| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is aroE [H]
Identifier: 154245561
GI number: 154245561
Start: 1829712
End: 1830545
Strand: Reverse
Name: aroE [H]
Synonym: Xaut_1616
Alternate gene names: 154245561
Gene position: 1830545-1829712 (Counterclockwise)
Preceding gene: 154245562
Following gene: 154245560
Centisome position: 34.48
GC content: 69.9
Gene sequence:
>834_bases ATGACCACACCCCAGCCCACCCGCGAGATCACCGGCCACACCCGCGTCTACGGCATCCTCGCCGACCCCATCCATCACGT GAAGACGCCGCAGATGCTCAACGCGCTGATGGCGCGCGAGGGCCGCGACGGGGTGATGGTGCCGTTCCAGGTCGCCCCGG ACGACCTCGCGACGCTGGTCGCGGGCCTCAAGACCATGAAGAGCCTCGGCGGCTTCGTGGTGACGGTGCCGCACAAGACC GCCATCGTGGACCTGTGCGACGCCGTCTCCGACAGCGCCCGCCGCATCGGGGCGGTGAACACGGTGCGCCGCGAGGCGGA CGGCCGGCTCATCGGCGAGATGCTGGACGGCAAGGGCTTCGTCGGCGGCCTGCTGGCGGCGGGCATCGATCCGAAGGACA AAAGCGTCTACCTCGCCGGCGCCGGCGGGGCGGCCAACGCCATTGCCTTTGCCTTCGTGGAAGCTGGCATCTCCCGCCTC ACCATCGCCAACCGCACCCGCGCCAAGGCGGAAGACCTCGCCGTCCGCCTCGCCGAGGCCTATCCCAAGGCGCAGGTGGA CATCGGCAACCCTGACCCCTCCGGCCACGACATCGTGGTGAATGGCACCTCCCTCGGCCTCAAGGACGGCGATGCCCTGC CGCTCGATACCGCACGCCTGTCGCCGGAGCAGATCGTGGCCGAGGTGATCATGCAACCGGAGGAGACCGCCCTCCTCGCC GCCGCCAAGGCGAAGGGCTGCCGCATCCATTTCGGCAAGCCCATGCTGGCCTGCCAGCTCGACCTCATGGCCGAGTTCCT CGGCATGCGCGCGCTCCCGGGAGCCGGCAAGTGA
Upstream 100 bases:
>100_bases TTGCCCTCGAGAACACCGGCATCGGCCTGCTCGCCGACCCGCACATCAAGACCGCCTACCTCGGCATCTGAGCCTTCGGG CCACCCCCGGAACCTGCCCC
Downstream 100 bases:
>100_bases GCGGCCCCGGCACTGGCGCCCTCGCCGGCCGCTGCGCCCTCATCACCGGCGGCGCCTCCGGACTTGGCCTTGCCGTGGCG CAAGCGTTCCGGGTCGAGGG
Product: shikimate dehydrogenase substrate binding subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MTTPQPTREITGHTRVYGILADPIHHVKTPQMLNALMAREGRDGVMVPFQVAPDDLATLVAGLKTMKSLGGFVVTVPHKT AIVDLCDAVSDSARRIGAVNTVRREADGRLIGEMLDGKGFVGGLLAAGIDPKDKSVYLAGAGGAANAIAFAFVEAGISRL TIANRTRAKAEDLAVRLAEAYPKAQVDIGNPDPSGHDIVVNGTSLGLKDGDALPLDTARLSPEQIVAEVIMQPEETALLA AAKAKGCRIHFGKPMLACQLDLMAEFLGMRALPGAGK
Sequences:
>Translated_277_residues MTTPQPTREITGHTRVYGILADPIHHVKTPQMLNALMAREGRDGVMVPFQVAPDDLATLVAGLKTMKSLGGFVVTVPHKT AIVDLCDAVSDSARRIGAVNTVRREADGRLIGEMLDGKGFVGGLLAAGIDPKDKSVYLAGAGGAANAIAFAFVEAGISRL TIANRTRAKAEDLAVRLAEAYPKAQVDIGNPDPSGHDIVVNGTSLGLKDGDALPLDTARLSPEQIVAEVIMQPEETALLA AAKAKGCRIHFGKPMLACQLDLMAEFLGMRALPGAGK >Mature_276_residues TTPQPTREITGHTRVYGILADPIHHVKTPQMLNALMAREGRDGVMVPFQVAPDDLATLVAGLKTMKSLGGFVVTVPHKTA IVDLCDAVSDSARRIGAVNTVRREADGRLIGEMLDGKGFVGGLLAAGIDPKDKSVYLAGAGGAANAIAFAFVEAGISRLT IANRTRAKAEDLAVRLAEAYPKAQVDIGNPDPSGHDIVVNGTSLGLKDGDALPLDTARLSPEQIVAEVIMQPEETALLAA AKAKGCRIHFGKPMLACQLDLMAEFLGMRALPGAGK
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; fourth step. [C]
COG id: COG0169
COG function: function code E; Shikimate 5-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1787983, Length=264, Percent_Identity=29.5454545454545, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1789675, Length=239, Percent_Identity=28.0334728033473, Blast_Score=78, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR011342 - InterPro: IPR013708 - InterPro: IPR022893 - InterPro: IPR006151 [H]
Pfam domain/function: PF01488 Shikimate_DH; PF08501 Shikimate_dh_N [H]
EC number: =1.1.1.25 [H]
Molecular weight: Translated: 29006; Mature: 28875
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPQPTREITGHTRVYGILADPIHHVKTPQMLNALMAREGRDGVMVPFQVAPDDLATLV CCCCCCCHHHCCCEEEEEEECCCHHHCCCHHHHHHHHHCCCCCCCEEEEEECCHHHHHHH AGLKTMKSLGGFVVTVPHKTAIVDLCDAVSDSARRIGAVNTVRREADGRLIGEMLDGKGF HHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCH VGGLLAAGIDPKDKSVYLAGAGGAANAIAFAFVEAGISRLTIANRTRAKAEDLAVRLAEA HHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCHHHEEECCCHHHHHHHHHHHHHHH YPKAQVDIGNPDPSGHDIVVNGTSLGLKDGDALPLDTARLSPEQIVAEVIMQPEETALLA CCCCEEECCCCCCCCCEEEEECCEECCCCCCCCCCCHHCCCHHHHHHHHHCCCCHHHHHH AAKAKGCRIHFGKPMLACQLDLMAEFLGMRALPGAGK HHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TTPQPTREITGHTRVYGILADPIHHVKTPQMLNALMAREGRDGVMVPFQVAPDDLATLV CCCCCCHHHCCCEEEEEEECCCHHHCCCHHHHHHHHHCCCCCCCEEEEEECCHHHHHHH AGLKTMKSLGGFVVTVPHKTAIVDLCDAVSDSARRIGAVNTVRREADGRLIGEMLDGKGF HHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCH VGGLLAAGIDPKDKSVYLAGAGGAANAIAFAFVEAGISRLTIANRTRAKAEDLAVRLAEA HHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCHHHEEECCCHHHHHHHHHHHHHHH YPKAQVDIGNPDPSGHDIVVNGTSLGLKDGDALPLDTARLSPEQIVAEVIMQPEETALLA CCCCEEECCCCCCCCCEEEEECCEECCCCCCCCCCCHHCCCHHHHHHHHHCCCCHHHHHH AAKAKGCRIHFGKPMLACQLDLMAEFLGMRALPGAGK HHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]