| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is nadE [H]
Identifier: 154245324
GI number: 154245324
Start: 1578727
End: 1580436
Strand: Direct
Name: nadE [H]
Synonym: Xaut_1377
Alternate gene names: 154245324
Gene position: 1578727-1580436 (Clockwise)
Preceding gene: 154245323
Following gene: 154245326
Centisome position: 29.74
GC content: 68.19
Gene sequence:
>1710_bases ATGACCACCGTCCTGACCACCGGCATAGCGCCCGGCGCCCCTGAGACCGACGCTCCCGTCGACACCTTGTTCATCGCTGT CGCGCAGCTCAACCCCACCGTGGGCGACGTGGCCGGCAATCTGGACCTTGCCCGCCGCACCAGCGCCGGCGCCCGCGATG CGGGGGCGGACCTCGTGGTCTTTCCCGAGCTGTTCATCGCCGGCTATCCGCCCGAGGACCTGGTGCTGAAGCCGGCGTTC CAGCAGGCCTGCCGCGCCGCCATCGAGACGCTGGCCGCCGAGACCGCTGACGGCCCGGCGCTGCTCATCGGCGCGCCGTG GGTGGAGGAGGGCAAGCTCTACAATTCGGTGCTGCTGCTGGAAAACGGCGGCATCTCCGCCGTTCGCCACAAGGTGGACC TGCCCAATTACGGCGTATTCGACGAGAAGCGCGTGTTCACCCCCGGCCCGCTGCCGGGGCCGATCCCGTTCAAGGGCGTG CGCCTCGGCGTACCGATCTGCGAGGACATCTGGGGTGCGGACGTGGTGGAATGCCTCGCCGAGACTGGCGCGGAGCTGCT CATCGTTCCCAACGGCTCGCCCTATCGCCAGAGCGTCTATGCCGAGCGCGAGAACGTGGCGGTGGCCCGCGTGGTGGAGA GCCACCTGCCGCTGCTCTATGTGAACCAGGTGGGCGGGCAGGACGAGCTGGTATTCGACGGCGCGTCCTTCGCCCTTAAC CCCGACCGCTTCCTGGCCCTGCAGTTTCCCGGCTTCATGGAGCGGGTGCGCATCTCCAAGTGGCAGCGCTTCGAGAACGG CTGGAAGTGCCTCGGCGCCAATCTTGCCGACCGCATCGAGGGCGATGAGGCGGACTATGCCGCCTGCGTGCTGGGCCTGC GCGACTATGTGAACAAGAACCGCTTCCCCGGCGTGGTGCTGGGGCTTTCTGGCGGCATCGACAGCGCCATCTGCGCCGCC ATGGCGGTGGATGCCCTGGGGCCGGAGCGGGTCCACTGCATCATGCTGCCCTATCGTTACACGTCCGAGGAAAGCCTCGC GGATGCCGCCGCCGTGGCGCAGGCCCTGTTCGTGCGCTACGACGTGCTGCCCATCGTTGCCGGGGTGGAGGGCATGGAAG CCGCGCTGGCGCCCCTGTTCGAGGGCACCCAGCGCGACGTGACCGAGGAAAACCTCCAGTCCCGCGTGCGCGGCGCGCTG CTCATGTCGGTGTCCAACAAGTTCGGCGCCATGGTGGTGACCACCGGCAACAAGTCCGAGATGTCCACCGGCTACGCCAC CCTCTATGGCGACATGAACGGCGGCTACAATCCCATCAAGGACCTCTACAAGACCCAGGTCACCCGCCTGTCGCGCCTGC GCAACCGCTGGAAGCCGGCCGACGCGCTCGGGCCGGACGGCGTCGTCATCCCCGACAGCCTCATCGACAAGCCGCCCACC GCCGAATTGCGCGAGAACCAGAAGGACGAGGATTCGCTGCCGCCCTACGCGGTGCTGGACGCCATCCTCGAACGCCTGGT GGAGCGCGAGCATTCGGTGGCGCAGATCATCGCCGACGGCTTCAACGCTGCCACCGTGACGCGGGTGGAGCGGCTTTTGA ACATCGCCGAATACAAGCGCCGGCAGGCCGCGCCGGGGGTGAAGGTGACCGGCCGCAACTTCGGCCGCGACCGCCGCTAT CCCATCACCAACCGCTTCCGCGAGGGGTGA
Upstream 100 bases:
>100_bases AGCCCCTCCGGGGTGCCGCGATGGCGCCGGATGAGGCAGATTTCGCACCTGCCCTTTTCTTGCCCTTTCCCCCCTTCGCC GCTGGGGTTAAATCCGATTC
Downstream 100 bases:
>100_bases GGCGATAAGAACGCGTTTGGAAATTCAGAAGGGCATAACCGCAAACACCATCGTCATGCCCTGGCTTGTCGCACGCATCC AAGCCGAACCGCTTGGGACG
Product: NAD synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolyzing] [H]
Number of amino acids: Translated: 569; Mature: 568
Protein sequence:
>569_residues MTTVLTTGIAPGAPETDAPVDTLFIAVAQLNPTVGDVAGNLDLARRTSAGARDAGADLVVFPELFIAGYPPEDLVLKPAF QQACRAAIETLAAETADGPALLIGAPWVEEGKLYNSVLLLENGGISAVRHKVDLPNYGVFDEKRVFTPGPLPGPIPFKGV RLGVPICEDIWGADVVECLAETGAELLIVPNGSPYRQSVYAERENVAVARVVESHLPLLYVNQVGGQDELVFDGASFALN PDRFLALQFPGFMERVRISKWQRFENGWKCLGANLADRIEGDEADYAACVLGLRDYVNKNRFPGVVLGLSGGIDSAICAA MAVDALGPERVHCIMLPYRYTSEESLADAAAVAQALFVRYDVLPIVAGVEGMEAALAPLFEGTQRDVTEENLQSRVRGAL LMSVSNKFGAMVVTTGNKSEMSTGYATLYGDMNGGYNPIKDLYKTQVTRLSRLRNRWKPADALGPDGVVIPDSLIDKPPT AELRENQKDEDSLPPYAVLDAILERLVEREHSVAQIIADGFNAATVTRVERLLNIAEYKRRQAAPGVKVTGRNFGRDRRY PITNRFREG
Sequences:
>Translated_569_residues MTTVLTTGIAPGAPETDAPVDTLFIAVAQLNPTVGDVAGNLDLARRTSAGARDAGADLVVFPELFIAGYPPEDLVLKPAF QQACRAAIETLAAETADGPALLIGAPWVEEGKLYNSVLLLENGGISAVRHKVDLPNYGVFDEKRVFTPGPLPGPIPFKGV RLGVPICEDIWGADVVECLAETGAELLIVPNGSPYRQSVYAERENVAVARVVESHLPLLYVNQVGGQDELVFDGASFALN PDRFLALQFPGFMERVRISKWQRFENGWKCLGANLADRIEGDEADYAACVLGLRDYVNKNRFPGVVLGLSGGIDSAICAA MAVDALGPERVHCIMLPYRYTSEESLADAAAVAQALFVRYDVLPIVAGVEGMEAALAPLFEGTQRDVTEENLQSRVRGAL LMSVSNKFGAMVVTTGNKSEMSTGYATLYGDMNGGYNPIKDLYKTQVTRLSRLRNRWKPADALGPDGVVIPDSLIDKPPT AELRENQKDEDSLPPYAVLDAILERLVEREHSVAQIIADGFNAATVTRVERLLNIAEYKRRQAAPGVKVTGRNFGRDRRY PITNRFREG >Mature_568_residues TTVLTTGIAPGAPETDAPVDTLFIAVAQLNPTVGDVAGNLDLARRTSAGARDAGADLVVFPELFIAGYPPEDLVLKPAFQ QACRAAIETLAAETADGPALLIGAPWVEEGKLYNSVLLLENGGISAVRHKVDLPNYGVFDEKRVFTPGPLPGPIPFKGVR LGVPICEDIWGADVVECLAETGAELLIVPNGSPYRQSVYAERENVAVARVVESHLPLLYVNQVGGQDELVFDGASFALNP DRFLALQFPGFMERVRISKWQRFENGWKCLGANLADRIEGDEADYAACVLGLRDYVNKNRFPGVVLGLSGGIDSAICAAM AVDALGPERVHCIMLPYRYTSEESLADAAAVAQALFVRYDVLPIVAGVEGMEAALAPLFEGTQRDVTEENLQSRVRGALL MSVSNKFGAMVVTTGNKSEMSTGYATLYGDMNGGYNPIKDLYKTQVTRLSRLRNRWKPADALGPDGVVIPDSLIDKPPTA ELRENQKDEDSLPPYAVLDAILERLVEREHSVAQIIADGFNAATVTRVERLLNIAEYKRRQAAPGVKVTGRNFGRDRRYP ITNRFREG
Specific function: It is not known if this NAD synthase uses NH(3) or glutamine as the N donor [H]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: 100 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 61659; Mature: 61528
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00920 NITRIL_CHT_1 ; PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVLTTGIAPGAPETDAPVDTLFIAVAQLNPTVGDVAGNLDLARRTSAGARDAGADLVV CCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCHHHHHCCCCCCCCCCCEEE FPELFIAGYPPEDLVLKPAFQQACRAAIETLAAETADGPALLIGAPWVEEGKLYNSVLLL ECHHHHCCCCCHHCEECHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEEE ENGGISAVRHKVDLPNYGVFDEKRVFTPGPLPGPIPFKGVRLGVPICEDIWGADVVECLA ECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHCCHHHHHHHH ETGAELLIVPNGSPYRQSVYAERENVAVARVVESHLPLLYVNQVGGQDELVFDGASFALN HCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEECCCCEEEC PDRFLALQFPGFMERVRISKWQRFENGWKCLGANLADRIEGDEADYAACVLGLRDYVNKN CCCEEEEECCCHHHHHHHHHHHHHHCCHHEECCCHHHHCCCCCCHHHHHHHHHHHHHCCC RFPGVVLGLSGGIDSAICAAMAVDALGPERVHCIMLPYRYTSEESLADAAAVAQALFVRY CCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH DVLPIVAGVEGMEAALAPLFEGTQRDVTEENLQSRVRGALLMSVSNKFGAMVVTTGNKSE HHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCC MSTGYATLYGDMNGGYNPIKDLYKTQVTRLSRLRNRWKPADALGPDGVVIPDSLIDKPPT CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCHHHCCCCCC AELRENQKDEDSLPPYAVLDAILERLVEREHSVAQIIADGFNAATVTRVERLLNIAEYKR HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RQAAPGVKVTGRNFGRDRRYPITNRFREG HHCCCCCEEECCCCCCCCCCCHHHHCCCC >Mature Secondary Structure TTVLTTGIAPGAPETDAPVDTLFIAVAQLNPTVGDVAGNLDLARRTSAGARDAGADLVV CEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCHHHHHCCCCCCCCCCCEEE FPELFIAGYPPEDLVLKPAFQQACRAAIETLAAETADGPALLIGAPWVEEGKLYNSVLLL ECHHHHCCCCCHHCEECHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEEE ENGGISAVRHKVDLPNYGVFDEKRVFTPGPLPGPIPFKGVRLGVPICEDIWGADVVECLA ECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHCCHHHHHHHH ETGAELLIVPNGSPYRQSVYAERENVAVARVVESHLPLLYVNQVGGQDELVFDGASFALN HCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEECCCCEEEC PDRFLALQFPGFMERVRISKWQRFENGWKCLGANLADRIEGDEADYAACVLGLRDYVNKN CCCEEEEECCCHHHHHHHHHHHHHHCCHHEECCCHHHHCCCCCCHHHHHHHHHHHHHCCC RFPGVVLGLSGGIDSAICAAMAVDALGPERVHCIMLPYRYTSEESLADAAAVAQALFVRY CCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH DVLPIVAGVEGMEAALAPLFEGTQRDVTEENLQSRVRGALLMSVSNKFGAMVVTTGNKSE HHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEECCCCCEEEEEECCCCC MSTGYATLYGDMNGGYNPIKDLYKTQVTRLSRLRNRWKPADALGPDGVVIPDSLIDKPPT CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCHHHCCCCCC AELRENQKDEDSLPPYAVLDAILERLVEREHSVAQIIADGFNAATVTRVERLLNIAEYKR HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RQAAPGVKVTGRNFGRDRRYPITNRFREG HHCCCCCEEECCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8431308; 8195100 [H]