Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is nutA [H]

Identifier: 154245466

GI number: 154245466

Start: 1728687

End: 1730378

Strand: Reverse

Name: nutA [H]

Synonym: Xaut_1519

Alternate gene names: 154245466

Gene position: 1730378-1728687 (Counterclockwise)

Preceding gene: 154245467

Following gene: 154245465

Centisome position: 32.59

GC content: 66.31

Gene sequence:

>1692_bases
ATGATCTCAAGGCGCGATTTTCTGTCCGCCGGGACGGCGCTCGCCGGCCTTCTCGCCGCCTCGGGACCGGGGCTGGCGCA
GGCCATCGGCGGGCAATTGACCCAGAATGACCTCTTGAAGTTCGGCAGGATCGGCACCTTCACTATTCTGCATGTCACCG
ACATCCATGCCCAGCTCAATCCGCTCTACTTCCGTGAACCGTCTATCAATTTGGGCGTCGGCGACGCGCGGGGCGTGCCG
CCGCACCTGACCGATATGGCCTTCCTCAACTACTTCAACATCAGGCCGGGCACGCGCGACGCCTATGCGCTGACTTCGGA
GGACTTCACGGCGCTCGCCCGCAGCTATGGCCGCATGGGCGGGGTGGACCGCATCGCCACCCTCATCAAGGCCATCCGCG
CCGAGCGGGGGGCGGACAAGGTGCTGCTGCTCGACGGCGGCGACGGGCTGCAGGGCTCGTGGTCGTCGCTGCAGACCAAG
GGCGAGGACATGGTGCGGGTGTTCTCCGCCCTCGGGCTCGACGCCATGGTGGGGCACTGGGAGTTCACCTACGGCGCCGA
CCGGGTCATGGCGATCAAGGAGAAGGCCCCCTTCGCCTTCCTCGCCCAGAATGTGCGCTCCACCGAATGGGGCGAGCCGG
TGTTCGATGCGGCGAAGACCTTCGAGAAGGGCGGCGCCAGGATCGCCGTCATCGGCCAGGCCTTCCCGCGTACCCCCATC
TCCAACCCGCGCTGGATGATCCCGGACTGGGAGTTCGGCATCCGCGAGGAGGAGATGCAAAGACAAGTGGATGCTGCCCG
TGCCGGCGGCGCCGACGTGGTGGTGCTGCTCTCCCACAACGGCTTCGACGTGGACCGCAAGATGGCCACGCGGGTGAAGG
GCATCGACGTGATCCTCACCGCCCACACCCATGATGCCATGCCCGCCGCCACCGAGGTGGGCAAGACTCTGCTGATCGCC
ACCGGCTCCCACGGCAAGTTCCTGTCCCGCCTCGATCTCGACGTTCAGGACAAGAAGGTCACCGGCTACAGGTTCCAGCT
GATCCCGGTGTTCTCGGACGTGATCGCGCCCGATCCGGAGATGACGAAGCTGGTGGCGGACATCCGCGCGCCTTATGCCA
AGGACCTTGCCCGTGAGGTGGGCCGGGCGGAAAGCCTGCTGTACCGGCGCGGCAACTTCAACGGCACCTTCGACGACATG
ATCTGCGACGCGCTCCTCAAGGAGCGGGACGCGGAAATCGCCCTTTCCCCCGGCTTTCGCTGGGGCGGCACGCTGCTCCC
GGGCGATCCCATCACCTTCGAGACCATCTCCAACGCCACCGCCATCACCTATCCGGCCTGCTACCGCAACACCATGACCG
GCCGGCAGCTGAAGGACGTGCTGGAGGATGTGGCCGACAACATCTTCCATCCCGACCCCTATTTCCAGGGCGGCGGCGAC
ATGGTGCGGGTGGGGGGCGTGGGCTATGCCATCGACGTGTCGAAGGGCGTCGGCCAGCGCATCTCCGACCTTACCTTCCT
GAAGACCGGCAAGCCGCTGGAGGCGGACAAGACCTATACGGTCGCCGGCTGGGCCTCGGTCGCGCAGACCGTGGAAGGCC
CGCCCATCTGGGAGGTGGTGGAGCGCTACGTGGCCAACGCCAAGACGGTGAAGATCGCGCCCAATGCGTCGGTGAAGGTG
ACGGGGGCGTGA

Upstream 100 bases:

>100_bases
TAAATCCGCCCCTTATCTGGATTTCGGGAGCGCTACACATCCGGATCACGAGGTGATCCGGACAACGCTACCCCCATGAC
TTTTGGAAAGCGCGATCACC

Downstream 100 bases:

>100_bases
GGTAAATGCCGACTTGCCCCCGACAAGCCGGGCCGCCTCAGGCACCCGATTTCGCCGAAAATATTCAAACAAACGAATAA
AAGAATACCAGGGAGGACAC

Product: 5'-nucleotidase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MISRRDFLSAGTALAGLLAASGPGLAQAIGGQLTQNDLLKFGRIGTFTILHVTDIHAQLNPLYFREPSINLGVGDARGVP
PHLTDMAFLNYFNIRPGTRDAYALTSEDFTALARSYGRMGGVDRIATLIKAIRAERGADKVLLLDGGDGLQGSWSSLQTK
GEDMVRVFSALGLDAMVGHWEFTYGADRVMAIKEKAPFAFLAQNVRSTEWGEPVFDAAKTFEKGGARIAVIGQAFPRTPI
SNPRWMIPDWEFGIREEEMQRQVDAARAGGADVVVLLSHNGFDVDRKMATRVKGIDVILTAHTHDAMPAATEVGKTLLIA
TGSHGKFLSRLDLDVQDKKVTGYRFQLIPVFSDVIAPDPEMTKLVADIRAPYAKDLAREVGRAESLLYRRGNFNGTFDDM
ICDALLKERDAEIALSPGFRWGGTLLPGDPITFETISNATAITYPACYRNTMTGRQLKDVLEDVADNIFHPDPYFQGGGD
MVRVGGVGYAIDVSKGVGQRISDLTFLKTGKPLEADKTYTVAGWASVAQTVEGPPIWEVVERYVANAKTVKIAPNASVKV
TGA

Sequences:

>Translated_563_residues
MISRRDFLSAGTALAGLLAASGPGLAQAIGGQLTQNDLLKFGRIGTFTILHVTDIHAQLNPLYFREPSINLGVGDARGVP
PHLTDMAFLNYFNIRPGTRDAYALTSEDFTALARSYGRMGGVDRIATLIKAIRAERGADKVLLLDGGDGLQGSWSSLQTK
GEDMVRVFSALGLDAMVGHWEFTYGADRVMAIKEKAPFAFLAQNVRSTEWGEPVFDAAKTFEKGGARIAVIGQAFPRTPI
SNPRWMIPDWEFGIREEEMQRQVDAARAGGADVVVLLSHNGFDVDRKMATRVKGIDVILTAHTHDAMPAATEVGKTLLIA
TGSHGKFLSRLDLDVQDKKVTGYRFQLIPVFSDVIAPDPEMTKLVADIRAPYAKDLAREVGRAESLLYRRGNFNGTFDDM
ICDALLKERDAEIALSPGFRWGGTLLPGDPITFETISNATAITYPACYRNTMTGRQLKDVLEDVADNIFHPDPYFQGGGD
MVRVGGVGYAIDVSKGVGQRISDLTFLKTGKPLEADKTYTVAGWASVAQTVEGPPIWEVVERYVANAKTVKIAPNASVKV
TGA
>Mature_563_residues
MISRRDFLSAGTALAGLLAASGPGLAQAIGGQLTQNDLLKFGRIGTFTILHVTDIHAQLNPLYFREPSINLGVGDARGVP
PHLTDMAFLNYFNIRPGTRDAYALTSEDFTALARSYGRMGGVDRIATLIKAIRAERGADKVLLLDGGDGLQGSWSSLQTK
GEDMVRVFSALGLDAMVGHWEFTYGADRVMAIKEKAPFAFLAQNVRSTEWGEPVFDAAKTFEKGGARIAVIGQAFPRTPI
SNPRWMIPDWEFGIREEEMQRQVDAARAGGADVVVLLSHNGFDVDRKMATRVKGIDVILTAHTHDAMPAATEVGKTLLIA
TGSHGKFLSRLDLDVQDKKVTGYRFQLIPVFSDVIAPDPEMTKLVADIRAPYAKDLAREVGRAESLLYRRGNFNGTFDDM
ICDALLKERDAEIALSPGFRWGGTLLPGDPITFETISNATAITYPACYRNTMTGRQLKDVLEDVADNIFHPDPYFQGGGD
MVRVGGVGYAIDVSKGVGQRISDLTFLKTGKPLEADKTYTVAGWASVAQTVEGPPIWEVVERYVANAKTVKIAPNASVKV
TGA

Specific function: Degradation of extracellular 5'-nucleotides for nutritional needs [H]

COG id: COG0737

COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5'-nucleotidase family [H]

Homologues:

Organism=Homo sapiens, GI4505467, Length=471, Percent_Identity=25.0530785562633, Blast_Score=90, Evalue=7e-18,
Organism=Escherichia coli, GI1786687, Length=457, Percent_Identity=22.7571115973742, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008334
- InterPro:   IPR006146
- InterPro:   IPR006179
- InterPro:   IPR004843 [H]

Pfam domain/function: PF02872 5_nucleotid_C; PF00149 Metallophos [H]

EC number: =3.1.3.5 [H]

Molecular weight: Translated: 61116; Mature: 61116

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISRRDFLSAGTALAGLLAASGPGLAQAIGGQLTQNDLLKFGRIGTFTILHVTDIHAQLN
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHCCCCEEEEEEEEEHHHHCC
PLYFREPSINLGVGDARGVPPHLTDMAFLNYFNIRPGTRDAYALTSEDFTALARSYGRMG
CEEEECCCCEECCCCCCCCCCCHHHHHHHHEEECCCCCCCCEEECCHHHHHHHHHHHCCC
GVDRIATLIKAIRAERGADKVLLLDGGDGLQGSWSSLQTKGEDMVRVFSALGLDAMVGHW
CHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHCHHHHHCCE
EFTYGADRVMAIKEKAPFAFLAQNVRSTEWGEPVFDAAKTFEKGGARIAVIGQAFPRTPI
EEECCCCEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCC
SNPRWMIPDWEFGIREEEMQRQVDAARAGGADVVVLLSHNGFDVDRKMATRVKGIDVILT
CCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCEEEEEE
AHTHDAMPAATEVGKTLLIATGSHGKFLSRLDLDVQDKKVTGYRFQLIPVFSDVIAPDPE
ECCCCCCCCHHHCCCEEEEEECCCCCCHHHCCCCCCCCEECCEEEEEEEHHHHHHCCCHH
MTKLVADIRAPYAKDLAREVGRAESLLYRRGNFNGTFDDMICDALLKERDAEIALSPGFR
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEECCCCC
WGGTLLPGDPITFETISNATAITYPACYRNTMTGRQLKDVLEDVADNIFHPDPYFQGGGD
CCCEECCCCCEEEEECCCCEEEEECHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
MVRVGGVGYAIDVSKGVGQRISDLTFLKTGKPLEADKTYTVAGWASVAQTVEGPPIWEVV
EEEECCEEEEEECCCCCCHHHHCEEEEECCCCCCCCCCEEEEHHHHHHHHCCCCCHHHHH
ERYVANAKTVKIAPNASVKVTGA
HHHHCCCEEEEECCCCCEEEECC
>Mature Secondary Structure
MISRRDFLSAGTALAGLLAASGPGLAQAIGGQLTQNDLLKFGRIGTFTILHVTDIHAQLN
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHCCCCEEEEEEEEEHHHHCC
PLYFREPSINLGVGDARGVPPHLTDMAFLNYFNIRPGTRDAYALTSEDFTALARSYGRMG
CEEEECCCCEECCCCCCCCCCCHHHHHHHHEEECCCCCCCCEEECCHHHHHHHHHHHCCC
GVDRIATLIKAIRAERGADKVLLLDGGDGLQGSWSSLQTKGEDMVRVFSALGLDAMVGHW
CHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHCHHHHHCCE
EFTYGADRVMAIKEKAPFAFLAQNVRSTEWGEPVFDAAKTFEKGGARIAVIGQAFPRTPI
EEECCCCEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCC
SNPRWMIPDWEFGIREEEMQRQVDAARAGGADVVVLLSHNGFDVDRKMATRVKGIDVILT
CCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCEEEEEE
AHTHDAMPAATEVGKTLLIATGSHGKFLSRLDLDVQDKKVTGYRFQLIPVFSDVIAPDPE
ECCCCCCCCHHHCCCEEEEEECCCCCCHHHCCCCCCCCEECCEEEEEEEHHHHHHCCCHH
MTKLVADIRAPYAKDLAREVGRAESLLYRRGNFNGTFDDMICDALLKERDAEIALSPGFR
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEECCCCC
WGGTLLPGDPITFETISNATAITYPACYRNTMTGRQLKDVLEDVADNIFHPDPYFQGGGD
CCCEECCCCCEEEEECCCCEEEEECHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
MVRVGGVGYAIDVSKGVGQRISDLTFLKTGKPLEADKTYTVAGWASVAQTVEGPPIWEVV
EEEECCEEEEEECCCCCCHHHHCEEEEECCCCCCCCCCEEEEHHHHHHHHCCCCCHHHHH
ERYVANAKTVKIAPNASVKVTGA
HHHHCCCEEEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA