| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is sam [H]
Identifier: 154245335
GI number: 154245335
Start: 1592847
End: 1593860
Strand: Direct
Name: sam [H]
Synonym: Xaut_1388
Alternate gene names: 154245335
Gene position: 1592847-1593860 (Clockwise)
Preceding gene: 154245334
Following gene: 154245346
Centisome position: 30.0
GC content: 70.61
Gene sequence:
>1014_bases ATGAGCCGTCTTCCCCAAGCGGCGCAGCCGGCCGCAGCCGGCCCTGCGGCGGCAAAGCCCGCCATGTCGGCCACGGTGAA GGGGCTGATCGCCATGGCCTTGTCCATGGCGCTCTTCGTCACCAACGATACGTTCCTCAAGCTCTCCATCCGGGAGATCC CGCTCGGCGAGGCGCTCGGCCTGCGCTCGTTCCTGGCCGGCATCGTGCTGTTCGTGCTGATCGTGCGGGGCGGCGACCTC CCCGCCCTGCGCTATGCCTTCCACCCGCGGGTGGTGATGCGCTCCACCCTCGATACGCTGACCACCTTCGTCTATGTGGC GGCGCTGGCGGTGATGGCGATCGCCTCCTCCACCACCATCTACATGGCGACGCCGCTCATCACCACGGCGCTGGCGGTGC CCATGCTGGGCGAGAAGGTGGGCTGGCGCAGCTGGTGCGCCATCGTGGTCGGCTTCTGCGGTGCGGTGATCGTGACCCGG CCGGACCCCTCCACCTTTGAGGCCATCGCCATCCTGCCCCTGCTCGCCGCCCTGTTCGGCGCCATCCGGGACGTGTCGAC GCGCGGCATCGGCCGGGAGATTCCGGGTACGGTGGTGGGCTTTTCCGGCACGCTGGTGCTCTGCGCCACCGCCACGGTCT TCGTGGCCTGGGAAAGCTGGAAGCTGCCGCCGGTGGCGGTCATGGCCTATATCGTCGCCTCGGGCGTGGCCTTTGCCGGC GGAACCCTGTGCCTCGTCTTCGCCTTCCGCAACGCGCCGGTGGCCTCGGTCTCGCCCCTGCGCTACCTGCTGGTGTTCGG GGCGCTGGTGTCAGGCTATTTCGTCTTCGGCGACCTGCCGGATGCCTGGACCACGGTGGGCATGGTGCTGGTGGTGGGCG CGGGCCTCTATGCCGTGCACCGCGAGCATGAGAAGAGCCGTGCCGCACGCCGCGCAGCAGCGGGCGCTTCAGGCCTGGGC GCCGCCGCGCCCGGCTGCCGGCCCGCCGCTGCCTGCGCCCCCGCCCGTGACTGA
Upstream 100 bases:
>100_bases TGAGCCTGCCCCGGGCAGCCGTGCGCCTGCGCGTCGGCGACTGCGTCAATACCGCAACGCCTGTCCTTCCCTTCGCCGCT TGTCCGGTGGAGCGTCGGGC
Downstream 100 bases:
>100_bases CGAACCTGTGGGCGCGGTCCTGACCGATTGAGGCTTGGCCTCCGCCTTCACCCCTGCCTGGGACGGTAGTCGCCGGTGAC CGGGTCGCGCTCCAGCGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSRLPQAAQPAAAGPAAAKPAMSATVKGLIAMALSMALFVTNDTFLKLSIREIPLGEALGLRSFLAGIVLFVLIVRGGDL PALRYAFHPRVVMRSTLDTLTTFVYVAALAVMAIASSTTIYMATPLITTALAVPMLGEKVGWRSWCAIVVGFCGAVIVTR PDPSTFEAIAILPLLAALFGAIRDVSTRGIGREIPGTVVGFSGTLVLCATATVFVAWESWKLPPVAVMAYIVASGVAFAG GTLCLVFAFRNAPVASVSPLRYLLVFGALVSGYFVFGDLPDAWTTVGMVLVVGAGLYAVHREHEKSRAARRAAAGASGLG AAAPGCRPAAACAPARD
Sequences:
>Translated_337_residues MSRLPQAAQPAAAGPAAAKPAMSATVKGLIAMALSMALFVTNDTFLKLSIREIPLGEALGLRSFLAGIVLFVLIVRGGDL PALRYAFHPRVVMRSTLDTLTTFVYVAALAVMAIASSTTIYMATPLITTALAVPMLGEKVGWRSWCAIVVGFCGAVIVTR PDPSTFEAIAILPLLAALFGAIRDVSTRGIGREIPGTVVGFSGTLVLCATATVFVAWESWKLPPVAVMAYIVASGVAFAG GTLCLVFAFRNAPVASVSPLRYLLVFGALVSGYFVFGDLPDAWTTVGMVLVVGAGLYAVHREHEKSRAARRAAAGASGLG AAAPGCRPAAACAPARD >Mature_336_residues SRLPQAAQPAAAGPAAAKPAMSATVKGLIAMALSMALFVTNDTFLKLSIREIPLGEALGLRSFLAGIVLFVLIVRGGDLP ALRYAFHPRVVMRSTLDTLTTFVYVAALAVMAIASSTTIYMATPLITTALAVPMLGEKVGWRSWCAIVVGFCGAVIVTRP DPSTFEAIAILPLLAALFGAIRDVSTRGIGREIPGTVVGFSGTLVLCATATVFVAWESWKLPPVAVMAYIVASGVAFAGG TLCLVFAFRNAPVASVSPLRYLLVFGALVSGYFVFGDLPDAWTTVGMVLVVGAGLYAVHREHEKSRAARRAAAGASGLGA AAPGCRPAAACAPARD
Specific function: Transports S-adenosylmethionine [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 34898; Mature: 34766
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLPQAAQPAAAGPAAAKPAMSATVKGLIAMALSMALFVTNDTFLKLSIREIPLGEALG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCEEEEEEEEECCCCHHHH LRSFLAGIVLFVLIVRGGDLPALRYAFHPRVVMRSTLDTLTTFVYVAALAVMAIASSTTI HHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE YMATPLITTALAVPMLGEKVGWRSWCAIVVGFCGAVIVTRPDPSTFEAIAILPLLAALFG EEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHH AIRDVSTRGIGREIPGTVVGFSGTLVLCATATVFVAWESWKLPPVAVMAYIVASGVAFAG HHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCHHHCC GTLCLVFAFRNAPVASVSPLRYLLVFGALVSGYFVFGDLPDAWTTVGMVLVVGAGLYAVH CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHCCHHHHH REHEKSRAARRAAAGASGLGAAAPGCRPAAACAPARD HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure SRLPQAAQPAAAGPAAAKPAMSATVKGLIAMALSMALFVTNDTFLKLSIREIPLGEALG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCEEEEEEEEECCCCHHHH LRSFLAGIVLFVLIVRGGDLPALRYAFHPRVVMRSTLDTLTTFVYVAALAVMAIASSTTI HHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE YMATPLITTALAVPMLGEKVGWRSWCAIVVGFCGAVIVTRPDPSTFEAIAILPLLAALFG EEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHH AIRDVSTRGIGREIPGTVVGFSGTLVLCATATVFVAWESWKLPPVAVMAYIVASGVAFAG HHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCHHHCC GTLCLVFAFRNAPVASVSPLRYLLVFGALVSGYFVFGDLPDAWTTVGMVLVVGAGLYAVH CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHCCHHHHH REHEKSRAARRAAAGASGLGAAAPGCRPAAACAPARD HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA