| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is entA [H]
Identifier: 154245538
GI number: 154245538
Start: 1803255
End: 1803965
Strand: Direct
Name: entA [H]
Synonym: Xaut_1592
Alternate gene names: 154245538
Gene position: 1803255-1803965 (Clockwise)
Preceding gene: 154245536
Following gene: 154245542
Centisome position: 33.97
GC content: 72.57
Gene sequence:
>711_bases ATGGCACTCGACCTGACAGGCAAGCGCGTTCTGATCGTTGGTGCGGGCGGCGGCATCGGCGCGGCCACCGCGCGGGCCTT TGCTGATGCCGGCGCCCACGTGTTCGCCGCCGGCCGGCCGGGGCCGAAGCTGGACGCCGTCGCGACCGGGACCGGCGGCG TGGCGGTGGCCCTCGACATTCTCGACGATGGTGCCATCGAACGCGTCTTCGCGGAGGCGCCGGCCTTCGACCACGTCGCC ATCGCGGCCGCTGCGACCAAGAGTGGCCCGGTCTCCGGCCTGCCTCTGGAGGCCGCGAAGGCCTCCATGGAGAGCAAGTT CTGGGGCGCCTACCGCGTCGCCCGCGCGGCGCAGGTGGCGGATGGAGGCTCCATCACCTTCGTATCCGGCTTCCTCTCCC ACCGGCCGAGCGCGGGCGCGGTGCTGCAGGGCGCGATCAACGCCGCGATCGAGGCGCTCGCCCGCGGCCTGGCGCTCGAG CGGGCGCCAGTGCGCGTCAATACCGTCTCGCCCGGACTTATCGACACGCCGCTGTGGCAGGGCATGCGGGAGGATGACCG CGCGGCCATGTTCGCTCGCACCGCCGAGCGTCTGCCCGCCCGCCGTGTGGGGCGGCCGGAGGACATCGCACAGGCGATCC TCTTCGTCGCCACCAACCCGTTCGTCACCGGCACGACCGTCACGGTCGATGGTGGCGGCACCATTGCGTGA
Upstream 100 bases:
>100_bases GCTCGCTTATCAGCTTCAGAACAAGAGCGCACATTGCCCTCATGGCGAATTGGACTTTCCCGGCTGCGGCAGGCCGGAGA CGAGGACAGGAGGTCTCATC
Downstream 100 bases:
>100_bases GGTCGGCATGCCGGACTCGGTACGCCATGCGGTGTCACTGGCCGCCGTCTGATGCCGGCGGTTTCGTCCTCTCCGTGGCG CCGCCCGCGCGGGCGGGTCC
Product: short chain dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MALDLTGKRVLIVGAGGGIGAATARAFADAGAHVFAAGRPGPKLDAVATGTGGVAVALDILDDGAIERVFAEAPAFDHVA IAAAATKSGPVSGLPLEAAKASMESKFWGAYRVARAAQVADGGSITFVSGFLSHRPSAGAVLQGAINAAIEALARGLALE RAPVRVNTVSPGLIDTPLWQGMREDDRAAMFARTAERLPARRVGRPEDIAQAILFVATNPFVTGTTVTVDGGGTIA
Sequences:
>Translated_236_residues MALDLTGKRVLIVGAGGGIGAATARAFADAGAHVFAAGRPGPKLDAVATGTGGVAVALDILDDGAIERVFAEAPAFDHVA IAAAATKSGPVSGLPLEAAKASMESKFWGAYRVARAAQVADGGSITFVSGFLSHRPSAGAVLQGAINAAIEALARGLALE RAPVRVNTVSPGLIDTPLWQGMREDDRAAMFARTAERLPARRVGRPEDIAQAILFVATNPFVTGTTVTVDGGGTIA >Mature_235_residues ALDLTGKRVLIVGAGGGIGAATARAFADAGAHVFAAGRPGPKLDAVATGTGGVAVALDILDDGAIERVFAEAPAFDHVAI AAAATKSGPVSGLPLEAAKASMESKFWGAYRVARAAQVADGGSITFVSGFLSHRPSAGAVLQGAINAAIEALARGLALER APVRVNTVSPGLIDTPLWQGMREDDRAAMFARTAERLPARRVGRPEDIAQAILFVATNPFVTGTTVTVDGGGTIA
Specific function: Siderophore biosynthesis; enterobactin biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI7705925, Length=242, Percent_Identity=30.5785123966942, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI32483357, Length=252, Percent_Identity=31.3492063492063, Blast_Score=74, Evalue=8e-14, Organism=Homo sapiens, GI40254992, Length=233, Percent_Identity=24.8927038626609, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI10190704, Length=248, Percent_Identity=28.6290322580645, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI126723750, Length=255, Percent_Identity=29.8039215686275, Blast_Score=69, Evalue=5e-12, Organism=Escherichia coli, GI1786812, Length=248, Percent_Identity=31.4516129032258, Blast_Score=87, Evalue=8e-19, Organism=Escherichia coli, GI1787335, Length=244, Percent_Identity=27.4590163934426, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=31.9672131147541, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI87082100, Length=255, Percent_Identity=27.4509803921569, Blast_Score=67, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17562910, Length=262, Percent_Identity=28.6259541984733, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71994600, Length=245, Percent_Identity=31.0204081632653, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17555706, Length=245, Percent_Identity=29.7959183673469, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17562904, Length=262, Percent_Identity=27.0992366412214, Blast_Score=67, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17563726, Length=261, Percent_Identity=27.2030651340996, Blast_Score=67, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6324126, Length=250, Percent_Identity=26.4, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI23397609, Length=244, Percent_Identity=29.0983606557377, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI24644339, Length=255, Percent_Identity=30.1960784313725, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24643142, Length=244, Percent_Identity=27.8688524590164, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24639444, Length=248, Percent_Identity=27.0161290322581, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI28571526, Length=244, Percent_Identity=27.8688524590164, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI21357041, Length=246, Percent_Identity=29.2682926829268, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI24644337, Length=253, Percent_Identity=31.2252964426877, Blast_Score=68, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR003560 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.28 [H]
Molecular weight: Translated: 23808; Mature: 23677
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDLTGKRVLIVGAGGGIGAATARAFADAGAHVFAAGRPGPKLDAVATGTGGVAVALDI CCEECCCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCEEEEEEE LDDGAIERVFAEAPAFDHVAIAAAATKSGPVSGLPLEAAKASMESKFWGAYRVARAAQVA CCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC DGGSITFVSGFLSHRPSAGAVLQGAINAAIEALARGLALERAPVRVNTVSPGLIDTPLWQ CCCCEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHC GMREDDRAAMFARTAERLPARRVGRPEDIAQAILFVATNPFVTGTTVTVDGGGTIA CCCCCHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCEEECEEEEECCCCCCC >Mature Secondary Structure ALDLTGKRVLIVGAGGGIGAATARAFADAGAHVFAAGRPGPKLDAVATGTGGVAVALDI CEECCCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCEEEEEEE LDDGAIERVFAEAPAFDHVAIAAAATKSGPVSGLPLEAAKASMESKFWGAYRVARAAQVA CCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC DGGSITFVSGFLSHRPSAGAVLQGAINAAIEALARGLALERAPVRVNTVSPGLIDTPLWQ CCCCEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHC GMREDDRAAMFARTAERLPARRVGRPEDIAQAILFVATNPFVTGTTVTVDGGGTIA CCCCCHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCEEECEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2521622; 2521621; 9278503 [H]