| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245332
Identifier: 154245332
GI number: 154245332
Start: 1590006
End: 1590734
Strand: Reverse
Name: 154245332
Synonym: Xaut_1385
Alternate gene names: NA
Gene position: 1590734-1590006 (Counterclockwise)
Preceding gene: 154245333
Following gene: 154245328
Centisome position: 29.96
GC content: 70.37
Gene sequence:
>729_bases ATGCCCGCACCGACACGCCCCTCTTCGCGCGCGCGCCTGATGCACGCCACCGCCCTCATGGTGGCGCTTGCGACTGCCGC CGCGCCACCGGCCGTCGCCGCCCCGCAAAACCAGCATCTCACCGTCGTGGAACTGTTCACCAGCCAGGGCTGCTCCTCCT GCCCGCCGGCGGACGCCAACCTCATCGCCCTCAGCCGGCGGCCGGATGTGCTCGCGCTCAGCTTCAGCGTGACCTATTGG GATCATCTCGGCTGGCGCGACACCTTCGGCAAGCCGGAATTCACGAAGCGCCAGTATGCCTATGAGCCGCAACTGAGCGA GCGCGGTCCGTTCACTCCGCAGATGGTGGTGAACGGCCGCATCAGCCGCGTCGGGTTCAACCTGGCCGAGATCGAGCGGG CCATCTCCGCCGCCCCGCCCTTCAGCGGACCGGACATCACCCTCGGGCCGAGGGAGGTGTCCATCGGCCGGGGAGCGGCG CCTGCCGCGGAGGCCGACATCTGGCTGGTGGCCTATGATCCACACGTGGTGGAGGTGCCGGTGCGGCGCGGCGAGAATTC CGGCCGCACCTTGCCCCACGTGCGCGTTGTCCACCGGCTGGAACGCCTCGGCGGCTGGGATGGCAAGCCCGTCCACATCG CCCGGAGCGAGACGCCGCCGGGCCTGCTCACAGCGGTCCTGGTCCAGCTTCCGTCCGGCGGCCCGATCCTGTCGGCGGCG ACCGAATAA
Upstream 100 bases:
>100_bases GGCGTGAGGGTGTAACCGGGCACAGGCGCCGGCCGAAGCGCTCAAGGAGCGCGTTCGGCCGTGTCGCGGCGAATGGCGCC TCGCTCCGGAGAACCGCCCG
Downstream 100 bases:
>100_bases GTCTCGCGACGGCCGGTGCTTGAAACGGCCGAAGCCGTCCCCAGCGGGAAAGGGGGCCAAGAGGGGGAAAGGGGGCCTGG GGCCCCCCTGCCCTCACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MPAPTRPSSRARLMHATALMVALATAAAPPAVAAPQNQHLTVVELFTSQGCSSCPPADANLIALSRRPDVLALSFSVTYW DHLGWRDTFGKPEFTKRQYAYEPQLSERGPFTPQMVVNGRISRVGFNLAEIERAISAAPPFSGPDITLGPREVSIGRGAA PAAEADIWLVAYDPHVVEVPVRRGENSGRTLPHVRVVHRLERLGGWDGKPVHIARSETPPGLLTAVLVQLPSGGPILSAA TE
Sequences:
>Translated_242_residues MPAPTRPSSRARLMHATALMVALATAAAPPAVAAPQNQHLTVVELFTSQGCSSCPPADANLIALSRRPDVLALSFSVTYW DHLGWRDTFGKPEFTKRQYAYEPQLSERGPFTPQMVVNGRISRVGFNLAEIERAISAAPPFSGPDITLGPREVSIGRGAA PAAEADIWLVAYDPHVVEVPVRRGENSGRTLPHVRVVHRLERLGGWDGKPVHIARSETPPGLLTAVLVQLPSGGPILSAA TE >Mature_241_residues PAPTRPSSRARLMHATALMVALATAAAPPAVAAPQNQHLTVVELFTSQGCSSCPPADANLIALSRRPDVLALSFSVTYWD HLGWRDTFGKPEFTKRQYAYEPQLSERGPFTPQMVVNGRISRVGFNLAEIERAISAAPPFSGPDITLGPREVSIGRGAAP AAEADIWLVAYDPHVVEVPVRRGENSGRTLPHVRVVHRLERLGGWDGKPVHIARSETPPGLLTAVLVQLPSGGPILSAAT E
Specific function: Unknown
COG id: COG5429
COG function: function code S; Uncharacterized secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25953; Mature: 25822
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPTRPSSRARLMHATALMVALATAAAPPAVAAPQNQHLTVVELFTSQGCSSCPPADAN CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHCCCCCCCCCCCC LIALSRRPDVLALSFSVTYWDHLGWRDTFGKPEFTKRQYAYEPQLSERGPFTPQMVVNGR EEEEECCCCEEEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC ISRVGFNLAEIERAISAAPPFSGPDITLGPREVSIGRGAAPAAEADIWLVAYDPHVVEVP HHHHCCCHHHHHHHHHCCCCCCCCCEEECCCEEECCCCCCCCCCCCEEEEEECCEEEEEE VRRGENSGRTLPHVRVVHRLERLGGWDGKPVHIARSETPPGLLTAVLVQLPSGGPILSAA EECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEECCC TE CC >Mature Secondary Structure PAPTRPSSRARLMHATALMVALATAAAPPAVAAPQNQHLTVVELFTSQGCSSCPPADAN CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHCCCCCCCCCCCC LIALSRRPDVLALSFSVTYWDHLGWRDTFGKPEFTKRQYAYEPQLSERGPFTPQMVVNGR EEEEECCCCEEEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC ISRVGFNLAEIERAISAAPPFSGPDITLGPREVSIGRGAAPAAEADIWLVAYDPHVVEVP HHHHCCCHHHHHHHHHCCCCCCCCCEEECCCEEECCCCCCCCCCCCEEEEEECCEEEEEE VRRGENSGRTLPHVRVVHRLERLGGWDGKPVHIARSETPPGLLTAVLVQLPSGGPILSAA EECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEECCC TE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA