| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245291
Identifier: 154245291
GI number: 154245291
Start: 1545068
End: 1545952
Strand: Direct
Name: 154245291
Synonym: Xaut_1344
Alternate gene names: NA
Gene position: 1545068-1545952 (Clockwise)
Preceding gene: 154245290
Following gene: 154245296
Centisome position: 29.1
GC content: 64.75
Gene sequence:
>885_bases ATGATCCGTTCGTTCAAGGACATCGTCCTCGCCATAGTCTGCGCCCTATTTGCCGGCTCGTCCGCCTGGGCTGCCGACGT GAATTCCGGCGACTATCTGCCGGCGCCCGCCGGCACCAACCTGCTGGTCTTCTACAGCCAGTATGCGACCCGCGACGAAT ATGTCACCGCCTCGGGACAGACCATCTCCAACGGCACCGGCCTTGATTCCTACGTCAACATCCTGCGCTACGTGCATTAC TTCGACATCGGCGGCTTCACGGTGGCGCCGCAGGTGCTCATTCCGGCCGGCACGCTCTACAACGGCCGGCTCGGCGGCGC CTCGTTCGATGCCGCGGCGGGCCTCGGCGATCCCATCCTCGCGACCACGGTCTGGGTGGTGAACAACAAGGCGAGCCAGA CCTATATCGGCATCATGCCCTATCTGTTCCTGCCCGTCGGCCAGTACAGCGCAGGCGAGGTGCTGAACCTGGGCGAGAAC CGCTGGAAGCTGGATCTCCAGGCCGGTTGGTATCAGGGCCTCACCAACGGCGTCGCGCTCCAGCTCACCGGCGACGTGAT CTGGTATGGCGACAATGGGAGGGCCGGCAACGGCACGCAGACCCTGTCGCAAGACCCCACCTATCAGCTCCAGGCCTGGC TCTCCTACGCCTTCGCCCCCACCTGGTCGGCGGCGGTCGGCTATTCCCAGTTCTGGGGCGGCACCGAATATCTGGCCGGT GTGCCCACCGGGAATGAGACCGAACGCTCGCAGGTGCGGCTCGAGCTGTCCAAGTTCATCACGCCGACATTCCAGGTGCT GGGGTTGGTCCAGCGGGATGTCGCCACCTCGGGAGGCTTTCCCGAAGCGTTCCGCGGCACGGTTCGCCTGCTGCAGGTCT TTTAG
Upstream 100 bases:
>100_bases CGGCCGGGGCAGGCAGAGCCATGTCCGTGCGCCAGCGGGGCGCGCGGACCAGCGCGGCGCGCCAACGCCGTCCATCACCC AAGATCAATCCGGAGGAAAC
Downstream 100 bases:
>100_bases GCGGGGCGATGCTCCGCAGGAGGTTTGCCCCAGAGTTGGAGTCTTGGACTTGGAGTCTCAGACTTGGAGTCTCAGACTTG GAGTCTCAGACTTGGAGCCT
Product: putative signal peptide
Products: NA
Alternate protein names: Phenol Degradation; Quinohemoprotein Alcohol Dehydrogenase; Alcohol Dehydrogenase; Meta-Pathway Phenol Degradation-Like Protein; QbdB Protein; Signal Peptide-Containing Protein
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MIRSFKDIVLAIVCALFAGSSAWAADVNSGDYLPAPAGTNLLVFYSQYATRDEYVTASGQTISNGTGLDSYVNILRYVHY FDIGGFTVAPQVLIPAGTLYNGRLGGASFDAAAGLGDPILATTVWVVNNKASQTYIGIMPYLFLPVGQYSAGEVLNLGEN RWKLDLQAGWYQGLTNGVALQLTGDVIWYGDNGRAGNGTQTLSQDPTYQLQAWLSYAFAPTWSAAVGYSQFWGGTEYLAG VPTGNETERSQVRLELSKFITPTFQVLGLVQRDVATSGGFPEAFRGTVRLLQVF
Sequences:
>Translated_294_residues MIRSFKDIVLAIVCALFAGSSAWAADVNSGDYLPAPAGTNLLVFYSQYATRDEYVTASGQTISNGTGLDSYVNILRYVHY FDIGGFTVAPQVLIPAGTLYNGRLGGASFDAAAGLGDPILATTVWVVNNKASQTYIGIMPYLFLPVGQYSAGEVLNLGEN RWKLDLQAGWYQGLTNGVALQLTGDVIWYGDNGRAGNGTQTLSQDPTYQLQAWLSYAFAPTWSAAVGYSQFWGGTEYLAG VPTGNETERSQVRLELSKFITPTFQVLGLVQRDVATSGGFPEAFRGTVRLLQVF >Mature_294_residues MIRSFKDIVLAIVCALFAGSSAWAADVNSGDYLPAPAGTNLLVFYSQYATRDEYVTASGQTISNGTGLDSYVNILRYVHY FDIGGFTVAPQVLIPAGTLYNGRLGGASFDAAAGLGDPILATTVWVVNNKASQTYIGIMPYLFLPVGQYSAGEVLNLGEN RWKLDLQAGWYQGLTNGVALQLTGDVIWYGDNGRAGNGTQTLSQDPTYQLQAWLSYAFAPTWSAAVGYSQFWGGTEYLAG VPTGNETERSQVRLELSKFITPTFQVLGLVQRDVATSGGFPEAFRGTVRLLQVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31699; Mature: 31699
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRSFKDIVLAIVCALFAGSSAWAADVNSGDYLPAPAGTNLLVFYSQYATRDEYVTASGQ CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCEEEEEEECCCCCCCEEEECCC TISNGTGLDSYVNILRYVHYFDIGGFTVAPQVLIPAGTLYNGRLGGASFDAAAGLGDPIL EECCCCCHHHHHHHHHHHHHHCCCCEEECCEEEECCCCEECCCCCCCCCCHHCCCCCCHH ATTVWVVNNKASQTYIGIMPYLFLPVGQYSAGEVLNLGENRWKLDLQAGWYQGLTNGVAL HEEEEEEECCCCCEEEEEHHHHHEECCCCCCCCEEECCCCEEEEEECCCHHHHCCCCEEE QLTGDVIWYGDNGRAGNGTQTLSQDPTYQLQAWLSYAFAPTWSAAVGYSQFWGGTEYLAG EEECCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCHHHHCCCCCEEEE VPTGNETERSQVRLELSKFITPTFQVLGLVQRDVATSGGFPEAFRGTVRLLQVF CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MIRSFKDIVLAIVCALFAGSSAWAADVNSGDYLPAPAGTNLLVFYSQYATRDEYVTASGQ CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCEEEEEEECCCCCCCEEEECCC TISNGTGLDSYVNILRYVHYFDIGGFTVAPQVLIPAGTLYNGRLGGASFDAAAGLGDPIL EECCCCCHHHHHHHHHHHHHHCCCCEEECCEEEECCCCEECCCCCCCCCCHHCCCCCCHH ATTVWVVNNKASQTYIGIMPYLFLPVGQYSAGEVLNLGENRWKLDLQAGWYQGLTNGVAL HEEEEEEECCCCCEEEEEHHHHHEECCCCCCCCEEECCCCEEEEEECCCHHHHCCCCEEE QLTGDVIWYGDNGRAGNGTQTLSQDPTYQLQAWLSYAFAPTWSAAVGYSQFWGGTEYLAG EEECCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCHHHHCCCCCEEEE VPTGNETERSQVRLELSKFITPTFQVLGLVQRDVATSGGFPEAFRGTVRLLQVF CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA