Click here to switch to the map view.

The map label for this gene is 154245514

Identifier: 154245514

GI number: 154245514

Start: 1778733

End: 1779527

Strand: Direct

Name: 154245514

Synonym: Xaut_1568

Alternate gene names: NA

Gene position: 1778733-1779527 (Clockwise)

Preceding gene: 154245513

Following gene: 154245516

Centisome position: 33.5

GC content: 63.77

Gene sequence:

>795_bases
ATGGATATGGAAGAAAAGCTCGCCAAGATCGGCATCACCGGAAAGCTGTTCAAGCTGTACCTCGCCGCCGTGGAACTGGG
CGAGGCGCCGGTGCAGGAGGTAGCCGCCCGTGCCGGGCTTGCCCGCACCACCGCCTATGATGTGCTGGAGCGGCTGGAGC
ACGAAGAGCTGATCCGCATCGTGGAGCGCTCCGGCCGGCGCTTCGTGGTGGCCGAGGATCCGGTGGGCATGCTCCAGCGG
CTGGAACTGCGCAAGCAGGTGATCACCGATGTGATGCCGCAGATCCGCTCCCTCTACAATCGCGCCAAGGGCAAGCCCCA
GATCCGCTTCTACGAGGGCGAGGAGGGCATCAACACCGTGCTGTGGGATACCCTGACCTGCCAGAGCAAGACCCTGTGCG
GCATCCTCTCCATGAACGAGCTGATCGAGACGCCGGGGCTCGGGGAGATGGATGTGTATATTTCCGAGCGGGTGAAACGC
GGCATCACCCTGAAGGTGCTGCGCTCCCGCGACAAGGACGTGGGACAGATCTGGCCCTCGGGCTTGGAGCAATTGCGCGA
GCTGCGCTATGCACCCGATGGCATGACGCTGGGCGTGACCCAGTATGTCTATGACGACAAGGTCTCCATCATCTCTTCCA
AGCGCGAGAATTACGGCCTCATCATCGAGAGCGAGGATTTCGCGCGCCTGCAGTCTGTGATGTTCGAGACCTTGTGGTCC
ATCTCCACCCCAGCGGCGCCGGCCGAGCCGCCGCGCAAGCCCGCCGGCGGACGTCGCCGCGCGGAGAAGGTCTAG

Upstream 100 bases:

>100_bases
AAAGCTTGAAGACCTCACACGGCGGGGCATGCAATCCGCCGTGAATTCCGCCATTCTCACGGCGCGGCTCACCTGCGCCG
CGCCGTGAGACCAACACGTC

Downstream 100 bases:

>100_bases
GCAGGCCTATCTGCCGGCCGGCACGAGGCCGGTGAGGTCGTTCGCCTGAAGCTGAAGCCGGGTGCGGCGGATGTGGCTTT
CAAGCAAATGCTGCACGTCC

Product: transcriptional regulator, TrmB

Products: NA

Alternate protein names: Sugar-Specific Transcriptional Regulator TrmB Family

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MDMEEKLAKIGITGKLFKLYLAAVELGEAPVQEVAARAGLARTTAYDVLERLEHEELIRIVERSGRRFVVAEDPVGMLQR
LELRKQVITDVMPQIRSLYNRAKGKPQIRFYEGEEGINTVLWDTLTCQSKTLCGILSMNELIETPGLGEMDVYISERVKR
GITLKVLRSRDKDVGQIWPSGLEQLRELRYAPDGMTLGVTQYVYDDKVSIISSKRENYGLIIESEDFARLQSVMFETLWS
ISTPAAPAEPPRKPAGGRRRAEKV

Sequences:

>Translated_264_residues
MDMEEKLAKIGITGKLFKLYLAAVELGEAPVQEVAARAGLARTTAYDVLERLEHEELIRIVERSGRRFVVAEDPVGMLQR
LELRKQVITDVMPQIRSLYNRAKGKPQIRFYEGEEGINTVLWDTLTCQSKTLCGILSMNELIETPGLGEMDVYISERVKR
GITLKVLRSRDKDVGQIWPSGLEQLRELRYAPDGMTLGVTQYVYDDKVSIISSKRENYGLIIESEDFARLQSVMFETLWS
ISTPAAPAEPPRKPAGGRRRAEKV
>Mature_264_residues
MDMEEKLAKIGITGKLFKLYLAAVELGEAPVQEVAARAGLARTTAYDVLERLEHEELIRIVERSGRRFVVAEDPVGMLQR
LELRKQVITDVMPQIRSLYNRAKGKPQIRFYEGEEGINTVLWDTLTCQSKTLCGILSMNELIETPGLGEMDVYISERVKR
GITLKVLRSRDKDVGQIWPSGLEQLRELRYAPDGMTLGVTQYVYDDKVSIISSKRENYGLIIESEDFARLQSVMFETLWS
ISTPAAPAEPPRKPAGGRRRAEKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29859; Mature: 29859

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMEEKLAKIGITGKLFKLYLAAVELGEAPVQEVAARAGLARTTAYDVLERLEHEELIRI
CCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHH
VERSGRRFVVAEDPVGMLQRLELRKQVITDVMPQIRSLYNRAKGKPQIRFYEGEEGINTV
HHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH
LWDTLTCQSKTLCGILSMNELIETPGLGEMDVYISERVKRGITLKVLRSRDKDVGQIWPS
HHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEHHHCCCCHHHHHCHH
GLEQLRELRYAPDGMTLGVTQYVYDDKVSIISSKRENYGLIIESEDFARLQSVMFETLWS
HHHHHHHHHCCCCCCEECHHHHHHHCHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHH
ISTPAAPAEPPRKPAGGRRRAEKV
CCCCCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MDMEEKLAKIGITGKLFKLYLAAVELGEAPVQEVAARAGLARTTAYDVLERLEHEELIRI
CCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHCHHHHHHH
VERSGRRFVVAEDPVGMLQRLELRKQVITDVMPQIRSLYNRAKGKPQIRFYEGEEGINTV
HHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH
LWDTLTCQSKTLCGILSMNELIETPGLGEMDVYISERVKRGITLKVLRSRDKDVGQIWPS
HHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEHHHCCCCHHHHHCHH
GLEQLRELRYAPDGMTLGVTQYVYDDKVSIISSKRENYGLIIESEDFARLQSVMFETLWS
HHHHHHHHHCCCCCCEECHHHHHHHCHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHH
ISTPAAPAEPPRKPAGGRRRAEKV
CCCCCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA