| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245843
Identifier: 154245843
GI number: 154245843
Start: 2140637
End: 2141386
Strand: Reverse
Name: 154245843
Synonym: Xaut_1899
Alternate gene names: NA
Gene position: 2141386-2140637 (Counterclockwise)
Preceding gene: 154245844
Following gene: 154245842
Centisome position: 40.34
GC content: 67.73
Gene sequence:
>750_bases ATGACCCTTCCTGTGATCAACCCGTTTCCCGGCACGTCGTCTTCCGCCTTCGACGCGGTGGACACCTGGGTGTTCGACCT CGACAACACCCTCTATCCCGCCCACCACGATCTGTGGTTCCAGATCGATGCCCGCATGAAGGGCTACATCTCGGATCTGC TGGGCATCCCGCCCGACGACGCCTTCCGCATCCAGAAGGACTATTACCGCCGCTACGGCACCTCCCTGCGCGGCCTGATG ATCGAGCACGGGGTGGAGCCGGACGCCTTCCTCGCCCACGTGCACGACGTGGACCTGTCGGGGCTCGACGCGTCGCCACG CCTTGCCGCCGCCATCGAGGCGCTGCCAGGGGCGAAGATCGTCTACACCAACGGCTCGGAGCGCCACGCCCGCAACGTGC TGGAAAAGCTGGGCATCGATGCCCATTTCGCCGCCGTGCACGACATCGTGGCCGCCGAATTCCACCCCAAGCCCACCGAG GAAGCCTACCTGCGCTTCCTCAGGGCCCACGGGGTGGACCCGACCCGCTCGGCCATGTTCGAGGACCTCGCCCGCAACCT CGAGGTGCCGCACCGGCTGGGCATGGTGACCGTGCTGGTGGTGCCGCCGGACGAGACCATCGCCGCCCGCGAGACCTGGG AGTTCGAGGGCCGCGAGGACGCCTATGTGGACCACATCACCGAGGACCTCGCCGGCTTCCTCGAAACCGTGGCGCGGACG GCCCCGCCGCCGGTCAATGAGCCGGACTAG
Upstream 100 bases:
>100_bases GGTGTTTCGCGCAAGTCGCGAGGTGCCTCGTCCGTTTCAACGCGTCTTCTTCCCGTGCGCGCGTCCGCGCAGGTCGAAGA CGATCAAGTCGCGGCGCCCC
Downstream 100 bases:
>100_bases GAGGAAGGACCCAAGACCTTGACGGCAGAGGGGGACGCCATGACCACCACCATCCGCACCCTAGATCCCGCCGAGGTCGA AACCGCGGTGGATTGGGCCG
Product: pyrimidine 5'-nucleotidase
Products: NA
Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; HAD Family Pyrimidine 5-Nucleotidase; HAD Superfamily Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; HAD Family Hydrolase; Phosphatase; Hydrolase Protein; HAD Superfamily Protein; Haloacid Dehalogenase Superfamily Hydrolase; Haloacid Dehalogenase; Phosphoglycolate Phosphatase; Hydrolase Ripening-Related Protein-Like; Haloacid Dehalogenase-Like Hydrolase Family Protein; Hydrolase Of HAD Superfamily
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MTLPVINPFPGTSSSAFDAVDTWVFDLDNTLYPAHHDLWFQIDARMKGYISDLLGIPPDDAFRIQKDYYRRYGTSLRGLM IEHGVEPDAFLAHVHDVDLSGLDASPRLAAAIEALPGAKIVYTNGSERHARNVLEKLGIDAHFAAVHDIVAAEFHPKPTE EAYLRFLRAHGVDPTRSAMFEDLARNLEVPHRLGMVTVLVVPPDETIAARETWEFEGREDAYVDHITEDLAGFLETVART APPPVNEPD
Sequences:
>Translated_249_residues MTLPVINPFPGTSSSAFDAVDTWVFDLDNTLYPAHHDLWFQIDARMKGYISDLLGIPPDDAFRIQKDYYRRYGTSLRGLM IEHGVEPDAFLAHVHDVDLSGLDASPRLAAAIEALPGAKIVYTNGSERHARNVLEKLGIDAHFAAVHDIVAAEFHPKPTE EAYLRFLRAHGVDPTRSAMFEDLARNLEVPHRLGMVTVLVVPPDETIAARETWEFEGREDAYVDHITEDLAGFLETVART APPPVNEPD >Mature_248_residues TLPVINPFPGTSSSAFDAVDTWVFDLDNTLYPAHHDLWFQIDARMKGYISDLLGIPPDDAFRIQKDYYRRYGTSLRGLMI EHGVEPDAFLAHVHDVDLSGLDASPRLAAAIEALPGAKIVYTNGSERHARNVLEKLGIDAHFAAVHDIVAAEFHPKPTEE AYLRFLRAHGVDPTRSAMFEDLARNLEVPHRLGMVTVLVVPPDETIAARETWEFEGREDAYVDHITEDLAGFLETVARTA PPPVNEPD
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27750; Mature: 27619
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPVINPFPGTSSSAFDAVDTWVFDLDNTLYPAHHDLWFQIDARMKGYISDLLGIPPDD CCCCCCCCCCCCCCCHHHHHHHHHEECCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCH AFRIQKDYYRRYGTSLRGLMIEHGVEPDAFLAHVHDVDLSGLDASPRLAAAIEALPGAKI HHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEE VYTNGSERHARNVLEKLGIDAHFAAVHDIVAAEFHPKPTEEAYLRFLRAHGVDPTRSAMF EEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHH EDLARNLEVPHRLGMVTVLVVPPDETIAARETWEFEGREDAYVDHITEDLAGFLETVART HHHHHCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC APPPVNEPD CCCCCCCCC >Mature Secondary Structure TLPVINPFPGTSSSAFDAVDTWVFDLDNTLYPAHHDLWFQIDARMKGYISDLLGIPPDD CCCCCCCCCCCCCCHHHHHHHHHEECCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCH AFRIQKDYYRRYGTSLRGLMIEHGVEPDAFLAHVHDVDLSGLDASPRLAAAIEALPGAKI HHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEE VYTNGSERHARNVLEKLGIDAHFAAVHDIVAAEFHPKPTEEAYLRFLRAHGVDPTRSAMF EEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHH EDLARNLEVPHRLGMVTVLVVPPDETIAARETWEFEGREDAYVDHITEDLAGFLETVART HHHHHCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC APPPVNEPD CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA