| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is livK [C]
Identifier: 154245508
GI number: 154245508
Start: 1773092
End: 1774312
Strand: Direct
Name: livK [C]
Synonym: Xaut_1562
Alternate gene names: 154245508
Gene position: 1773092-1774312 (Clockwise)
Preceding gene: 154245505
Following gene: 154245509
Centisome position: 33.4
GC content: 66.75
Gene sequence:
>1221_bases ATGATGTCCGCACCTCTCGACCGGCGCCGCGCGGCGGGTGTCATGCTCGCTGCCGGTGCCGCCGTGTTCGCGTCCCTCCT CCAGCCAGCGCATGCGGCGGATGATGTGGTGGTGGGCGTGATCCAACCGCTCTCGGGGCCAAACGCCCAGTTCGGCATCG GCGCCCAGCGCGGCACCGAGCTCGCGGCCGAGATGATCAACGCCGCCGGCGGCATCAAGTCCCTGGGCGGGGCCAAGATC AAGCTGGTGGCCGCCGACGTGCCGACCCCCAACACCGCCGCCGCGACCACCCAGCGCCTGATCTCCCAGAACGGCGTGAG CGCGGTGGTTGGCGCTTTCGTTTCTTCCACCACCCTGGCGGCGTCGGAAGTGACCGAACGTGCCGGCATCCCGCTGGTCA CCTTCGCCTTCGCCGATCAGATCACCGGGCGCGGCTACCAGTACGTGTTCCAGGTGTCGCCGAAAGGCACGGTGTTCGGT GCCGCGCAGTTCGACTACGCCACCGAAATCGCCAAGGCCGCCGGCGAGAAGATCGACAAGATTGCTATCCTCTATGAGGA CACGGCCTATGGCACCGCCCAGGCCAAGGGCCTGCGCGATGCCGCGAAAAAGGCCGGTGTCGAGATCGTGCTGGACGAGG CCTATCCGCTCGGCATCACTGATGTGTCGCCGCTGGTGAACAAGCTGAGGGCTTCGGGCGCCCAGATGGCGTTCCCGGTA TCGTATCTCAACGACAGCCTGCTCATCATCCGCGCCCTGCGCCAGCAGCAGATCGATATCCCGGTGATTGGCGGCGCCGC CGGCTACATCATTCCCGACTTCAAGAAGGGCCTCGGCGACTACGCCGAGGGCGTGCTCTCGGTGGCGGCCGCCAGCGGCG ACCTGATCCCCGATCTCGCCGCCAAGTACAAGGAGAAGTACGGCGCGTTCATCACCCACGAAGCCCTGATCCACGCAGCT GCCCTGGATGCGGTGGCTCAGGCCATGGAGAAGGCCAAGTCGTCCGATCCACAGAAGGTGCGCGACGCCCTCGCCAGCCT TGATTATTGCGCCGGCTTCGCACGCGGCGTCCCCGGTGGCTGCATCAAGTTCGATGCCAACGGCCTCAACGCGTCCGCCT TCCCGGTGATGGTGCAATGGCGCGGCGACGAGCCGGTCACCGTCTATCCGCCCAAGGCGGCAAAGCAGGCTCCCATCTGG CGCGGCAAGCCGGTGAACTGA
Upstream 100 bases:
>100_bases GTGCGGTTCTTGCTCAAAATTTGACACAGAACGTTGTTGACGGAAAATGCCGACAAGACGTAGCGTCTGGCCATCGAAAG CCCGAGCCGAAGGTGGTCCC
Downstream 100 bases:
>100_bases AGCAATTCCTTTGGCCCCGCCATGTGGCGGGGCCGCCCTCCAGCCTGACGGGACGCATATGCTTCAGGCCCTTGTCGATG GTCTCCTCCTGGGTGGCGTC
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MMSAPLDRRRAAGVMLAAGAAVFASLLQPAHAADDVVVGVIQPLSGPNAQFGIGAQRGTELAAEMINAAGGIKSLGGAKI KLVAADVPTPNTAAATTQRLISQNGVSAVVGAFVSSTTLAASEVTERAGIPLVTFAFADQITGRGYQYVFQVSPKGTVFG AAQFDYATEIAKAAGEKIDKIAILYEDTAYGTAQAKGLRDAAKKAGVEIVLDEAYPLGITDVSPLVNKLRASGAQMAFPV SYLNDSLLIIRALRQQQIDIPVIGGAAGYIIPDFKKGLGDYAEGVLSVAAASGDLIPDLAAKYKEKYGAFITHEALIHAA ALDAVAQAMEKAKSSDPQKVRDALASLDYCAGFARGVPGGCIKFDANGLNASAFPVMVQWRGDEPVTVYPPKAAKQAPIW RGKPVN
Sequences:
>Translated_406_residues MMSAPLDRRRAAGVMLAAGAAVFASLLQPAHAADDVVVGVIQPLSGPNAQFGIGAQRGTELAAEMINAAGGIKSLGGAKI KLVAADVPTPNTAAATTQRLISQNGVSAVVGAFVSSTTLAASEVTERAGIPLVTFAFADQITGRGYQYVFQVSPKGTVFG AAQFDYATEIAKAAGEKIDKIAILYEDTAYGTAQAKGLRDAAKKAGVEIVLDEAYPLGITDVSPLVNKLRASGAQMAFPV SYLNDSLLIIRALRQQQIDIPVIGGAAGYIIPDFKKGLGDYAEGVLSVAAASGDLIPDLAAKYKEKYGAFITHEALIHAA ALDAVAQAMEKAKSSDPQKVRDALASLDYCAGFARGVPGGCIKFDANGLNASAFPVMVQWRGDEPVTVYPPKAAKQAPIW RGKPVN >Mature_406_residues MMSAPLDRRRAAGVMLAAGAAVFASLLQPAHAADDVVVGVIQPLSGPNAQFGIGAQRGTELAAEMINAAGGIKSLGGAKI KLVAADVPTPNTAAATTQRLISQNGVSAVVGAFVSSTTLAASEVTERAGIPLVTFAFADQITGRGYQYVFQVSPKGTVFG AAQFDYATEIAKAAGEKIDKIAILYEDTAYGTAQAKGLRDAAKKAGVEIVLDEAYPLGITDVSPLVNKLRASGAQMAFPV SYLNDSLLIIRALRQQQIDIPVIGGAAGYIIPDFKKGLGDYAEGVLSVAAASGDLIPDLAAKYKEKYGAFITHEALIHAA ALDAVAQAMEKAKSSDPQKVRDALASLDYCAGFARGVPGGCIKFDANGLNASAFPVMVQWRGDEPVTVYPPKAAKQAPIW RGKPVN
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=351, Percent_Identity=28.7749287749288, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1789867, Length=313, Percent_Identity=27.1565495207668, Blast_Score=94, Evalue=1e-20,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 42077; Mature: 42077
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSAPLDRRRAAGVMLAAGAAVFASLLQPAHAADDVVVGVIQPLSGPNAQFGIGAQRGTE CCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCHHEEEEECCCCCCCCCCCCCCHHHHH LAAEMINAAGGIKSLGGAKIKLVAADVPTPNTAAATTQRLISQNGVSAVVGAFVSSTTLA HHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH ASEVTERAGIPLVTFAFADQITGRGYQYVFQVSPKGTVFGAAQFDYATEIAKAAGEKIDK HHHHHHHCCCCEEEEEHHHHHCCCCEEEEEEECCCCCEEECHHHHHHHHHHHHHCCCCCE IAILYEDTAYGTAQAKGLRDAAKKAGVEIVLDEAYPLGITDVSPLVNKLRASGAQMAFPV EEEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEH SYLNDSLLIIRALRQQQIDIPVIGGAAGYIIPDFKKGLGDYAEGVLSVAAASGDLIPDLA HHHCCHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH AKYKEKYGAFITHEALIHAAALDAVAQAMEKAKSSDPQKVRDALASLDYCAGFARGVPGG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC CIKFDANGLNASAFPVMVQWRGDEPVTVYPPKAAKQAPIWRGKPVN EEEECCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MMSAPLDRRRAAGVMLAAGAAVFASLLQPAHAADDVVVGVIQPLSGPNAQFGIGAQRGTE CCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCHHEEEEECCCCCCCCCCCCCCHHHHH LAAEMINAAGGIKSLGGAKIKLVAADVPTPNTAAATTQRLISQNGVSAVVGAFVSSTTLA HHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH ASEVTERAGIPLVTFAFADQITGRGYQYVFQVSPKGTVFGAAQFDYATEIAKAAGEKIDK HHHHHHHCCCCEEEEEHHHHHCCCCEEEEEEECCCCCEEECHHHHHHHHHHHHHCCCCCE IAILYEDTAYGTAQAKGLRDAAKKAGVEIVLDEAYPLGITDVSPLVNKLRASGAQMAFPV EEEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEH SYLNDSLLIIRALRQQQIDIPVIGGAAGYIIPDFKKGLGDYAEGVLSVAAASGDLIPDLA HHHCCHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH AKYKEKYGAFITHEALIHAAALDAVAQAMEKAKSSDPQKVRDALASLDYCAGFARGVPGG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC CIKFDANGLNASAFPVMVQWRGDEPVTVYPPKAAKQAPIWRGKPVN EEEECCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA