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The map label for this gene is ydjA [H]

Identifier: 154245580

GI number: 154245580

Start: 1853857

End: 1854420

Strand: Reverse

Name: ydjA [H]

Synonym: Xaut_1635

Alternate gene names: 154245580

Gene position: 1854420-1853857 (Counterclockwise)

Preceding gene: 154245583

Following gene: 154245578

Centisome position: 34.93

GC content: 71.81

Gene sequence:

>564_bases
ATGCCCGACGCCCTCGAACTCCTCGCCACCCGTCGCTCCTCCCGCGTCATCGACCTGATCGAGCCCGGCCCGTCGGCGCA
GGAGCTGGACACCCTCCTCACCATCGCCTCCCGCGTGCCGGACCATGGCAAGCTCGCGCCGTGGCGCTTCATCGTGTTCG
AGGGCGAAGGCCGCGCCCGCGCCGGAGCAAAGCTCGCCGAGGTGCTGGCGGCAGCCGATCCCGGCGTGTCGGAAAAGCGG
CTGGAGGACGAGCGCGGTCGCTTCCTGCGCGCGCCGGTGGTGGTGGCGGTCGTCTCGCGCGCCGCGCCCCACGTGAAGAT
CCCGGAGTTCGAGCAGCTCCTGTCCTCGGCCGCCGCCTGCCAGAACCTGCTGATCGCCGCCGCCGCCCTCGGCTATGGCG
CCACCTGGCTCTCCGAATGGCCGACCTACGATGCGGAAGCCCGCACCGCGCTGGGCCTGGACAGCTTCGAGCGCATCACC
GGCTTCATCTATATCGGCACCGCCACCCAGAAGCTGGAGGACCGCCCCCGCCCCGACCTCGCCGCCGTGGTGACGCGGTT
CTGA

Upstream 100 bases:

>100_bases
CCTCGCTGGCCCGCGCCCTGTTCAAACCGGCGGCACTTGCCCTTATGGTGCTGCTCTACCCGCCTTGCGCCTTTCCATTC
TTCAGCAGAGCCATTGCCCC

Downstream 100 bases:

>100_bases
CGGCTCATTCGTCCGACAGCGGGTGCAGGTCGCGCACCATGCTCTTCAGGCGCTCGTCCAGGACGTGGGTGTAGATCTGG
GTGGTGGAGACATCGGCATG

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MPDALELLATRRSSRVIDLIEPGPSAQELDTLLTIASRVPDHGKLAPWRFIVFEGEGRARAGAKLAEVLAAADPGVSEKR
LEDERGRFLRAPVVVAVVSRAAPHVKIPEFEQLLSSAAACQNLLIAAAALGYGATWLSEWPTYDAEARTALGLDSFERIT
GFIYIGTATQKLEDRPRPDLAAVVTRF

Sequences:

>Translated_187_residues
MPDALELLATRRSSRVIDLIEPGPSAQELDTLLTIASRVPDHGKLAPWRFIVFEGEGRARAGAKLAEVLAAADPGVSEKR
LEDERGRFLRAPVVVAVVSRAAPHVKIPEFEQLLSSAAACQNLLIAAAALGYGATWLSEWPTYDAEARTALGLDSFERIT
GFIYIGTATQKLEDRPRPDLAAVVTRF
>Mature_186_residues
PDALELLATRRSSRVIDLIEPGPSAQELDTLLTIASRVPDHGKLAPWRFIVFEGEGRARAGAKLAEVLAAADPGVSEKRL
EDERGRFLRAPVVVAVVSRAAPHVKIPEFEQLLSSAAACQNLLIAAAALGYGATWLSEWPTYDAEARTALGLDSFERITG
FIYIGTATQKLEDRPRPDLAAVVTRF

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=186, Percent_Identity=37.6344086021505, Blast_Score=117, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 20276; Mature: 20145

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDALELLATRRSSRVIDLIEPGPSAQELDTLLTIASRVPDHGKLAPWRFIVFEGEGRAR
CCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCH
AGAKLAEVLAAADPGVSEKRLEDERGRFLRAPVVVAVVSRAAPHVKIPEFEQLLSSAAAC
HHHHHHHHHHHCCCCCCHHHHHHHHCCEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
QNLLIAAAALGYGATWLSEWPTYDAEARTALGLDSFERITGFIYIGTATQKLEDRPRPDL
HHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHCCHHHHHHEEEEEECCCHHHHHCCCCCCH
AAVVTRF
HHHHHCC
>Mature Secondary Structure 
PDALELLATRRSSRVIDLIEPGPSAQELDTLLTIASRVPDHGKLAPWRFIVFEGEGRAR
CHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCH
AGAKLAEVLAAADPGVSEKRLEDERGRFLRAPVVVAVVSRAAPHVKIPEFEQLLSSAAAC
HHHHHHHHHHHCCCCCCHHHHHHHHCCEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
QNLLIAAAALGYGATWLSEWPTYDAEARTALGLDSFERITGFIYIGTATQKLEDRPRPDL
HHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHCCHHHHHHEEEEEECCCHHHHHCCCCCCH
AAVVTRF
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]