| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is glsA2 [H]
Identifier: 154245497
GI number: 154245497
Start: 1761186
End: 1763027
Strand: Reverse
Name: glsA2 [H]
Synonym: Xaut_1550
Alternate gene names: 154245497
Gene position: 1763027-1761186 (Counterclockwise)
Preceding gene: 154245502
Following gene: 154245495
Centisome position: 33.21
GC content: 68.24
Gene sequence:
>1842_bases GTGCCGAATTTCCTGCCCCTTGCCACGACGCCCCTCGAAACACCGCTGCTGCGCGCCATCCGGGATATCCACACCCGCTT CACGCCCCTGCATGACGGCGAGGTCGCCTCCTACATCCCGGAACTGGGCAAGGCCGACCCGGACCATTTCGGGATCGCCG TGGCCACCACCGACGGCCATGTCTATGAAGCGGGCGACACGGCCGTGCCGTTCACCATCCAGTCGGTGTCCAAGGCCATC GTCTACGCCCTCGCCCTCGACATGCTGGGGTCCGAGAAGGTGGAGGCAGCCATCGGCGTGGAGCCGAGCGGCGAGGCCTT CAATTCCATCCGCCTGAAGGCCGACAACCGCCCCTTCAACGCCATGGTGAATGCCGGCGCCATCTGCTGCAGCGGGCTTC TCGCCGAGGCTGCCGGCGACGAGGCCTTCGAGCTGATCCGCACCACGCTCAGCCGCTTTGCCGGGCGCGAGCTGGAGGTG GACGATGCGGTGTTCCAGTCGGAGCGCCAGACCGGCGACCGCAACCGCGCCATCGCCTACCTGCTGCGCACCTATGGCGG CGTGCGGGGCGACGTGGATCACATCCTCGACACCTATTTCCGCCAGTGCTCGGTTCTGGTCACCGCCCGCGACCTGGCGG TGATGGGGGCGAGCTTCGCCAATCACGGGGTCAATCCGGTGACCGGGGAGATGGTGGCCTCAAACTACGCCGTGGCGCGC ACCCTGGCGGTGATGATCTCCTCCGGCATGTATGACTTTGCCGGCGAGTGGATCTATCGGGTGGGCGTGCCGGCCAAGAG CGGCGTCGGTGGCGGCATTCTCGCCGCTTTGCCCTCCCAGCTGGGCCTCGGCATCTTCTCGCCCCGGCTCGATGCCCATG GCAACAGCGTGCGCGGCCTGCGCACCTGCTCCGCCCTCTCCGACGCCTTCGACCTGCACATGCTGTCGCGGCGCGACGAC GTGCGCACCTGCATCGCCGCCGACTACGATTTCCGCACCGTGCCCTCCAAGCCCGGGCGCCAGCCCCACGAGCAGAGCAT CCTGGAACAGCGCTCCGGCTCCATCCGCGTGCTGGAACTGGCCGGCAAGCTCTCCTTCGCCACCATGGATTATGTGACCC GCCGGCTCACCGATCCCGCAGGCGTGCCGGCCTTCCTGATCCTCAACCTGCACCGGGTCTCCACCATCACCGATGCGGGG CTGCGCCTGTTCACCGGCCTGATCCGCAATCAGCTTCCGGCCTCCACCACCACGGTGATCGCCGGAGTTGAAGGCAACTC GCCGGTGGCGCCGCAGGTCAAGGCCATGAAGGAGGAAGGCGTGCGCGTGCGCATCTTCCCCACCTACGACGCCGCCGTGG ACTGGGCCGAGGACCAGATCGTCTACCGCCATGGCGGCTTCTCGCAGATCGGCATCGAAGCCGACCTGTCAGGCCAGGCG CTGCTCGCCGGGCTGTCGCCGCAGGAACTGGCCGACCTCTCCCGCCTCGGCACCCGCGTGGTGTTCGATGCCGGCACGCG GATCATCGACGCCAATGAACCGCCGGCCCGGGTCTATTTCCTGGTGCGCGGCATGGTCAGCGTGCGCTCAATGCACGACG TGCGCCTGTCGACGTTGATCCCGGGCATGGCCTTCGGCGAGCTGGCGCTCATCGATCAGCCGCGCAGTGCCGACGTGTGG GCCGACACGGAGGCGGTCTGCCTGGAGATTTCCGCCGAGCAGTTCCGCGCCTTCCAGGAGACCCATGCCCGCGCCGCCGA CCGGATCATGCGCAACCTCGCCATCCTGCTGGCCGGCCGGGTGCGCATGGCCACGGCGCGGATCGACATGCTGACGGGGT GA
Upstream 100 bases:
>100_bases CGTGCCGATGGCCGGGAACGGAGCGCGGTTTGCCGCCGCGCACCATTGCCAACCGCAGCGCACGCGCTTTCACTAGGGGA GAGTCGCCCGGAGCCGCGCT
Downstream 100 bases:
>100_bases CACCTCGCCGGCACGACGCAGTCCGCCGAGTGGCTCGCCTACGCCACCTCGTCGCTCACCACCTTGAAGGTCGTAAGCGT CGCCGGGCCGAAGGTGGTGA
Product: cyclic nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 613; Mature: 612
Protein sequence:
>613_residues MPNFLPLATTPLETPLLRAIRDIHTRFTPLHDGEVASYIPELGKADPDHFGIAVATTDGHVYEAGDTAVPFTIQSVSKAI VYALALDMLGSEKVEAAIGVEPSGEAFNSIRLKADNRPFNAMVNAGAICCSGLLAEAAGDEAFELIRTTLSRFAGRELEV DDAVFQSERQTGDRNRAIAYLLRTYGGVRGDVDHILDTYFRQCSVLVTARDLAVMGASFANHGVNPVTGEMVASNYAVAR TLAVMISSGMYDFAGEWIYRVGVPAKSGVGGGILAALPSQLGLGIFSPRLDAHGNSVRGLRTCSALSDAFDLHMLSRRDD VRTCIAADYDFRTVPSKPGRQPHEQSILEQRSGSIRVLELAGKLSFATMDYVTRRLTDPAGVPAFLILNLHRVSTITDAG LRLFTGLIRNQLPASTTTVIAGVEGNSPVAPQVKAMKEEGVRVRIFPTYDAAVDWAEDQIVYRHGGFSQIGIEADLSGQA LLAGLSPQELADLSRLGTRVVFDAGTRIIDANEPPARVYFLVRGMVSVRSMHDVRLSTLIPGMAFGELALIDQPRSADVW ADTEAVCLEISAEQFRAFQETHARAADRIMRNLAILLAGRVRMATARIDMLTG
Sequences:
>Translated_613_residues MPNFLPLATTPLETPLLRAIRDIHTRFTPLHDGEVASYIPELGKADPDHFGIAVATTDGHVYEAGDTAVPFTIQSVSKAI VYALALDMLGSEKVEAAIGVEPSGEAFNSIRLKADNRPFNAMVNAGAICCSGLLAEAAGDEAFELIRTTLSRFAGRELEV DDAVFQSERQTGDRNRAIAYLLRTYGGVRGDVDHILDTYFRQCSVLVTARDLAVMGASFANHGVNPVTGEMVASNYAVAR TLAVMISSGMYDFAGEWIYRVGVPAKSGVGGGILAALPSQLGLGIFSPRLDAHGNSVRGLRTCSALSDAFDLHMLSRRDD VRTCIAADYDFRTVPSKPGRQPHEQSILEQRSGSIRVLELAGKLSFATMDYVTRRLTDPAGVPAFLILNLHRVSTITDAG LRLFTGLIRNQLPASTTTVIAGVEGNSPVAPQVKAMKEEGVRVRIFPTYDAAVDWAEDQIVYRHGGFSQIGIEADLSGQA LLAGLSPQELADLSRLGTRVVFDAGTRIIDANEPPARVYFLVRGMVSVRSMHDVRLSTLIPGMAFGELALIDQPRSADVW ADTEAVCLEISAEQFRAFQETHARAADRIMRNLAILLAGRVRMATARIDMLTG >Mature_612_residues PNFLPLATTPLETPLLRAIRDIHTRFTPLHDGEVASYIPELGKADPDHFGIAVATTDGHVYEAGDTAVPFTIQSVSKAIV YALALDMLGSEKVEAAIGVEPSGEAFNSIRLKADNRPFNAMVNAGAICCSGLLAEAAGDEAFELIRTTLSRFAGRELEVD DAVFQSERQTGDRNRAIAYLLRTYGGVRGDVDHILDTYFRQCSVLVTARDLAVMGASFANHGVNPVTGEMVASNYAVART LAVMISSGMYDFAGEWIYRVGVPAKSGVGGGILAALPSQLGLGIFSPRLDAHGNSVRGLRTCSALSDAFDLHMLSRRDDV RTCIAADYDFRTVPSKPGRQPHEQSILEQRSGSIRVLELAGKLSFATMDYVTRRLTDPAGVPAFLILNLHRVSTITDAGL RLFTGLIRNQLPASTTTVIAGVEGNSPVAPQVKAMKEEGVRVRIFPTYDAAVDWAEDQIVYRHGGFSQIGIEADLSGQAL LAGLSPQELADLSRLGTRVVFDAGTRIIDANEPPARVYFLVRGMVSVRSMHDVRLSTLIPGMAFGELALIDQPRSADVWA DTEAVCLEISAEQFRAFQETHARAADRIMRNLAILLAGRVRMATARIDMLTG
Specific function: Unknown
COG id: COG2066
COG function: function code E; Glutaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 STAS domain [H]
Homologues:
Organism=Homo sapiens, GI156104878, Length=285, Percent_Identity=45.6140350877193, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI20336214, Length=296, Percent_Identity=42.9054054054054, Blast_Score=244, Evalue=2e-64, Organism=Escherichia coli, GI1786693, Length=303, Percent_Identity=39.2739273927393, Blast_Score=213, Evalue=2e-56, Organism=Escherichia coli, GI1787804, Length=297, Percent_Identity=35.3535353535354, Blast_Score=175, Evalue=7e-45, Organism=Caenorhabditis elegans, GI17507019, Length=287, Percent_Identity=40.418118466899, Blast_Score=234, Evalue=8e-62, Organism=Caenorhabditis elegans, GI17532727, Length=299, Percent_Identity=38.7959866220736, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI193204073, Length=295, Percent_Identity=37.6271186440678, Blast_Score=212, Evalue=4e-55, Organism=Caenorhabditis elegans, GI193204075, Length=297, Percent_Identity=37.3737373737374, Blast_Score=211, Evalue=8e-55, Organism=Drosophila melanogaster, GI281363239, Length=320, Percent_Identity=38.125, Blast_Score=235, Evalue=8e-62, Organism=Drosophila melanogaster, GI281363241, Length=320, Percent_Identity=38.125, Blast_Score=234, Evalue=9e-62, Organism=Drosophila melanogaster, GI24653162, Length=320, Percent_Identity=38.125, Blast_Score=234, Evalue=9e-62, Organism=Drosophila melanogaster, GI24653158, Length=326, Percent_Identity=38.0368098159509, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24653156, Length=326, Percent_Identity=38.0368098159509, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24653164, Length=320, Percent_Identity=38.125, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI116008307, Length=326, Percent_Identity=38.0368098159509, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24653166, Length=326, Percent_Identity=38.0368098159509, Blast_Score=234, Evalue=1e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR018490 - InterPro: IPR018488 - InterPro: IPR000595 - InterPro: IPR015868 - InterPro: IPR014710 - InterPro: IPR002645 [H]
Pfam domain/function: PF00027 cNMP_binding; PF04960 Glutaminase; PF01740 STAS [H]
EC number: =3.5.1.2 [H]
Molecular weight: Translated: 66189; Mature: 66058
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: PS50042 CNMP_BINDING_3 ; PS50801 STAS ; PS00146 BETA_LACTAMASE_A
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNFLPLATTPLETPLLRAIRDIHTRFTPLHDGEVASYIPELGKADPDHFGIAVATTDGH CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCE VYEAGDTAVPFTIQSVSKAIVYALALDMLGSEKVEAAIGVEPSGEAFNSIRLKADNRPFN EEECCCCCCCEEHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCEEEEEECCCCCH AMVNAGAICCSGLLAEAAGDEAFELIRTTLSRFAGRELEVDDAVFQSERQTGDRNRAIAY HHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHH LLRTYGGVRGDVDHILDTYFRQCSVLVTARDLAVMGASFANHGVNPVTGEMVASNYAVAR HHHHHCCCCCCHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH TLAVMISSGMYDFAGEWIYRVGVPAKSGVGGGILAALPSQLGLGIFSPRLDAHGNSVRGL HHHHHHHCCCHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHH RTCSALSDAFDLHMLSRRDDVRTCIAADYDFRTVPSKPGRQPHEQSILEQRSGSIRVLEL HHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEE AGKLSFATMDYVTRRLTDPAGVPAFLILNLHRVSTITDAGLRLFTGLIRNQLPASTTTVI CCCCHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE AGVEGNSPVAPQVKAMKEEGVRVRIFPTYDAAVDWAEDQIVYRHGGFSQIGIEADLSGQA EECCCCCCCCHHHHHHHHCCCEEEEEECCHHHHCCCCCEEEEECCCCCEECEEECCCCCE LLAGLSPQELADLSRLGTRVVFDAGTRIIDANEPPARVYFLVRGMVSVRSMHDVRLSTLI EEECCCHHHHHHHHHCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHC PGMAFGELALIDQPRSADVWADTEAVCLEISAEQFRAFQETHARAADRIMRNLAILLAGR CCCCCCCEEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCH VRMATARIDMLTG HHEEHHHEEECCC >Mature Secondary Structure PNFLPLATTPLETPLLRAIRDIHTRFTPLHDGEVASYIPELGKADPDHFGIAVATTDGH CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCE VYEAGDTAVPFTIQSVSKAIVYALALDMLGSEKVEAAIGVEPSGEAFNSIRLKADNRPFN EEECCCCCCCEEHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCEEEEEECCCCCH AMVNAGAICCSGLLAEAAGDEAFELIRTTLSRFAGRELEVDDAVFQSERQTGDRNRAIAY HHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHH LLRTYGGVRGDVDHILDTYFRQCSVLVTARDLAVMGASFANHGVNPVTGEMVASNYAVAR HHHHHCCCCCCHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH TLAVMISSGMYDFAGEWIYRVGVPAKSGVGGGILAALPSQLGLGIFSPRLDAHGNSVRGL HHHHHHHCCCHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHH RTCSALSDAFDLHMLSRRDDVRTCIAADYDFRTVPSKPGRQPHEQSILEQRSGSIRVLEL HHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEE AGKLSFATMDYVTRRLTDPAGVPAFLILNLHRVSTITDAGLRLFTGLIRNQLPASTTTVI CCCCHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE AGVEGNSPVAPQVKAMKEEGVRVRIFPTYDAAVDWAEDQIVYRHGGFSQIGIEADLSGQA EECCCCCCCCHHHHHHHHCCCEEEEEECCHHHHCCCCCEEEEECCCCCEECEEECCCCCE LLAGLSPQELADLSRLGTRVVFDAGTRIIDANEPPARVYFLVRGMVSVRSMHDVRLSTLI EEECCCHHHHHHHHHCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHC PGMAFGELALIDQPRSADVWADTEAVCLEISAEQFRAFQETHARAADRIMRNLAILLAGR CCCCCCCEEEECCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCH VRMATARIDMLTG HHEEHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]