| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is mdlB [C]
Identifier: 154245837
GI number: 154245837
Start: 2131642
End: 2134305
Strand: Reverse
Name: mdlB [C]
Synonym: Xaut_1893
Alternate gene names: 154245837
Gene position: 2134305-2131642 (Counterclockwise)
Preceding gene: 154245838
Following gene: 154245836
Centisome position: 40.2
GC content: 70.98
Gene sequence:
>2664_bases ATGAGCGGCGTGCCTTCCACCCCTCCTGACAGCAAGACACACGCTCCGGCCCGGCAGGGCGCGGCATCCAATGGCGCCCT GCCCCGCGACGTGCTCAGCTACCTCTGGAGAGTGGCTCCGGCGAGCCATATCAAGCTGTTCGCCCTCGTCCTGCTGCTGC TGCCCTTCAACTATGCCTCGCTGGAACTGCCGCGCCTCATCGTCAACGGCGTGACCGACGCCATCGGCGGCACGGTTCCG CGCCTGCTCGAGCTCGACATCGGCCTGCCCGACGCACTGGGCGGCTTCGTGCTGTTCCGCTCGAAGGGCTTCGAGGTGAG CGCCTTCGGTCTGCTCGCCGGGCTCGCGCTGGTGCTGTTCGCGCTCCAGCTGATCCAGCAGCACATCACCCGCCTGATCG AGATGGCGAAGGCGCGGCTTGGCGAGCGCATCATCGTCGGCCTCAGGCGGCAGCTGTTCGACGTGATCCAGCGGCTGCGG CCGGAAGCGCCCATGAAGAGCAAGGCGCTGGAAGTAGGCAACATGATGCGGTTCGAGGTGGGGCCCATCTCCCCCTTCGC CGGCATGGCCTTCGCCCAGCCGCTGAAGTCCGCCGGCCTGATCGGCTCGGCGACCCTGCTCATCTTCACCCAGAACGCGG TGCTGGGTGGCTTCGCCATCGGCATCCTGGTGCTGAATTATGTGCTGCTGGGCATCCAGCGGGCAGACAATGCGCGCAAG CTGCAAGTCTACCAGCGCGAGGCGGTGGCGCTGGGCAAACGGGTGATGGCGGGCATCGACCGCCTGCCCCTCGTCCACGG CTTCGCCACCAGCCCGTTCGAGCGCGGCGCGGTGGACCACCGCCTTGGCGTCGTCTCCGAGGCCAGCCTCGACCTCAAAC GGCAGAATTTCACCGACCGGGTGCTGAACCTGCTGATGTCGGACGTGCCGACGCTGGTGTTCTACTCCGTCGGCGGCTGG CTGGCCCTGTCGGGGGCCATCAACATCGGCCAGCTGGTGGCGGTGGTGGCGGCCTATGGCCAGATCCCCGAGCCGCTGAA GGAGCTGATCGACTGGGACGAGAAGCGCCTGATCGCCCAGGTGCGCTACGATTTCGCCCGCTATTACCTTGAAACCCGGG AGGTCTGGCCGCAGGGCTCGCAGGAGCTGCCGCCCGGTCCGGAACCGGCCTTCGACGGCAGCCTCAAGGTGGCGGACCTC GGCGTGGTGGACCCGGCCGGCAGCCTGTTGCTGGAAAGCGTGAGTTTCGAGGTGCCCCCCGGCACGGCGGTGGCGCTGAA GGGACCCGATGCCGGCGGCAAGCATGCGGTGGCGCGCGTCTGCGGCCGCGCCATCTCGCTCTACAGCGGCACCGTGCGCA TGGGCGGGCACGATCTCGCCCATGTCCCGGAGGCCGTGGTGGGGCGGCACGTGGCCTATGCGGGCGGCGACCCCATCGTC ATCACCGGCACGCTGCGCACCAACCTTCTGTTCGCGCTGGAGCGCCGGCCGGGCCGCGCCCTGACGGAGGCCGTGGACCT CGCCGCCCTCGGCCTTGCCGACGAGGCGGCGCTCGACCGCAAGGCGCTTGCCGCCCTCGCCGGGGCCGGGCTGGGGGATC TCGTGGTGCGGCTCGGCCTGGAGCGGCGGCTTGATCCGGACCAGGCCCCGGCGCTCGCGGAGCGCATCGTGTCCCTGCGC GCGGCGGTCACCGATGCCGTCGCCCAGCGGCAGGCGCAGAGCGGGCGGATGCTGATCGAGCCGTTCCGCTTCGCCGCATT CAACCGCTGGATGACGCTGGCCGAGAACATCCTGTTCGCCACCCCGCTGAACGACACCCGTGGCGCCGCTTCCCTGCTGG CCGAGCCGGCGCTGTTGCCGCTGCTGGAGAAGGCCGGGCTCGCGGCTGACCTGATCGCGCTGGGCCGTTCCGCCCTGCGC ATCCTGTCCGAGCTGGCCGGCGGTCCCGAGGACCTCGCCGGGATCGACACCAAGGGCCTGCTGCGCGCAGAGGAGATGGG CGAGGCCCGCGCGCTCGCCACCCGGATCGAGGATGACCCCTCGGCGGACGAGCGGGGGCTGCTGCTGCGCATCGCCGGCC GCTATTGCGAGCCGCGCCACCGCTTCGGCCTCATCGACGAGGACTGGCAGGACCGGGCGCTGGCCGGCCGCGCCCAGCTT GCGCACCTGAAGGACGTGTCGGGCATCGCCCTCGCCCGCTACCAGCCCGACAGCTATTGCCGGGCACTGACGGTGCGCGA CAATCTGCTGTTCGGCCGCATCGCCGCCGATCGGGCCGGCGCCGCGGCGGTGGTGGACGAGATCGTCCGCGAATGCTTGG CGCAGGATGCCCTGATCGGCCAGGTGGAACGCCTCAGCCTCGACGTGGCGGTGGGCGAAGGCGGCCTGCCCCTGTCGGCG GCGGAGCGCGGCAAGCTCACGCTGGCGCGCTGCCTTCTGGCCGACCCCGCCATCCTCGTCATCGACGATGCGCTAGTGCC CCTGTCGCCGGCCGAGCAGAGCCAGCTCATCGGCTCGGTGCTGGGGGGGCGGACGGGACGCACCACCCTGGTGGTGCTGG ATGCCGGCGAGCCGCTCGACCTGTTCGCGCAGGTGATCGTGCTTGCCCACGGACAGGTGGAGCGGGTGGAGGCCGGGGTG GGGCTGGCCGCCGTGGGCGCATGA
Upstream 100 bases:
>100_bases TGCCTCCACCACCCCGACGCCTGCCGGAAGCATCAACTAGAGCGTATCCTTGGGCCGCTTCGCGCTTGCAAAGCGGCCGT TGCGTCAGCAAAACGGTTAC
Downstream 100 bases:
>100_bases GCCTGAAAAGAAGAGAGTTTCACGTAACGAAAACGCGCTAAAATGCCCGCCCGGAGGTTCCCACGTTTCATCAGGACGTG TGGACATCCGGGGCGCCCCA
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: ABC Transporter Permease Protein; ABC Transporter-Like Protein; ABC Transporter; ABC Transporter Transmembrane Region; Multidrug ABC Transporter; Multidrug ABC Transporter ATPase/Permease-Like Protein; ATPase; ATPase Family Protein; Multidrug Resistance Protein; Type I Secretion System ATPase; Transmembrane ABC Transporter Component; ABC Transporter Subunit
Number of amino acids: Translated: 887; Mature: 886
Protein sequence:
>887_residues MSGVPSTPPDSKTHAPARQGAASNGALPRDVLSYLWRVAPASHIKLFALVLLLLPFNYASLELPRLIVNGVTDAIGGTVP RLLELDIGLPDALGGFVLFRSKGFEVSAFGLLAGLALVLFALQLIQQHITRLIEMAKARLGERIIVGLRRQLFDVIQRLR PEAPMKSKALEVGNMMRFEVGPISPFAGMAFAQPLKSAGLIGSATLLIFTQNAVLGGFAIGILVLNYVLLGIQRADNARK LQVYQREAVALGKRVMAGIDRLPLVHGFATSPFERGAVDHRLGVVSEASLDLKRQNFTDRVLNLLMSDVPTLVFYSVGGW LALSGAINIGQLVAVVAAYGQIPEPLKELIDWDEKRLIAQVRYDFARYYLETREVWPQGSQELPPGPEPAFDGSLKVADL GVVDPAGSLLLESVSFEVPPGTAVALKGPDAGGKHAVARVCGRAISLYSGTVRMGGHDLAHVPEAVVGRHVAYAGGDPIV ITGTLRTNLLFALERRPGRALTEAVDLAALGLADEAALDRKALAALAGAGLGDLVVRLGLERRLDPDQAPALAERIVSLR AAVTDAVAQRQAQSGRMLIEPFRFAAFNRWMTLAENILFATPLNDTRGAASLLAEPALLPLLEKAGLAADLIALGRSALR ILSELAGGPEDLAGIDTKGLLRAEEMGEARALATRIEDDPSADERGLLLRIAGRYCEPRHRFGLIDEDWQDRALAGRAQL AHLKDVSGIALARYQPDSYCRALTVRDNLLFGRIAADRAGAAAVVDEIVRECLAQDALIGQVERLSLDVAVGEGGLPLSA AERGKLTLARCLLADPAILVIDDALVPLSPAEQSQLIGSVLGGRTGRTTLVVLDAGEPLDLFAQVIVLAHGQVERVEAGV GLAAVGA
Sequences:
>Translated_887_residues MSGVPSTPPDSKTHAPARQGAASNGALPRDVLSYLWRVAPASHIKLFALVLLLLPFNYASLELPRLIVNGVTDAIGGTVP RLLELDIGLPDALGGFVLFRSKGFEVSAFGLLAGLALVLFALQLIQQHITRLIEMAKARLGERIIVGLRRQLFDVIQRLR PEAPMKSKALEVGNMMRFEVGPISPFAGMAFAQPLKSAGLIGSATLLIFTQNAVLGGFAIGILVLNYVLLGIQRADNARK LQVYQREAVALGKRVMAGIDRLPLVHGFATSPFERGAVDHRLGVVSEASLDLKRQNFTDRVLNLLMSDVPTLVFYSVGGW LALSGAINIGQLVAVVAAYGQIPEPLKELIDWDEKRLIAQVRYDFARYYLETREVWPQGSQELPPGPEPAFDGSLKVADL GVVDPAGSLLLESVSFEVPPGTAVALKGPDAGGKHAVARVCGRAISLYSGTVRMGGHDLAHVPEAVVGRHVAYAGGDPIV ITGTLRTNLLFALERRPGRALTEAVDLAALGLADEAALDRKALAALAGAGLGDLVVRLGLERRLDPDQAPALAERIVSLR AAVTDAVAQRQAQSGRMLIEPFRFAAFNRWMTLAENILFATPLNDTRGAASLLAEPALLPLLEKAGLAADLIALGRSALR ILSELAGGPEDLAGIDTKGLLRAEEMGEARALATRIEDDPSADERGLLLRIAGRYCEPRHRFGLIDEDWQDRALAGRAQL AHLKDVSGIALARYQPDSYCRALTVRDNLLFGRIAADRAGAAAVVDEIVRECLAQDALIGQVERLSLDVAVGEGGLPLSA AERGKLTLARCLLADPAILVIDDALVPLSPAEQSQLIGSVLGGRTGRTTLVVLDAGEPLDLFAQVIVLAHGQVERVEAGV GLAAVGA >Mature_886_residues SGVPSTPPDSKTHAPARQGAASNGALPRDVLSYLWRVAPASHIKLFALVLLLLPFNYASLELPRLIVNGVTDAIGGTVPR LLELDIGLPDALGGFVLFRSKGFEVSAFGLLAGLALVLFALQLIQQHITRLIEMAKARLGERIIVGLRRQLFDVIQRLRP EAPMKSKALEVGNMMRFEVGPISPFAGMAFAQPLKSAGLIGSATLLIFTQNAVLGGFAIGILVLNYVLLGIQRADNARKL QVYQREAVALGKRVMAGIDRLPLVHGFATSPFERGAVDHRLGVVSEASLDLKRQNFTDRVLNLLMSDVPTLVFYSVGGWL ALSGAINIGQLVAVVAAYGQIPEPLKELIDWDEKRLIAQVRYDFARYYLETREVWPQGSQELPPGPEPAFDGSLKVADLG VVDPAGSLLLESVSFEVPPGTAVALKGPDAGGKHAVARVCGRAISLYSGTVRMGGHDLAHVPEAVVGRHVAYAGGDPIVI TGTLRTNLLFALERRPGRALTEAVDLAALGLADEAALDRKALAALAGAGLGDLVVRLGLERRLDPDQAPALAERIVSLRA AVTDAVAQRQAQSGRMLIEPFRFAAFNRWMTLAENILFATPLNDTRGAASLLAEPALLPLLEKAGLAADLIALGRSALRI LSELAGGPEDLAGIDTKGLLRAEEMGEARALATRIEDDPSADERGLLLRIAGRYCEPRHRFGLIDEDWQDRALAGRAQLA HLKDVSGIALARYQPDSYCRALTVRDNLLFGRIAADRAGAAAVVDEIVRECLAQDALIGQVERLSLDVAVGEGGLPLSAA ERGKLTLARCLLADPAILVIDDALVPLSPAEQSQLIGSVLGGRTGRTTLVVLDAGEPLDLFAQVIVLAHGQVERVEAGVG LAAVGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94329; Mature: 94198
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS50893 ABC_TRANSPORTER_2 ; PS50929 ABC_TM1F ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGVPSTPPDSKTHAPARQGAASNGALPRDVLSYLWRVAPASHIKLFALVLLLLPFNYAS CCCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCH LELPRLIVNGVTDAIGGTVPRLLELDIGLPDALGGFVLFRSKGFEVSAFGLLAGLALVLF HHHHHHHHHHHHHHHCCCCCHHHEECCCCCHHHCCEEEEECCCCCCHHHHHHHHHHHHHH ALQLIQQHITRLIEMAKARLGERIIVGLRRQLFDVIQRLRPEAPMKSKALEVGNMMRFEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCEEEEEC GPISPFAGMAFAQPLKSAGLIGSATLLIFTQNAVLGGFAIGILVLNYVLLGIQRADNARK CCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHH LQVYQREAVALGKRVMAGIDRLPLVHGFATSPFERGAVDHRLGVVSEASLDLKRQNFTDR HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHCCCCHHHHHHHHCCHHHH VLNLLMSDVPTLVFYSVGGWLALSGAINIGQLVAVVAAYGQIPEPLKELIDWDEKRLIAQ HHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHH VRYDFARYYLETREVWPQGSQELPPGPEPAFDGSLKVADLGVVDPAGSLLLESVSFEVPP HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCC GTAVALKGPDAGGKHAVARVCGRAISLYSGTVRMGGHDLAHVPEAVVGRHVAYAGGDPIV CCEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEECCCCHHHCCHHHHCCCEEEECCCCEE ITGTLRTNLLFALERRPGRALTEAVDLAALGLADEAALDRKALAALAGAGLGDLVVRLGL EEEEHHHCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH ERRLDPDQAPALAERIVSLRAAVTDAVAQRQAQSGRMLIEPFRFAAFNRWMTLAENILFA HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHEEEE TPLNDTRGAASLLAEPALLPLLEKAGLAADLIALGRSALRILSELAGGPEDLAGIDTKGL CCCCCCHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHH LRAEEMGEARALATRIEDDPSADERGLLLRIAGRYCEPRHRFGLIDEDWQDRALAGRAQL HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHH AHLKDVSGIALARYQPDSYCRALTVRDNLLFGRIAADRAGAAAVVDEIVRECLAQDALIG HHHHCCCCEEEEEECCHHHHEEEEEECCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHC QVERLSLDVAVGEGGLPLSAAERGKLTLARCLLADPAILVIDDALVPLSPAEQSQLIGSV CHHHEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHH LGGRTGRTTLVVLDAGEPLDLFAQVIVLAHGQVERVEAGVGLAAVGA HCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHCCCCEEECCC >Mature Secondary Structure SGVPSTPPDSKTHAPARQGAASNGALPRDVLSYLWRVAPASHIKLFALVLLLLPFNYAS CCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCH LELPRLIVNGVTDAIGGTVPRLLELDIGLPDALGGFVLFRSKGFEVSAFGLLAGLALVLF HHHHHHHHHHHHHHHCCCCCHHHEECCCCCHHHCCEEEEECCCCCCHHHHHHHHHHHHHH ALQLIQQHITRLIEMAKARLGERIIVGLRRQLFDVIQRLRPEAPMKSKALEVGNMMRFEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCEEEEEC GPISPFAGMAFAQPLKSAGLIGSATLLIFTQNAVLGGFAIGILVLNYVLLGIQRADNARK CCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHH LQVYQREAVALGKRVMAGIDRLPLVHGFATSPFERGAVDHRLGVVSEASLDLKRQNFTDR HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHCCCCHHHHHHHHCCHHHH VLNLLMSDVPTLVFYSVGGWLALSGAINIGQLVAVVAAYGQIPEPLKELIDWDEKRLIAQ HHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHH VRYDFARYYLETREVWPQGSQELPPGPEPAFDGSLKVADLGVVDPAGSLLLESVSFEVPP HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCC GTAVALKGPDAGGKHAVARVCGRAISLYSGTVRMGGHDLAHVPEAVVGRHVAYAGGDPIV CCEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEECCCCHHHCCHHHHCCCEEEECCCCEE ITGTLRTNLLFALERRPGRALTEAVDLAALGLADEAALDRKALAALAGAGLGDLVVRLGL EEEEHHHCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH ERRLDPDQAPALAERIVSLRAAVTDAVAQRQAQSGRMLIEPFRFAAFNRWMTLAENILFA HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHEEEE TPLNDTRGAASLLAEPALLPLLEKAGLAADLIALGRSALRILSELAGGPEDLAGIDTKGL CCCCCCHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHH LRAEEMGEARALATRIEDDPSADERGLLLRIAGRYCEPRHRFGLIDEDWQDRALAGRAQL HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHH AHLKDVSGIALARYQPDSYCRALTVRDNLLFGRIAADRAGAAAVVDEIVRECLAQDALIG HHHHCCCCEEEEEECCHHHHEEEEEECCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHC QVERLSLDVAVGEGGLPLSAAERGKLTLARCLLADPAILVIDDALVPLSPAEQSQLIGSV CHHHEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHH LGGRTGRTTLVVLDAGEPLDLFAQVIVLAHGQVERVEAGVGLAAVGA HCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA