| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245465
Identifier: 154245465
GI number: 154245465
Start: 1727263
End: 1728585
Strand: Reverse
Name: 154245465
Synonym: Xaut_1518
Alternate gene names: NA
Gene position: 1728585-1727263 (Counterclockwise)
Preceding gene: 154245466
Following gene: 154245464
Centisome position: 32.56
GC content: 67.42
Gene sequence:
>1323_bases ATGTCCGATAACCAGCTCCCAGACACCGGCCGCGCCGCCGGAAACGCTGTCGCTCCGCCGCTCTCGCGCCGCCGCTTCCT GTCCGTGGCAGGCCTTGGGGCCGGTGCGGCCGCGGCCGGCGCCGGTGCCCTGCGCCCCGGCCCCGCAGTTGCCGCCGGCC CCGACCCCAACATCGTGCCGGTGCCAGCTTGGTCGAAGACGCTGGGCCCCGGCGTCAACGTCAATCCCTACGGCAAGCCC TCGAAGTTCGAGAAGGACGTGGTGCGGCGCGAGGTGACCTGGCTCACCGCCAGCTCGGAAAGCTCGGTGAGCTTCACTCC GCTCTATGCTCTCGACGGGGTCATCACCCCCAACGGCCTGTGCTTCGTGCGCCACCATGGCGGCGAGGCGGAGATCGATC CGGACAAGTATCGTTTCATGATCCACGGCATGGTGGACAAGGAACTGGTCTTCACCCTGGACGACATCAAGCGCATGCCG GGCCGGGTCAACCGGGCCTATTTCCTCGAATGCGCGGCCAATTCCGGCATGGAGTGGCGCGGCGCGCAGCTCAACGGCTG CCAGTTCACCCACGGCATGATCCACAACGTGTTCTACACCGGCGTGCCGCTGCGCGCGTTCCTCGACATGGCCGGGGTGA AGCCCAAGGGCAAATGGGTGCTGGCCGAGGGCGCCGACGCGGCGGTGATGACGCGCTCCATTCCCATCGAGAAGGCGCTG GACGACTGCCTCGTCGCCTTCGCCATGAACGGGGAGGCGCTGCGGCCCGAGCAGGGCTATCCGGTGCGCCTCGTGGTGCC GGGCTGGGAAGGCAACATGTGGATCAAGTGGTTGCGCCGCATCAAGGTGGGCGACCAGCCGTGGCAGCAGCGCGAGGAAA CCTCGAAATACACCGACCTGCTCGCCGACGGCCGCTCCCGCCGCTTCACCTTCATCATGGATGCGAAATCCGTGGTGACG AGCCCCAGCCCGCAGGCCCCCCTGCGCCAGAAGGGGCCGAACGTGCTCACCGGCATCGCCTGGTCCGGGCGCGGCAGCAT CAAGCGGGTGGACGTGTCGCTGGATGGCGGTCGCAACTGGACCACCGCGCGCCTTGAGGGGCCGGTGATGCCCATGGCCA TGACCCGCTTCTACCTGGATTTCGACTGGGCCGGGCAGGAGCTGATGGTGCAGTCCCGCGCCATGGACGACACCGGCTAT GTGCAGCCCACCAAGAACGAGCTGCGGGCCGTGCGCGGCACCAATTCCATCTATCACAACAACGGCATCCAGACCTGGCT GGTGCGCTCCAACGGGGAGACGGAAAATGTGGAAGTCGGCTGA
Upstream 100 bases:
>100_bases GTAAATGCCGACTTGCCCCCGACAAGCCGGGCCGCCTCAGGCACCCGATTTCGCCGAAAATATTCAAACAAACGAATAAA AGAATACCAGGGAGGACACC
Downstream 100 bases:
>100_bases GGCGCTGCTGGTCGCATCCGCGCTCCTTCTCGCTGCCCCGGCCGGCGCCGCCCCCGAGGCGAAGGGCGCGCCAGCCAAGG CCGGAGCACAGAACGTCGGA
Product: molybdopterin binding oxidoreductase
Products: sulfate; H2O2
Alternate protein names: Twin-Arginine Translocation Pathway Signal; SulfiteCytochrome C Oxidoreductase Subunit A; Oxidoreductase; Nitrate Reductase; Sulfite Dehydrogenase Subunit SorA Apoprotein; Sulfite Dehydrogenase; Sulfite-Dehydrogenase; Sulfite Oxidase And ; Sulfite Dehydrogenase SoxC Protein; Sulfite Oxidase SoxC; Molybdopterin Oxidoreductase Family Protein; Sulfur Oxidation Molybdopterin C Protein; Mo-Co Oxidoreductase Dimerisation Subunit; Sulfite Dehydrogenase Subunit Sora Apoprotein; Sulfite Oxidase Molybdopterin Subunit; SulfiteCytochrome C Oxidoreductase Oxidoreductase Protein; Sulfite Dehydrogenase SoxC; Sulfite Oxidase-Like Protein; Sulfite Oxidase And Related S; Sulfite Dehydrogenase SoxC/D Homolog; Mo-Co Oxidoreductase Dimerisation Domain; Molybdopterin Dependent Oxidoreductase; Sulfur Oxidation Protein SoxC; Cytochrome C Dehydrogenase-Like Protein; Membrane-Bound Oxidoreductase; LigA Protein; Sufite Oxidase; Sulfite Reductase; Molybdopterin Oxidoreductase Domain-Containing Protein; Sulfite Oxidase Or ; Oxidase; Sulfur Dehydrogenase Subunit SoxC; Cytrochrome C Oxidoreductase Subunit A; Molybdenum Containing Oxidoreductase; Putaitve Sulfite Oxidase
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MSDNQLPDTGRAAGNAVAPPLSRRRFLSVAGLGAGAAAAGAGALRPGPAVAAGPDPNIVPVPAWSKTLGPGVNVNPYGKP SKFEKDVVRREVTWLTASSESSVSFTPLYALDGVITPNGLCFVRHHGGEAEIDPDKYRFMIHGMVDKELVFTLDDIKRMP GRVNRAYFLECAANSGMEWRGAQLNGCQFTHGMIHNVFYTGVPLRAFLDMAGVKPKGKWVLAEGADAAVMTRSIPIEKAL DDCLVAFAMNGEALRPEQGYPVRLVVPGWEGNMWIKWLRRIKVGDQPWQQREETSKYTDLLADGRSRRFTFIMDAKSVVT SPSPQAPLRQKGPNVLTGIAWSGRGSIKRVDVSLDGGRNWTTARLEGPVMPMAMTRFYLDFDWAGQELMVQSRAMDDTGY VQPTKNELRAVRGTNSIYHNNGIQTWLVRSNGETENVEVG
Sequences:
>Translated_440_residues MSDNQLPDTGRAAGNAVAPPLSRRRFLSVAGLGAGAAAAGAGALRPGPAVAAGPDPNIVPVPAWSKTLGPGVNVNPYGKP SKFEKDVVRREVTWLTASSESSVSFTPLYALDGVITPNGLCFVRHHGGEAEIDPDKYRFMIHGMVDKELVFTLDDIKRMP GRVNRAYFLECAANSGMEWRGAQLNGCQFTHGMIHNVFYTGVPLRAFLDMAGVKPKGKWVLAEGADAAVMTRSIPIEKAL DDCLVAFAMNGEALRPEQGYPVRLVVPGWEGNMWIKWLRRIKVGDQPWQQREETSKYTDLLADGRSRRFTFIMDAKSVVT SPSPQAPLRQKGPNVLTGIAWSGRGSIKRVDVSLDGGRNWTTARLEGPVMPMAMTRFYLDFDWAGQELMVQSRAMDDTGY VQPTKNELRAVRGTNSIYHNNGIQTWLVRSNGETENVEVG >Mature_439_residues SDNQLPDTGRAAGNAVAPPLSRRRFLSVAGLGAGAAAAGAGALRPGPAVAAGPDPNIVPVPAWSKTLGPGVNVNPYGKPS KFEKDVVRREVTWLTASSESSVSFTPLYALDGVITPNGLCFVRHHGGEAEIDPDKYRFMIHGMVDKELVFTLDDIKRMPG RVNRAYFLECAANSGMEWRGAQLNGCQFTHGMIHNVFYTGVPLRAFLDMAGVKPKGKWVLAEGADAAVMTRSIPIEKALD DCLVAFAMNGEALRPEQGYPVRLVVPGWEGNMWIKWLRRIKVGDQPWQQREETSKYTDLLADGRSRRFTFIMDAKSVVTS PSPQAPLRQKGPNVLTGIAWSGRGSIKRVDVSLDGGRNWTTARLEGPVMPMAMTRFYLDFDWAGQELMVQSRAMDDTGYV QPTKNELRAVRGTNSIYHNNGIQTWLVRSNGETENVEVG
Specific function: Unknown
COG id: COG2041
COG function: function code R; Sulfite oxidase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI74099704, Length=364, Percent_Identity=31.8681318681319, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI74099702, Length=364, Percent_Identity=31.8681318681319, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI74099694, Length=364, Percent_Identity=31.8681318681319, Blast_Score=96, Evalue=5e-20, Organism=Caenorhabditis elegans, GI71992535, Length=309, Percent_Identity=29.7734627831715, Blast_Score=114, Evalue=9e-26, Organism=Drosophila melanogaster, GI18859905, Length=323, Percent_Identity=32.8173374613003, Blast_Score=118, Evalue=7e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.8.3.1
Molecular weight: Translated: 48190; Mature: 48058
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNQLPDTGRAAGNAVAPPLSRRRFLSVAGLGAGAAAAGAGALRPGPAVAAGPDPNIVP CCCCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCCHHHCCCCCCCCCCCEECCCCCCEEE VPAWSKTLGPGVNVNPYGKPSKFEKDVVRREVTWLTASSESSVSFTPLYALDGVITPNGL CCCCHHHCCCCCCCCCCCCCCHHHHHHHHHEEEEEEECCCCCEEEEEHHHCCCEECCCCE CFVRHHGGEAEIDPDKYRFMIHGMVDKELVFTLDDIKRMPGRVNRAYFLECAANSGMEWR EEEEECCCCCCCCCCCEEEEEEECCCCCEEEEHHHHHCCCCCCCEEEEEEEECCCCCCCC GAQLNGCQFTHGMIHNVFYTGVPLRAFLDMAGVKPKGKWVLAEGADAAVMTRSIPIEKAL CCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCHHHHH DDCLVAFAMNGEALRPEQGYPVRLVVPGWEGNMWIKWLRRIKVGDQPWQQREETSKYTDL HHHHEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH LADGRSRRFTFIMDAKSVVTSPSPQAPLRQKGPNVLTGIAWSGRGSIKRVDVSLDGGRNW HHCCCCCEEEEEEECHHHHCCCCCCCCHHHCCCCEEEEEEECCCCCEEEEEEEECCCCCE TTARLEGPVMPMAMTRFYLDFDWAGQELMVQSRAMDDTGYVQPTKNELRAVRGTNSIYHN EEEEECCCCCHHEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEC NGIQTWLVRSNGETENVEVG CCEEEEEEECCCCCCCEECC >Mature Secondary Structure SDNQLPDTGRAAGNAVAPPLSRRRFLSVAGLGAGAAAAGAGALRPGPAVAAGPDPNIVP CCCCCCCCCCCCCCCCCCCHHHHHEEEEECCCCCHHHCCCCCCCCCCCEECCCCCCEEE VPAWSKTLGPGVNVNPYGKPSKFEKDVVRREVTWLTASSESSVSFTPLYALDGVITPNGL CCCCHHHCCCCCCCCCCCCCCHHHHHHHHHEEEEEEECCCCCEEEEEHHHCCCEECCCCE CFVRHHGGEAEIDPDKYRFMIHGMVDKELVFTLDDIKRMPGRVNRAYFLECAANSGMEWR EEEEECCCCCCCCCCCEEEEEEECCCCCEEEEHHHHHCCCCCCCEEEEEEEECCCCCCCC GAQLNGCQFTHGMIHNVFYTGVPLRAFLDMAGVKPKGKWVLAEGADAAVMTRSIPIEKAL CCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCHHHHH DDCLVAFAMNGEALRPEQGYPVRLVVPGWEGNMWIKWLRRIKVGDQPWQQREETSKYTDL HHHHEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH LADGRSRRFTFIMDAKSVVTSPSPQAPLRQKGPNVLTGIAWSGRGSIKRVDVSLDGGRNW HHCCCCCEEEEEEECHHHHCCCCCCCCHHHCCCCEEEEEEECCCCCEEEEEEEECCCCCE TTARLEGPVMPMAMTRFYLDFDWAGQELMVQSRAMDDTGYVQPTKNELRAVRGTNSIYHN EEEEECCCCCHHEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEEC NGIQTWLVRSNGETENVEVG CCEEEEEEECCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: sulfite; O2; H2O
Specific reaction: sulfite + O2 + H2O = sulfate + H2O2
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA