| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245836
Identifier: 154245836
GI number: 154245836
Start: 2131029
End: 2131472
Strand: Reverse
Name: 154245836
Synonym: Xaut_1892
Alternate gene names: NA
Gene position: 2131472-2131029 (Counterclockwise)
Preceding gene: 154245837
Following gene: 154245831
Centisome position: 40.15
GC content: 71.85
Gene sequence:
>444_bases ATGAGTATCGAAGACGAGGCCCGCACGCTCGCCCGCATCCCCATGTTCCGCGACCTGGAGCCGAGCCAGCTGCGGCTGCT CGCCTTCTCGGCGGCGCGGCTCGATGTGGCGCCGGGCGACGTGCTGTTCACCCAGGGCGAGGCGCCCGACGCCGCCTATG TGGTGCTTGAGGGCACCGCGGTGATCGAGGTGGCGGCGGGCGGCGCAGCCCATGAGGTGGCGCGGCTCGGCCGCGACACG GTGGTGGGCGAGATGGGCGTGCTCACCGGCGAGCCGCGCACCGCCACGGTGCGGGCCGGCGAGCCCATGAGCGTGCTGCG CATGGAGACCGACCTGTTCCTGAACCTCCTGGACAAGACTCCGTCGCTGGCCCGCTCGGTGCTGCGCGACCTCGCCTTTC GCCTGCAGGAGACCACGCAGGCCCTGGTAAAGGCGAGAGGGTGA
Upstream 100 bases:
>100_bases ATCAGGACGTGTGGACATCCGGGGCGCCCCACAGGGGGCGAGATCCCGTTGCAGGAGGGATGCCGCAAGTGCCCGCAAGG CACGGGGGCATCATAGACCC
Downstream 100 bases:
>100_bases CGGTGAGAGGGTAAGGGGGCTCGGCTTCAGCCGCGCCGGCGCAGGATCTTGAGGCGCCCCAGCAGTTCGGCCACCGCCTC CGGCGGCAGGTGGCTGATCT
Product: cyclic nucleotide-binding protein
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator Crp/Fnr Family
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSIEDEARTLARIPMFRDLEPSQLRLLAFSAARLDVAPGDVLFTQGEAPDAAYVVLEGTAVIEVAAGGAAHEVARLGRDT VVGEMGVLTGEPRTATVRAGEPMSVLRMETDLFLNLLDKTPSLARSVLRDLAFRLQETTQALVKARG
Sequences:
>Translated_147_residues MSIEDEARTLARIPMFRDLEPSQLRLLAFSAARLDVAPGDVLFTQGEAPDAAYVVLEGTAVIEVAAGGAAHEVARLGRDT VVGEMGVLTGEPRTATVRAGEPMSVLRMETDLFLNLLDKTPSLARSVLRDLAFRLQETTQALVKARG >Mature_146_residues SIEDEARTLARIPMFRDLEPSQLRLLAFSAARLDVAPGDVLFTQGEAPDAAYVVLEGTAVIEVAAGGAAHEVARLGRDTV VGEMGVLTGEPRTATVRAGEPMSVLRMETDLFLNLLDKTPSLARSVLRDLAFRLQETTQALVKARG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15790; Mature: 15659
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00889 CNMP_BINDING_2 ; PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIEDEARTLARIPMFRDLEPSQLRLLAFSAARLDVAPGDVLFTQGEAPDAAYVVLEGTA CCCCHHHHHHHHCCCCCCCCHHHEEEEEEEHHEEECCCCCEEEECCCCCCEEEEEEECCE VIEVAAGGAAHEVARLGRDTVVGEMGVLTGEPRTATVRAGEPMSVLRMETDLFLNLLDKT EEEEECCCCHHHHHHCCCHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCC PSLARSVLRDLAFRLQETTQALVKARG HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SIEDEARTLARIPMFRDLEPSQLRLLAFSAARLDVAPGDVLFTQGEAPDAAYVVLEGTA CCCHHHHHHHHCCCCCCCCHHHEEEEEEEHHEEECCCCCEEEECCCCCCEEEEEEECCE VIEVAAGGAAHEVARLGRDTVVGEMGVLTGEPRTATVRAGEPMSVLRMETDLFLNLLDKT EEEEECCCCHHHHHHCCCHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCC PSLARSVLRDLAFRLQETTQALVKARG HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA