| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245502
Identifier: 154245502
GI number: 154245502
Start: 1766726
End: 1767598
Strand: Reverse
Name: 154245502
Synonym: Xaut_1555
Alternate gene names: NA
Gene position: 1767598-1766726 (Counterclockwise)
Preceding gene: 154245506
Following gene: 154245497
Centisome position: 33.29
GC content: 65.98
Gene sequence:
>873_bases GTGGAGTACCCGTTGAGCCTCCTTAAGATCCGCCACACTACCACCTATCGCTTTCACCGGCCGGTCGCTTTCGGACCCCA CCGCCTGATGCTCCGCCCCCGTGAAAGCCGGGACCTGCGCGTGATCTCCAATTCCATCACCCTCACTCCGCAAGCGAGCG TGAGCTGGGCGCACGACGTTTCCGGCAATGCGGTGGCCACCGCCACCTTCCAGGTGGGCGCCGACCTGCTGGTGGTGGAG AGCCTGACCCAGATCCAGCTGGACGCGGTAGCCTGGCCGGTATTCGATATTGCAGGCTCCGCCCAGTCCTTCCCGTTCCG CTATTCCGACGACGAGTGGAAGGACCTCGGAGTCCTCGGCACCCCGCAATATCCCGATCCCAGCAACCAGTTGCGCGCTT GGGCCCAAGGCTTCGTCTGCGCGATGCCCACCGACACGCTGTCCCTGCTCAAGGACCTCAGCACCGGCGTCTCCCAGGCC ATCAACTACCAGAGCCGCGACGAGGAGGGCACGCAAGCCCCGGTCCAGACCCTGCAGCGGGGCTGGGGATCGTGCCGGGA TTTCGCGGTGCTGTTCGTGGAGGCGGCACGCAGCCTCGGCTTCGGAGCACGCATCGTGTCCGGCTATCTCCACAATCCTG ACCAGAGCCAGACGGGATCTTCGGGCGCGGGATCAACCCATGCCTGGGGCGAAGTGTTCGTGCCGGGGGCGGGCTGGATC CCGTTCGATCCCACCAACCGCAGCATGGGCGGGTCCAACCTCATCCCCGTCGCCGTGGTCAGGGATATCCGCCAGGCCAT TCCGGTGGCCGGCAGCTTCATCGGCGATACCCTCGCCTTCCGGGACATGAGCGTGGATGTGCGGGTCTGGTGA
Upstream 100 bases:
>100_bases GAATGCCACCCGCCCCGGGCCCCCGCGGCCGCCGGAAGCGGCACCGGGAAACCTTGCGGTGGTGTCGTAGTCATGCGCTG ATAAGGTGGTTTCTCTCGCT
Downstream 100 bases:
>100_bases GGCGGCGCACCGCCTCACTGGTTCTCCTATGAGCGGGCGTGCGACTGCGAAGACTTCGGCTCGTCCTTGTGGTCATGGAG AAAACGCGCGATGAGCACCT
Product: transglutaminase domain-containing protein
Products: NA
Alternate protein names: Transglutaminase Domain Protein; Transglutaminase-Like; Transglutaminase-Like Protein; Transglutaminase Family Protein; Transglutaminase-Like Superfamily Protein; Transglutaminase-Like Domain-Containing Protein; Transglutaminase; Transglutaminase-Like Domain Protein; Bacterial Transglutaminase-Like Domain Family Protein; Transglutaminase-Like Family Protein; Protease; Bacterial Transglutaminase Domain Family Protein; IMP Dehydrogenase; Malate Oxidoreductase; Transglutaminase N-Domain Protein; Cysteine Protease; Transglutaminase DomaiN-Containing Protein; Transglutaminase N-Terminal Domain Protein; Transglutaminase-Like Super Family Protein; Transglutaminase-Like Superfamily Domain-Containing Protein; Transglutaminase-Like Cysteine Protease; Transglutaminase-Like Superfamily Domain Protein
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MEYPLSLLKIRHTTTYRFHRPVAFGPHRLMLRPRESRDLRVISNSITLTPQASVSWAHDVSGNAVATATFQVGADLLVVE SLTQIQLDAVAWPVFDIAGSAQSFPFRYSDDEWKDLGVLGTPQYPDPSNQLRAWAQGFVCAMPTDTLSLLKDLSTGVSQA INYQSRDEEGTQAPVQTLQRGWGSCRDFAVLFVEAARSLGFGARIVSGYLHNPDQSQTGSSGAGSTHAWGEVFVPGAGWI PFDPTNRSMGGSNLIPVAVVRDIRQAIPVAGSFIGDTLAFRDMSVDVRVW
Sequences:
>Translated_290_residues MEYPLSLLKIRHTTTYRFHRPVAFGPHRLMLRPRESRDLRVISNSITLTPQASVSWAHDVSGNAVATATFQVGADLLVVE SLTQIQLDAVAWPVFDIAGSAQSFPFRYSDDEWKDLGVLGTPQYPDPSNQLRAWAQGFVCAMPTDTLSLLKDLSTGVSQA INYQSRDEEGTQAPVQTLQRGWGSCRDFAVLFVEAARSLGFGARIVSGYLHNPDQSQTGSSGAGSTHAWGEVFVPGAGWI PFDPTNRSMGGSNLIPVAVVRDIRQAIPVAGSFIGDTLAFRDMSVDVRVW >Mature_290_residues MEYPLSLLKIRHTTTYRFHRPVAFGPHRLMLRPRESRDLRVISNSITLTPQASVSWAHDVSGNAVATATFQVGADLLVVE SLTQIQLDAVAWPVFDIAGSAQSFPFRYSDDEWKDLGVLGTPQYPDPSNQLRAWAQGFVCAMPTDTLSLLKDLSTGVSQA INYQSRDEEGTQAPVQTLQRGWGSCRDFAVLFVEAARSLGFGARIVSGYLHNPDQSQTGSSGAGSTHAWGEVFVPGAGWI PFDPTNRSMGGSNLIPVAVVRDIRQAIPVAGSFIGDTLAFRDMSVDVRVW
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31668; Mature: 31668
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYPLSLLKIRHTTTYRFHRPVAFGPHRLMLRPRESRDLRVISNSITLTPQASVSWAHDV CCCCCCHHEEECCEEEEEECCCEECCCEEEECCCCCCCEEEEECEEEECCCCCCCEEECC SGNAVATATFQVGADLLVVESLTQIQLDAVAWPVFDIAGSAQSFPFRYSDDEWKDLGVLG CCCEEEEEEEHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCC TPQYPDPSNQLRAWAQGFVCAMPTDTLSLLKDLSTGVSQAINYQSRDEEGTQAPVQTLQR CCCCCCCHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH GWGSCRDFAVLFVEAARSLGFGARIVSGYLHNPDQSQTGSSGAGSTHAWGEVFVPGAGWI HCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC PFDPTNRSMGGSNLIPVAVVRDIRQAIPVAGSFIGDTLAFRDMSVDVRVW CCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHEEECCEEEEEEC >Mature Secondary Structure MEYPLSLLKIRHTTTYRFHRPVAFGPHRLMLRPRESRDLRVISNSITLTPQASVSWAHDV CCCCCCHHEEECCEEEEEECCCEECCCEEEECCCCCCCEEEEECEEEECCCCCCCEEECC SGNAVATATFQVGADLLVVESLTQIQLDAVAWPVFDIAGSAQSFPFRYSDDEWKDLGVLG CCCEEEEEEEHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCC TPQYPDPSNQLRAWAQGFVCAMPTDTLSLLKDLSTGVSQAINYQSRDEEGTQAPVQTLQR CCCCCCCHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH GWGSCRDFAVLFVEAARSLGFGARIVSGYLHNPDQSQTGSSGAGSTHAWGEVFVPGAGWI HCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC PFDPTNRSMGGSNLIPVAVVRDIRQAIPVAGSFIGDTLAFRDMSVDVRVW CCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHEEECCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA