Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is yjeS [H]

Identifier: 154245753

GI number: 154245753

Start: 2036618

End: 2037775

Strand: Direct

Name: yjeS [H]

Synonym: Xaut_1809

Alternate gene names: 154245753

Gene position: 2036618-2037775 (Clockwise)

Preceding gene: 154245752

Following gene: 154245754

Centisome position: 38.36

GC content: 69.78

Gene sequence:

>1158_bases
CTGACCGAGACGGCCGGCACGCCCCTCGAGGAGATCATCGCCGGCCTCGCCCGCACGGAAGGCTTCGATACCGTCGGCAT
CACCCGTGCCGATGCCATCCCTCAGGCCGGCGCCCGGCTGAAGGATTGGGTGGCCGGCGGCGCCCATGGCGACATGGGCT
GGATGGCCGAGACGCTGGAGCGCCGCGCGGATCCGGCCGTACTGTGGCCAGCCATCCGCTCCGTGATCATGCTGGGGCTC
AATTACGGCCCGGCGGACGACCCCCGCGCGGTGCTGGCCCAACGCTCGGCCGGCGCCATCTCCGTCTATGCGCGGGCGGA
GGATTACCACGACATCATCAAGCCCAAGCTGAAGCGCGTCGCCCGAGCCCTGCTGGCCGAGGCGCAGCGACGCGGGCTGG
ACGGCGACGTGAAAGTGTTCGTGGATACTGCCCCGCTCATGGAGAAGCCGCTGGCGGCGGCGGCTGGGCTGGGCTGGCAG
GGCCGGCACACCAACCTGGTCTCGCGGGATTTCGGCTCCTGGCTGTTCCTGGGCGCCATCGCCACCACGGTGGAGCTGAA
GCCCTCCGCCCCGGAACAGGATCATTGCGGCTCCTGCCGCGCCTGTCTCGACGCCTGCCCAACGGCGGCCTTTCCCGCCC
CTTACGTCATCGATGCGCGGCGCTGCGTGTCCTACCTCACCATCGAGCACAAGGGGCCGATCCCGCGCGAGCTGCGTCCA
CTTATGGGCAACCGCATCTATGGCTGCGACGATTGCCTCGCCGCCTGCCCGTGGAACAAGTTCGCCGAGCTCGGGCGGGA
AGTGAAGCTCGCGGCGCGGGCGGAGAATGACGCCCCGCCCCTGGCCGAACTGGTTGCGCTGGACGATGCCGCCTTCCGCG
CCCGCTTCCCCAAAAGCCCCATCAAGCGGGTGGGGCGCGACCGTTTTGTGCGCAACGTGCTGGTGGCCATGGGAAATTCT
GGGGATGCGGCACTATTGCCCCAGGTGGAGGCGCGGCTTGGCGATGCCTCGGCGCTGGTGCGCGGGGCGGCGGTGTGGGC
ACTGGGGCAGCTAGCTGATCCAGATACCGTCTTCCGCCGCGCCCGTGAGGCCCTGCCGCAGGAAGACGACGCAGTGGTGC
GAGCGGAATGGGCCGCCGCATCGGTGGAACAGCCCTAA

Upstream 100 bases:

>100_bases
ACTGGTACGCGCGGATCAAGTCGCGCCCGACCTTCCGCGCCCTGCTGAACGAGAGCATTCCGGGCATGCCGCCGTCCAAG
ACCTACGCGGACCTCGACTT

Downstream 100 bases:

>100_bases
GTTCCGCAGCTGGTCGCGCCGGCGCTGTTTCCAACCGGCGCGTTTGCCGGTAGGATTGCCACCTCACGAACCATGAAGGG
GGCGACAAGAGCTGGCGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MTETAGTPLEEIIAGLARTEGFDTVGITRADAIPQAGARLKDWVAGGAHGDMGWMAETLERRADPAVLWPAIRSVIMLGL
NYGPADDPRAVLAQRSAGAISVYARAEDYHDIIKPKLKRVARALLAEAQRRGLDGDVKVFVDTAPLMEKPLAAAAGLGWQ
GRHTNLVSRDFGSWLFLGAIATTVELKPSAPEQDHCGSCRACLDACPTAAFPAPYVIDARRCVSYLTIEHKGPIPRELRP
LMGNRIYGCDDCLAACPWNKFAELGREVKLAARAENDAPPLAELVALDDAAFRARFPKSPIKRVGRDRFVRNVLVAMGNS
GDAALLPQVEARLGDASALVRGAAVWALGQLADPDTVFRRAREALPQEDDAVVRAEWAAASVEQP

Sequences:

>Translated_385_residues
MTETAGTPLEEIIAGLARTEGFDTVGITRADAIPQAGARLKDWVAGGAHGDMGWMAETLERRADPAVLWPAIRSVIMLGL
NYGPADDPRAVLAQRSAGAISVYARAEDYHDIIKPKLKRVARALLAEAQRRGLDGDVKVFVDTAPLMEKPLAAAAGLGWQ
GRHTNLVSRDFGSWLFLGAIATTVELKPSAPEQDHCGSCRACLDACPTAAFPAPYVIDARRCVSYLTIEHKGPIPRELRP
LMGNRIYGCDDCLAACPWNKFAELGREVKLAARAENDAPPLAELVALDDAAFRARFPKSPIKRVGRDRFVRNVLVAMGNS
GDAALLPQVEARLGDASALVRGAAVWALGQLADPDTVFRRAREALPQEDDAVVRAEWAAASVEQP
>Mature_384_residues
TETAGTPLEEIIAGLARTEGFDTVGITRADAIPQAGARLKDWVAGGAHGDMGWMAETLERRADPAVLWPAIRSVIMLGLN
YGPADDPRAVLAQRSAGAISVYARAEDYHDIIKPKLKRVARALLAEAQRRGLDGDVKVFVDTAPLMEKPLAAAAGLGWQG
RHTNLVSRDFGSWLFLGAIATTVELKPSAPEQDHCGSCRACLDACPTAAFPAPYVIDARRCVSYLTIEHKGPIPRELRPL
MGNRIYGCDDCLAACPWNKFAELGREVKLAARAENDAPPLAELVALDDAAFRARFPKSPIKRVGRDRFVRNVLVAMGNSG
DAALLPQVEARLGDASALVRGAAVWALGQLADPDTVFRRAREALPQEDDAVVRAEWAAASVEQP

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=332, Percent_Identity=41.566265060241, Blast_Score=265, Evalue=4e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013542
- InterPro:   IPR009051 [H]

Pfam domain/function: PF08331 DUF1730 [H]

EC number: NA

Molecular weight: Translated: 41428; Mature: 41297

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETAGTPLEEIIAGLARTEGFDTVGITRADAIPQAGARLKDWVAGGAHGDMGWMAETLE
CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHH
RRADPAVLWPAIRSVIMLGLNYGPADDPRAVLAQRSAGAISVYARAEDYHDIIKPKLKRV
HCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH
ARALLAEAQRRGLDGDVKVFVDTAPLMEKPLAAAAGLGWQGRHTNLVSRDFGSWLFLGAI
HHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
ATTVELKPSAPEQDHCGSCRACLDACPTAAFPAPYVIDARRCVSYLTIEHKGPIPRELRP
HHHEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEECCCCCCHHHHH
LMGNRIYGCDDCLAACPWNKFAELGREVKLAARAENDAPPLAELVALDDAAFRARFPKSP
HHCCCCCCHHHHHHHCCCHHHHHCCHHEEEHHHCCCCCCCHHHHHHHHHHHHHHCCCCCH
IKRVGRDRFVRNVLVAMGNSGDAALLPQVEARLGDASALVRGAAVWALGQLADPDTVFRR
HHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHH
AREALPQEDDAVVRAEWAAASVEQP
HHHHCCCCCCCEEEEHHHHHCCCCC
>Mature Secondary Structure 
TETAGTPLEEIIAGLARTEGFDTVGITRADAIPQAGARLKDWVAGGAHGDMGWMAETLE
CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHH
RRADPAVLWPAIRSVIMLGLNYGPADDPRAVLAQRSAGAISVYARAEDYHDIIKPKLKRV
HCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH
ARALLAEAQRRGLDGDVKVFVDTAPLMEKPLAAAAGLGWQGRHTNLVSRDFGSWLFLGAI
HHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
ATTVELKPSAPEQDHCGSCRACLDACPTAAFPAPYVIDARRCVSYLTIEHKGPIPRELRP
HHHEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEECCCCCCHHHHH
LMGNRIYGCDDCLAACPWNKFAELGREVKLAARAENDAPPLAELVALDDAAFRARFPKSP
HHCCCCCCHHHHHHHCCCHHHHHCCHHEEEHHHCCCCCCCHHHHHHHHHHHHHHCCCCCH
IKRVGRDRFVRNVLVAMGNSGDAALLPQVEARLGDASALVRGAAVWALGQLADPDTVFRR
HHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHH
AREALPQEDDAVVRAEWAAASVEQP
HHHHCCCCCCCEEEEHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]