCA
AGATACTGCAGGAGACCCCC

Downstream 100 bases:

>100_bases
GCGGCGTCGGTTGAGCCGGGCCGCTGCCGCGTGGCCGGCCCGGGCAATGAAAACCGGTTCCGCGTGCGGGTGGGTCGCGT
AAGCCCTCGCATGCCCTGGT

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MARAYPIIAPSILSADFTRLGAEVEAVLEGGAEWIHFDVMDNHYVPNLTIGPLVLQSLRKVTKAFVDVHLMVKPVDGMIE
AFAGAGADLISFHPEASEHVDRSLQLIRSKGVKAGLVLNPATPLSVLDYTLDQLDLVLVMSVNPGFGGQAFIPGALDKLK
AIRERIDASGRDIRLEIDGGVKVDNIGAIAAAGADTFVAGSAIYGAKDYGATIAAMKREIESATGTAAAA

Sequences:

>Translated_230_residues
MARAYPIIAPSILSADFTRLGAEVEAVLEGGAEWIHFDVMDNHYVPNLTIGPLVLQSLRKVTKAFVDVHLMVKPVDGMIE
AFAGAGADLISFHPEASEHVDRSLQLIRSKGVKAGLVLNPATPLSVLDYTLDQLDLVLVMSVNPGFGGQAFIPGALDKLK
AIRERIDASGRDIRLEIDGGVKVDNIGAIAAAGADTFVAGSAIYGAKDYGATIAAMKREIESATGTAAAA
>Mature_229_residues
ARAYPIIAPSILSADFTRLGAEVEAVLEGGAEWIHFDVMDNHYVPNLTIGPLVLQSLRKVTKAFVDVHLMVKPVDGMIEA
FAGAGADLISFHPEASEHVDRSLQLIRSKGVKAGLVLNPATPLSVLDYTLDQLDLVLVMSVNPGFGGQAFIPGALDKLKA
IRERIDASGRDIRLEIDGGVKVDNIGAIAAAGADTFVAGSAIYGAKDYGATIAAMKREIESATGTAAAA

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=218, Percent_Identity=38.9908256880734, Blast_Score=158, Evalue=3e-39,
Organism=Homo sapiens, GI219879828, Length=213, Percent_Identity=38.0281690140845, Blast_Score=149, Evalue=3e-36,
Organism=Homo sapiens, GI24307923, Length=174, Percent_Identity=31.0344827586207, Blast_Score=89, Evalue=2e-18,
Organism=Escherichia coli, GI1789788, Length=215, Percent_Identity=67.906976744186, Blast_Score=302, Evalue=1e-83,
Organism=Escherichia coli, GI1790523, Length=199, Percent_Identity=38.6934673366834, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1790754, Length=210, Percent_Identity=32.3809523809524, Blast_Score=100, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17552948, Length=223, Percent_Identity=39.4618834080717, Blast_Score=164, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6322341, Length=228, Percent_Identity=39.4736842105263, Blast_Score=175, Evalue=5e-45,
Organism=Drosophila melanogaster, GI24586301, Length=216, Percent_Identity=40.2777777777778, Blast_Score=164, Evalue=6e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 24152; Mature: 24021

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARAYPIIAPSILSADFTRLGAEVEAVLEGGAEWIHFDVMDNHYVPNLTIGPLVLQSLRK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH
VTKAFVDVHLMVKPVDGMIEAFAGAGADLISFHPEASEHVDRSLQLIRSKGVKAGLVLNP
HHHHHHHHEEEEECHHHHHHHHHCCCCHHEEECCCHHHHHHHHHHHHHHCCCCEEEEECC
ATPLSVLDYTLDQLDLVLVMSVNPGFGGQAFIPGALDKLKAIRERIDASGRDIRLEIDGG
CCCHHHHHHHHHCEEEEEEEEECCCCCCCEECCHHHHHHHHHHHHHCCCCCEEEEEECCC
VKVDNIGAIAAAGADTFVAGSAIYGAKDYGATIAAMKREIESATGTAAAA
EEECCCCEEEECCCCHHEECCEEECCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ARAYPIIAPSILSADFTRLGAEVEAVLEGGAEWIHFDVMDNHYVPNLTIGPLVLQSLRK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH
VTKAFVDVHLMVKPVDGMIEAFAGAGADLISFHPEASEHVDRSLQLIRSKGVKAGLVLNP
HHHHHHHHEEEEECHHHHHHHHHCCCCHHEEECCCHHHHHHHHHHHHHHCCCCEEEEECC
ATPLSVLDYTLDQLDLVLVMSVNPGFGGQAFIPGALDKLKAIRERIDASGRDIRLEIDGG
CCCHHHHHHHHHCEEEEEEEEECCCCCCCEECCHHHHHHHHHHHHHCCCCCEEEEEECCC
VKVDNIGAIAAAGADTFVAGSAIYGAKDYGATIAAMKREIESATGTAAAA
EEECCCCEEEECCCCHHEECCEEECCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]