| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245844
Identifier: 154245844
GI number: 154245844
Start: 2141532
End: 2141930
Strand: Reverse
Name: 154245844
Synonym: Xaut_1900
Alternate gene names: NA
Gene position: 2141930-2141532 (Counterclockwise)
Preceding gene: 154245845
Following gene: 154245843
Centisome position: 40.35
GC content: 69.67
Gene sequence:
>399_bases ATGTCTCTCGCACGCATGTCTCTCTCACTCGCCTGGCTTCTGCCCATCCGCCTGCGGTCCGCCCTCGTCCCAGCGATGCT GGCCGCGACGGTTCTCGCCCTCGCCCCGGCCGCGGCGGCAAGCTTCGACTGCGCCAGCGCTCGCGCGGCCGACGAAAAGG CGATCTGCGACAGCTGCGACCTCGCCCAGCTCGATGTGAAGATGTCCACCCTCTATGGCGTCCTCACCAAGCTGGTCGCC ATGGGCCAGCGCGGCATGATCCAGGACGCGCAGCGGGCCTGGCTGGCGCAGCGCTCCACCTGCGGCGGCGATACCTCCTG CCTCTCCGGGGCCTACAGGAGCCGGATCGCCCAGCTGGAAGCCGCGCTGGGCGAGATCTATTCCCGCGGCCCCTTCTGA
Upstream 100 bases:
>100_bases GCCAAGGTGGTGCGCTCCGGGCGGGTGGCCGTGGGCGACACGGTGACCCTCGCCTGACCGGGCCACACCGACCAAACCCC ATCCAAGGAGAGGAAACGCC
Downstream 100 bases:
>100_bases GGCATTCTGTGGCCCGCCGAGCGGGTGCGGCGGTCCATTCACGAGGGTGTTTCGCGCAAGTCGCGAGGTGCCTCGTCCGT TTCAACGCGTCTTCTTCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSLARMSLSLAWLLPIRLRSALVPAMLAATVLALAPAAAASFDCASARAADEKAICDSCDLAQLDVKMSTLYGVLTKLVA MGQRGMIQDAQRAWLAQRSTCGGDTSCLSGAYRSRIAQLEAALGEIYSRGPF
Sequences:
>Translated_132_residues MSLARMSLSLAWLLPIRLRSALVPAMLAATVLALAPAAAASFDCASARAADEKAICDSCDLAQLDVKMSTLYGVLTKLVA MGQRGMIQDAQRAWLAQRSTCGGDTSCLSGAYRSRIAQLEAALGEIYSRGPF >Mature_131_residues SLARMSLSLAWLLPIRLRSALVPAMLAATVLALAPAAAASFDCASARAADEKAICDSCDLAQLDVKMSTLYGVLTKLVAM GQRGMIQDAQRAWLAQRSTCGGDTSCLSGAYRSRIAQLEAALGEIYSRGPF
Specific function: Unknown
COG id: COG4461
COG function: function code S; Uncharacterized protein conserved in bacteria, putative lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13927; Mature: 13796
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLARMSLSLAWLLPIRLRSALVPAMLAATVLALAPAAAASFDCASARAADEKAICDSCD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHCCCCC LAQLDVKMSTLYGVLTKLVAMGQRGMIQDAQRAWLAQRSTCGGDTSCLSGAYRSRIAQLE HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH AALGEIYSRGPF HHHHHHHHCCCC >Mature Secondary Structure SLARMSLSLAWLLPIRLRSALVPAMLAATVLALAPAAAASFDCASARAADEKAICDSCD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHCCCCC LAQLDVKMSTLYGVLTKLVAMGQRGMIQDAQRAWLAQRSTCGGDTSCLSGAYRSRIAQLE HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH AALGEIYSRGPF HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA