Click here to switch to the map view.

The map label for this gene is yjbQ [C]

Identifier: 154245398

GI number: 154245398

Start: 1665041

End: 1665514

Strand: Reverse

Name: yjbQ [C]

Synonym: Xaut_1451

Alternate gene names: 154245398

Gene position: 1665514-1665041 (Counterclockwise)

Preceding gene: 154245400

Following gene: 154245397

Centisome position: 31.37

GC content: 68.14

Gene sequence:

>474_bases
ATGGCCCGCACCACCCGCTCCGCGCCGACCCTGAGCGAAGCCGTGCGCCACGCCGAGGCCCGCCTGCAGCTGACGACGCC
CGGCGAGGGCTTCACCGAGATTACCGCCGAGGCGGCAGCCTTCCTCGGCGACATCGCGGCCGGCGCGGGAGTGCTGACGG
TGTTCTGCCGCCACACCTCGGCCTCCCTGACCATCCAGGAGAATGCGGACCCTGACGTGCGCACCGACCTCCTCAGCGCT
CTCGAAAGCCTCGCGCCCCGGAATTTCGGCTGGGTCCACGACACTGAGGGGCCGGACGACATGCCGGCCCATGTGCGCAC
CCTTCTGACCGACACCAGCCTGTCCATTCCGGTAAGCCAGGGTCGCATGGCGCTCGGCACATGGCAGGGCCTTTACCTGA
TCGAGCATCGTGACCGGCCCCAGCGACGTGAGGTGGTGCTGGTATTCACGGGAACAATCGGTCATATGGCGTGA

Upstream 100 bases:

>100_bases
GGCAAAACTGGTACGAGCCGGAACCGCTCGGCGCAAGACGCCGATACCAGAAACGCCGCCGGCCGGATCATCCCTGCCGG
CGCCCCGCAGGAGACCCGCC

Downstream 100 bases:

>100_bases
TCGGCTTGTCACCGCTTCGCCACGGATTGATGATCGGGCGAGCCGATTCGCGGTGGGCGCCGTCCTCCCGCGAAGACAAG
AAGGGCGGAGCCGCCGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MARTTRSAPTLSEAVRHAEARLQLTTPGEGFTEITAEAAAFLGDIAAGAGVLTVFCRHTSASLTIQENADPDVRTDLLSA
LESLAPRNFGWVHDTEGPDDMPAHVRTLLTDTSLSIPVSQGRMALGTWQGLYLIEHRDRPQRREVVLVFTGTIGHMA

Sequences:

>Translated_157_residues
MARTTRSAPTLSEAVRHAEARLQLTTPGEGFTEITAEAAAFLGDIAAGAGVLTVFCRHTSASLTIQENADPDVRTDLLSA
LESLAPRNFGWVHDTEGPDDMPAHVRTLLTDTSLSIPVSQGRMALGTWQGLYLIEHRDRPQRREVVLVFTGTIGHMA
>Mature_156_residues
ARTTRSAPTLSEAVRHAEARLQLTTPGEGFTEITAEAAAFLGDIAAGAGVLTVFCRHTSASLTIQENADPDVRTDLLSAL
ESLAPRNFGWVHDTEGPDDMPAHVRTLLTDTSLSIPVSQGRMALGTWQGLYLIEHRDRPQRREVVLVFTGTIGHMA

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=134, Percent_Identity=39.5522388059701, Blast_Score=103, Evalue=5e-24,
Organism=Drosophila melanogaster, GI221476589, Length=135, Percent_Identity=38.5185185185185, Blast_Score=108, Evalue=2e-24,
Organism=Drosophila melanogaster, GI221476594, Length=134, Percent_Identity=38.8059701492537, Blast_Score=107, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 16976; Mature: 16845

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTTRSAPTLSEAVRHAEARLQLTTPGEGFTEITAEAAAFLGDIAAGAGVLTVFCRHTS
CCCCCCCCCCHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHEEECCC
ASLTIQENADPDVRTDLLSALESLAPRNFGWVHDTEGPDDMPAHVRTLLTDTSLSIPVSQ
CEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
GRMALGTWQGLYLIEHRDRPQRREVVLVFTGTIGHMA
CCEEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure 
ARTTRSAPTLSEAVRHAEARLQLTTPGEGFTEITAEAAAFLGDIAAGAGVLTVFCRHTS
CCCCCCCCCHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHEEECCC
ASLTIQENADPDVRTDLLSALESLAPRNFGWVHDTEGPDDMPAHVRTLLTDTSLSIPVSQ
CEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
GRMALGTWQGLYLIEHRDRPQRREVVLVFTGTIGHMA
CCEEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]