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The map label for this gene is cycB [H]

Identifier: 154245724

GI number: 154245724

Start: 2006454

End: 2007002

Strand: Reverse

Name: cycB [H]

Synonym: Xaut_1780

Alternate gene names: 154245724

Gene position: 2007002-2006454 (Counterclockwise)

Preceding gene: 154245725

Following gene: 154245723

Centisome position: 37.8

GC content: 61.02

Gene sequence:

>549_bases
GTGGTTTCAACAGTCAATCTGAAGCGCGCCGGCGTTTTCTTCTTCGCCGCGTTCAGCTTTCAAGTGGTCGGCGCCAGCCT
GCCCGCGTTCGCGGAATTCACCCCTCCGGGTGACCCGAAGCCGGTGAAGGAAGAGGACGGCAAATATTTCGATGCCTCCG
GCGCTCCCACCTACAACGTCAAGCCTGACGGCACGGTGGATTGGTTCACCTATTCCGGCTACCGGCGCTATCACGCCGAA
TGCCATGTCTGCCATGGCCCCGACGGCATGGGCTCCACCTATGCGCCGGCCCTTATCGATTCGGTCAAGGCCATGAACTT
CGACCAGTTCAGCGAAGTGGTGGTGGGCGGCCGGCAGAACATCAGCAGCGGCAACGACAAGGTCATGCCGTCCTTCGGCC
TGAACAAGAATGTGATGTGCTACCTGGACGACATCTACGTCTACTTGCGCGCCCGTTCGAACGATGCACTGGGCCGCGTG
CGTCCCGCGAAGCGGGATGACAAGACGCAGGGAACCACCGATGCGGAAAAAGCCTGCCTCGGCGAGTAG

Upstream 100 bases:

>100_bases
TCCTCGCGCGTGCTTTGGCGCCTTTGCATTGGAGAGCGAGGGACGGAACGCCGCTGCGGCGCCGGCTCTAGCCCTTCGTC
TGCCCTTTTGGAGAGATCGT

Downstream 100 bases:

>100_bases
CCGGGCCCCGGCGACCAAGGAGCGTTTCGCCGCGCTCCTCGCCTCCTTCGCCACCGGTGCGCTGGCCGCGATCCTGCTGC
TGAGCGCCTCGGGGGCGCGC

Product: putative cytochrome c protein

Products: NA

Alternate protein names: Cytochrome c553I [H]

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MVSTVNLKRAGVFFFAAFSFQVVGASLPAFAEFTPPGDPKPVKEEDGKYFDASGAPTYNVKPDGTVDWFTYSGYRRYHAE
CHVCHGPDGMGSTYAPALIDSVKAMNFDQFSEVVVGGRQNISSGNDKVMPSFGLNKNVMCYLDDIYVYLRARSNDALGRV
RPAKRDDKTQGTTDAEKACLGE

Sequences:

>Translated_182_residues
MVSTVNLKRAGVFFFAAFSFQVVGASLPAFAEFTPPGDPKPVKEEDGKYFDASGAPTYNVKPDGTVDWFTYSGYRRYHAE
CHVCHGPDGMGSTYAPALIDSVKAMNFDQFSEVVVGGRQNISSGNDKVMPSFGLNKNVMCYLDDIYVYLRARSNDALGRV
RPAKRDDKTQGTTDAEKACLGE
>Mature_182_residues
MVSTVNLKRAGVFFFAAFSFQVVGASLPAFAEFTPPGDPKPVKEEDGKYFDASGAPTYNVKPDGTVDWFTYSGYRRYHAE
CHVCHGPDGMGSTYAPALIDSVKAMNFDQFSEVVVGGRQNISSGNDKVMPSFGLNKNVMCYLDDIYVYLRARSNDALGRV
RPAKRDDKTQGTTDAEKACLGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022411
- InterPro:   IPR009056 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19921; Mature: 19921

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSTVNLKRAGVFFFAAFSFQVVGASLPAFAEFTPPGDPKPVKEEDGKYFDASGAPTYNV
CCCCCCCCCCCEEEEEEEHHEEECCCCCCCEECCCCCCCCCCCCCCCCEEECCCCCEECC
KPDGTVDWFTYSGYRRYHAECHVCHGPDGMGSTYAPALIDSVKAMNFDQFSEVVVGGRQN
CCCCCEEEEEECCEEEEECEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCC
ISSGNDKVMPSFGLNKNVMCYLDDIYVYLRARSNDALGRVRPAKRDDKTQGTTDAEKACL
CCCCCCEECCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHC
GE
CC
>Mature Secondary Structure
MVSTVNLKRAGVFFFAAFSFQVVGASLPAFAEFTPPGDPKPVKEEDGKYFDASGAPTYNV
CCCCCCCCCCCEEEEEEEHHEEECCCCCCCEECCCCCCCCCCCCCCCCEEECCCCCEECC
KPDGTVDWFTYSGYRRYHAECHVCHGPDGMGSTYAPALIDSVKAMNFDQFSEVVVGGRQN
CCCCCEEEEEECCEEEEECEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCC
ISSGNDKVMPSFGLNKNVMCYLDDIYVYLRARSNDALGRVRPAKRDDKTQGTTDAEKACL
CCCCCCEECCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHC
GE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1657873 [H]