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The map label for this gene is xoxF [H]

Identifier: 154245725

GI number: 154245725

Start: 2007384

End: 2009189

Strand: Reverse

Name: xoxF [H]

Synonym: Xaut_1781

Alternate gene names: 154245725

Gene position: 2009189-2007384 (Counterclockwise)

Preceding gene: 154245726

Following gene: 154245724

Centisome position: 37.85

GC content: 63.9

Gene sequence:

>1806_bases
ATGAGACGTCTTTTGGTTCTGACCGCCGCGGCGGTGGTCACGGCATTTGCCGGCGCGCCAGCACGCGCCAATGATAGTGT
TCTGAAACTCACTCAAGATCCCAACCAGTGGGCGCTCCAGACCGGGGATTACGCCAACACGCGTTTTTCCAAGCTGAAGC
AGATCACTGCGGACAACGTTGGCAAGCTCCAGGTTGCCTGGTCCTTCTCCACCGGCGTGCTGCGCGGCCATGAAGGCTCG
CCGCTCGTGGTGGGCGACGTGATGTACGTGCACACGCCCTTCCCGAACATCGTCTATGCGCTCGATCTGAAGAACGAGGG
CAAGATCATCTGGAAGTACGAGCCCAAGCAGGATCCGAACGTGATCCCGGTGATGTGCTGCGATACGGTCAATCGCGGTC
TCGCCTATGCTGACGGCAAGGTGTTCCTGCATCAGGCCGACACCAAGGTGGTGGCCCTCGACGCCCAGAACGGCAAGGTG
CTGTGGTCGGCGGTGAACGGCGATCCCAAGAAGGGTGAGACCAATACCGCGACCGTGATCCCGGTGAAGGACAAGCTCCT
CGTCGGCATCTCCGGCGGCGAGTTCGGCGTGCGCTGCCACATGACGGCGTATGACCTGAACAGCGGCAAGCAGATCTGGC
GCGCCTATTCCATCGGTCCGGACAGCGACATCCTCGTCGATCCCGAGAAGACCACGGAACTGGGCAAGCCGGTCGGCAAG
GATTCTTCGCTGAAGACCTGGCAGGGCGACCAGTGGAAGACCGGTGGCGGCTGCACCTGGGGCTGGTATTCCTACGATCC
CCAGACCAACCTCGTCTATTACGGCTCCGGCAACCCCTCCACCTGGAACCCCAAGCAGCGTCCCGGCGACAACAAGTGGT
CCATGACCGTGTTCGCCCGCGATGCCGACACGGGCGTCGCCAAGTGGGTGTACCAGATGACCCCCCACGACGAGTGGGAC
TATGACGGCGTCAACGAGATGATCCTGGTCGATCAGAAGATCGACAACAAGGATCGCTCGCTCCTCGTCCATTTCGACCG
CAACGGCTTCGGCTACACGCTGGACCGCAAGACCGGCGAACTGCTGGTGGCCGAAAAGTACGACCCCGCCGTGAACTGGG
CCACCAAGGTGGACATGGACCGCAACAGCCCGACCTACGGTCGTCCGCTGGTTGTGGGCCGCTACTCCACCGAGAAGGGC
GGCGAGGACACCAACACCACCGGCATCTGCCCGGCGGCGCTTGGCACCAAGGACCAGCAGCCCGCGGCCTTCTCGCCTGA
CACCGGCCTGTTCTACGTGCCCACCAACCACGTGTGCATGGACTACGAGCCGTTCCGCGTGAGCTACACCCCGGGCCAGC
CCTTCGTGGGCGCCACGCTCTCCATGTTCCCGGCGCCGAACAGCCACGGTGGCATGGGCAACTTCATCGCGTGGGATGCC
CGCCAGGGCAAGATCGTGTGGTCCAACAAGGAGCAGTTCTCCGTGTGGTCCGGCGCGCTCGCCACCGCTGGCGGCGTGGT
CTTCTACGGCACCCTCGAAGGCTACCTGAAGGCGGTTGACGCCAAGACGGGCAAGGAACTCTACAAGTTCAAGACCCCGT
CCGGCATCATCGGCAACGTGATGACCTACACCCACCAGGGCAAGCAGTATGTGGCCGTGCTCTCGGGCGTCGGCGGCTGG
GCCGGCATCGGCCTCGCGGCCGGCCTCAACGACCCCAACGCCGGCCTCGGCGCTGTGGGTGGCTATGCGGCCCTGAGCAA
CTACACTGCTCTCGGCGGCCAGCTCACGGTGTTCGCCGTCCCCTGA

Upstream 100 bases:

>100_bases
CCGAAGTAGATGGAGTCCCCCAAGGCGAAAACAACGCGCTCAGTGCGTTACCCGATCCACGTGGGTGGAGGCGGGCGCGC
ATCCATCGGAGGAAGCCCGG

Downstream 100 bases:

>100_bases
CGGGACGGACGGCCTGAAGCGCGACTGACGCGTTCCGGATGACAGGATCTCCGGCGCGTCCCCAGAAGGACCGGCACGCC
CCTAGATACAGGCGGCGTGC

Product: Pyrrolo-quinoline quinone

Products: aldehyde; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 601; Mature: 601

Protein sequence:

>601_residues
MRRLLVLTAAAVVTAFAGAPARANDSVLKLTQDPNQWALQTGDYANTRFSKLKQITADNVGKLQVAWSFSTGVLRGHEGS
PLVVGDVMYVHTPFPNIVYALDLKNEGKIIWKYEPKQDPNVIPVMCCDTVNRGLAYADGKVFLHQADTKVVALDAQNGKV
LWSAVNGDPKKGETNTATVIPVKDKLLVGISGGEFGVRCHMTAYDLNSGKQIWRAYSIGPDSDILVDPEKTTELGKPVGK
DSSLKTWQGDQWKTGGGCTWGWYSYDPQTNLVYYGSGNPSTWNPKQRPGDNKWSMTVFARDADTGVAKWVYQMTPHDEWD
YDGVNEMILVDQKIDNKDRSLLVHFDRNGFGYTLDRKTGELLVAEKYDPAVNWATKVDMDRNSPTYGRPLVVGRYSTEKG
GEDTNTTGICPAALGTKDQQPAAFSPDTGLFYVPTNHVCMDYEPFRVSYTPGQPFVGATLSMFPAPNSHGGMGNFIAWDA
RQGKIVWSNKEQFSVWSGALATAGGVVFYGTLEGYLKAVDAKTGKELYKFKTPSGIIGNVMTYTHQGKQYVAVLSGVGGW
AGIGLAAGLNDPNAGLGAVGGYAALSNYTALGGQLTVFAVP

Sequences:

>Translated_601_residues
MRRLLVLTAAAVVTAFAGAPARANDSVLKLTQDPNQWALQTGDYANTRFSKLKQITADNVGKLQVAWSFSTGVLRGHEGS
PLVVGDVMYVHTPFPNIVYALDLKNEGKIIWKYEPKQDPNVIPVMCCDTVNRGLAYADGKVFLHQADTKVVALDAQNGKV
LWSAVNGDPKKGETNTATVIPVKDKLLVGISGGEFGVRCHMTAYDLNSGKQIWRAYSIGPDSDILVDPEKTTELGKPVGK
DSSLKTWQGDQWKTGGGCTWGWYSYDPQTNLVYYGSGNPSTWNPKQRPGDNKWSMTVFARDADTGVAKWVYQMTPHDEWD
YDGVNEMILVDQKIDNKDRSLLVHFDRNGFGYTLDRKTGELLVAEKYDPAVNWATKVDMDRNSPTYGRPLVVGRYSTEKG
GEDTNTTGICPAALGTKDQQPAAFSPDTGLFYVPTNHVCMDYEPFRVSYTPGQPFVGATLSMFPAPNSHGGMGNFIAWDA
RQGKIVWSNKEQFSVWSGALATAGGVVFYGTLEGYLKAVDAKTGKELYKFKTPSGIIGNVMTYTHQGKQYVAVLSGVGGW
AGIGLAAGLNDPNAGLGAVGGYAALSNYTALGGQLTVFAVP
>Mature_601_residues
MRRLLVLTAAAVVTAFAGAPARANDSVLKLTQDPNQWALQTGDYANTRFSKLKQITADNVGKLQVAWSFSTGVLRGHEGS
PLVVGDVMYVHTPFPNIVYALDLKNEGKIIWKYEPKQDPNVIPVMCCDTVNRGLAYADGKVFLHQADTKVVALDAQNGKV
LWSAVNGDPKKGETNTATVIPVKDKLLVGISGGEFGVRCHMTAYDLNSGKQIWRAYSIGPDSDILVDPEKTTELGKPVGK
DSSLKTWQGDQWKTGGGCTWGWYSYDPQTNLVYYGSGNPSTWNPKQRPGDNKWSMTVFARDADTGVAKWVYQMTPHDEWD
YDGVNEMILVDQKIDNKDRSLLVHFDRNGFGYTLDRKTGELLVAEKYDPAVNWATKVDMDRNSPTYGRPLVVGRYSTEKG
GEDTNTTGICPAALGTKDQQPAAFSPDTGLFYVPTNHVCMDYEPFRVSYTPGQPFVGATLSMFPAPNSHGGMGNFIAWDA
RQGKIVWSNKEQFSVWSGALATAGGVVFYGTLEGYLKAVDAKTGKELYKFKTPSGIIGNVMTYTHQGKQYVAVLSGVGGW
AGIGLAAGLNDPNAGLGAVGGYAALSNYTALGGQLTVFAVP

Specific function: Gdh Is Probably Involved In Energy Conservation Rather Than In Sugar Metabolism. [C]

COG id: COG4993

COG function: function code G; Glucose dehydrogenase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial PQQ dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1786316, Length=373, Percent_Identity=26.8096514745308, Blast_Score=114, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019556
- InterPro:   IPR019551
- InterPro:   IPR018391
- InterPro:   IPR017512
- InterPro:   IPR002372
- InterPro:   IPR011047
- InterPro:   IPR001479 [H]

Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]

EC number: 1.1.99.8

Molecular weight: Translated: 65247; Mature: 65247

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: PS00364 BACTERIAL_PQQ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLLVLTAAAVVTAFAGAPARANDSVLKLTQDPNQWALQTGDYANTRFSKLKQITADNV
CCEEEEEHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHHCCCC
GKLQVAWSFSTGVLRGHEGSPLVVGDVMYVHTPFPNIVYALDLKNEGKIIWKYEPKQDPN
CEEEEEEEECCCEEECCCCCCEEEEEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCC
VIPVMCCDTVNRGLAYADGKVFLHQADTKVVALDAQNGKVLWSAVNGDPKKGETNTATVI
EEEEEEECCCCCCEEEECCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCEEEE
PVKDKLLVGISGGEFGVRCHMTAYDLNSGKQIWRAYSIGPDSDILVDPEKTTELGKPVGK
EECCEEEEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCEEECCHHHHHHCCCCCC
DSSLKTWQGDQWKTGGGCTWGWYSYDPQTNLVYYGSGNPSTWNPKQRPGDNKWSMTVFAR
CCCCCCCCCCCEECCCCEEECCEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEE
DADTGVAKWVYQMTPHDEWDYDGVNEMILVDQKIDNKDRSLLVHFDRNGFGYTLDRKTGE
CCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEECCCCC
LLVAEKYDPAVNWATKVDMDRNSPTYGRPLVVGRYSTEKGGEDTNTTGICPAALGTKDQQ
EEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHCCCCCCC
PAAFSPDTGLFYVPTNHVCMDYEPFRVSYTPGQPFVGATLSMFPAPNSHGGMGNFIAWDA
CCCCCCCCCEEEECCCCEEECCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCEEEEEC
RQGKIVWSNKEQFSVWSGALATAGGVVFYGTLEGYLKAVDAKTGKELYKFKTPSGIIGNV
CCCEEEECCCCCEEEECCHHHHCCCEEEEEEHHHHHHHHCCCCCCHHEEECCCCCCCCCE
MTYTHQGKQYVAVLSGVGGWAGIGLAAGLNDPNAGLGAVGGYAALSNYTALGGQLTVFAV
EEEEECCCEEEEEEECCCCHHHCEEEECCCCCCCCCCCCCCHHHHCCCEECCCEEEEEEE
P
C
>Mature Secondary Structure
MRRLLVLTAAAVVTAFAGAPARANDSVLKLTQDPNQWALQTGDYANTRFSKLKQITADNV
CCEEEEEHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHHCCCC
GKLQVAWSFSTGVLRGHEGSPLVVGDVMYVHTPFPNIVYALDLKNEGKIIWKYEPKQDPN
CEEEEEEEECCCEEECCCCCCEEEEEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCC
VIPVMCCDTVNRGLAYADGKVFLHQADTKVVALDAQNGKVLWSAVNGDPKKGETNTATVI
EEEEEEECCCCCCEEEECCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCEEEE
PVKDKLLVGISGGEFGVRCHMTAYDLNSGKQIWRAYSIGPDSDILVDPEKTTELGKPVGK
EECCEEEEEECCCCEEEEEEEEEEECCCCCEEEEEEECCCCCCEEECCHHHHHHCCCCCC
DSSLKTWQGDQWKTGGGCTWGWYSYDPQTNLVYYGSGNPSTWNPKQRPGDNKWSMTVFAR
CCCCCCCCCCCEECCCCEEECCEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEE
DADTGVAKWVYQMTPHDEWDYDGVNEMILVDQKIDNKDRSLLVHFDRNGFGYTLDRKTGE
CCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEECCCCC
LLVAEKYDPAVNWATKVDMDRNSPTYGRPLVVGRYSTEKGGEDTNTTGICPAALGTKDQQ
EEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHCCCCCCC
PAAFSPDTGLFYVPTNHVCMDYEPFRVSYTPGQPFVGATLSMFPAPNSHGGMGNFIAWDA
CCCCCCCCCEEEECCCCEEECCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCEEEEEC
RQGKIVWSNKEQFSVWSGALATAGGVVFYGTLEGYLKAVDAKTGKELYKFKTPSGIIGNV
CCCEEEECCCCCEEEECCHHHHCCCEEEEEEHHHHHHHHCCCCCCHHEEECCCCCCCCCE
MTYTHQGKQYVAVLSGVGGWAGIGLAAGLNDPNAGLGAVGGYAALSNYTALGGQLTVFAV
EEEEECCCEEEEEEECCCCHHHCEEEECCCCCCCCCCCCCCHHHHCCCEECCCEEEEEEE
P
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: primary alcohol; acceptor

Specific reaction: a primary alcohol + acceptor = an aldehyde + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1657873 [H]