| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is braD [H]
Identifier: 154245509
GI number: 154245509
Start: 1774371
End: 1775222
Strand: Direct
Name: braD [H]
Synonym: Xaut_1563
Alternate gene names: 154245509
Gene position: 1774371-1775222 (Clockwise)
Preceding gene: 154245508
Following gene: 154245510
Centisome position: 33.42
GC content: 65.96
Gene sequence:
>852_bases ATGCTTCAGGCCCTTGTCGATGGTCTCCTCCTGGGTGGCGTCTATGGCGTCATCGCCACCGGCCTCTCGCTGGTGTTCGG CGTGCTCGGGGTGGTCAATTTCGCCCATGCCGAATTCCTCATGCTCGGAATGTACGTGGCCTGGTTCGCCTGGCGCTATC TGGGGCTCGATCCGCTGATCGGATCGGTGCTGTCCTTCGTCGTGGTGTTCGCCGTGGGCTATGGGGTCCAGCGCACGCTC ATTCAGCGCGTGCTGAAGGCGCCGCCGGCGGCGCAGGTTTTTCTCACCGTGGGCCTGATGATCGTCATCGAGAATGCCGC TCTGATGGTCTTCGGCTCCGACTTCCGGTCGGTGAGCGTGCCCTATCAGGTGGAAGGCTACAGGCTCGGCGACATCTTCA TCGGCGCGCCCTACCTCTACGCCTTCATCGCCGCCGTCATTCTGGCCGCCGCACTTTGGCTGTTCCTCGACCGCTCCTGG ATGGGCCGGGCCATCCGCGCCGTGGCGCAGGATCCCATGGCCGCGACGCTGGTGGGCGTGGATACACGGCGCACCTATGG GCTGGCCTTCGGCCTCGGCGTAGCCCTCACCGCCTTCGGCGGCGCGGTCATCCTGCCCTACATCACGGTCAGCCCCACCA TCGGCGGGCAGTTCGTGGTGCTCATGTTCACGGTGGTGGTGCTGGGTGGCCTGGGCTCGGTGGCGGGGGCGCTGGCGGGC GGGATCATGGTGGGCATCGTGCAGTCCTTGTCCACCCTCGTCTTCCCCATCCAGCTGCAGAACCTCTGCCTGTTCGTGAT CTTCATCGCCGTTCTCGCCCTGCGCCCGCAGGGCCTCATCAAGGGCGCCTGA
Upstream 100 bases:
>100_bases GCAAAGCAGGCTCCCATCTGGCGCGGCAAGCCGGTGAACTGAAGCAATTCCTTTGGCCCCGCCATGTGGCGGGGCCGCCC TCCAGCCTGACGGGACGCAT
Downstream 100 bases:
>100_bases GCCATGCGACAGCTTTTCTCGCCGGGGCGCGTGGTGCTGCTCCTGTTCTTTGCCGCGGCGGCGTTGCTGCCGCTGGTGGT GGATCCGCGCGGACATCTGC
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MLQALVDGLLLGGVYGVIATGLSLVFGVLGVVNFAHAEFLMLGMYVAWFAWRYLGLDPLIGSVLSFVVVFAVGYGVQRTL IQRVLKAPPAAQVFLTVGLMIVIENAALMVFGSDFRSVSVPYQVEGYRLGDIFIGAPYLYAFIAAVILAAALWLFLDRSW MGRAIRAVAQDPMAATLVGVDTRRTYGLAFGLGVALTAFGGAVILPYITVSPTIGGQFVVLMFTVVVLGGLGSVAGALAG GIMVGIVQSLSTLVFPIQLQNLCLFVIFIAVLALRPQGLIKGA
Sequences:
>Translated_283_residues MLQALVDGLLLGGVYGVIATGLSLVFGVLGVVNFAHAEFLMLGMYVAWFAWRYLGLDPLIGSVLSFVVVFAVGYGVQRTL IQRVLKAPPAAQVFLTVGLMIVIENAALMVFGSDFRSVSVPYQVEGYRLGDIFIGAPYLYAFIAAVILAAALWLFLDRSW MGRAIRAVAQDPMAATLVGVDTRRTYGLAFGLGVALTAFGGAVILPYITVSPTIGGQFVVLMFTVVVLGGLGSVAGALAG GIMVGIVQSLSTLVFPIQLQNLCLFVIFIAVLALRPQGLIKGA >Mature_283_residues MLQALVDGLLLGGVYGVIATGLSLVFGVLGVVNFAHAEFLMLGMYVAWFAWRYLGLDPLIGSVLSFVVVFAVGYGVQRTL IQRVLKAPPAAQVFLTVGLMIVIENAALMVFGSDFRSVSVPYQVEGYRLGDIFIGAPYLYAFIAAVILAAALWLFLDRSW MGRAIRAVAQDPMAATLVGVDTRRTYGLAFGLGVALTAFGGAVILPYITVSPTIGGQFVVLMFTVVVLGGLGSVAGALAG GIMVGIVQSLSTLVFPIQLQNLCLFVIFIAVLALRPQGLIKGA
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789866, Length=294, Percent_Identity=31.6326530612245, Blast_Score=114, Evalue=5e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 29854; Mature: 29854
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQALVDGLLLGGVYGVIATGLSLVFGVLGVVNFAHAEFLMLGMYVAWFAWRYLGLDPLI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH GSVLSFVVVFAVGYGVQRTLIQRVLKAPPAAQVFLTVGLMIVIENAALMVFGSDFRSVSV HHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC PYQVEGYRLGDIFIGAPYLYAFIAAVILAAALWLFLDRSWMGRAIRAVAQDPMAATLVGV CEEECCEEECCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEC DTRRTYGLAFGLGVALTAFGGAVILPYITVSPTIGGQFVVLMFTVVVLGGLGSVAGALAG CCCHHHHHHHHHHHHHHHHCCCEEEHEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHH GIMVGIVQSLSTLVFPIQLQNLCLFVIFIAVLALRPQGLIKGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLQALVDGLLLGGVYGVIATGLSLVFGVLGVVNFAHAEFLMLGMYVAWFAWRYLGLDPLI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH GSVLSFVVVFAVGYGVQRTLIQRVLKAPPAAQVFLTVGLMIVIENAALMVFGSDFRSVSV HHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC PYQVEGYRLGDIFIGAPYLYAFIAAVILAAALWLFLDRSWMGRAIRAVAQDPMAATLVGV CEEECCEEECCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEC DTRRTYGLAFGLGVALTAFGGAVILPYITVSPTIGGQFVVLMFTVVVLGGLGSVAGALAG CCCHHHHHHHHHHHHHHHHCCCEEEHEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHH GIMVGIVQSLSTLVFPIQLQNLCLFVIFIAVLALRPQGLIKGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043; 2509433 [H]