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The map label for this gene is yjiA [H]

Identifier: 154245284

GI number: 154245284

Start: 1532972

End: 1534195

Strand: Reverse

Name: yjiA [H]

Synonym: Xaut_1336

Alternate gene names: 154245284

Gene position: 1534195-1532972 (Counterclockwise)

Preceding gene: 154245292

Following gene: 154245282

Centisome position: 28.9

GC content: 70.18

Gene sequence:

>1224_bases
ATGACCGAACACGATCCTACCGATCCGCCCATCGACCCGCGCATCCCCGTCACCGTGCTCACCGGCTTCCTCGGCGCCGG
CAAGACCACGCTGCTCAACCGCCTCGTCACCCATCCGGACATGGCCGGCACCGCGCTGCTCATCAACGAATTCGGCGCCG
TGGGTATCGACCACCAGCTGGTGGAGCAGGTCGGCGAGACCATGGTGCTGCTCGAGTCCGGATGCGTGTGCTGCACCGTA
CGCGGCGATCTCGTGGCGGCTCTCGAAACGCTCCATGACAAGCTCGCGCGGCGGCAGATCCCGCAGGTGCGCCGCGTGGT
GATCGAGACCACCGGCCTTGCCGATCCCATACCGGTGGTCTGGACCCTGATGGAGCAGCGCTACGTCGCCGCCCGCTTCC
GCTGCGACGGCGTCGTCACGCTGGTGGACACCGGCCTTGGCGCCGAGCAACTGGACCGGAACGAGGAGGCGCGCCGCCAG
GTGGGCATGGCCGACCGCATCCTCCTCACCAAGGCGGACCTTGCCGATCGTAGCGCCCGCGAGCAGCTCGATGCCCGGCT
CGACGTGCTCAATCCGTCGGCTCCGCGCCTTGTCGTGACCCATGGCGAGATCGAGCCCCGGCGCATCCTGGGCGCCGGAC
TTTATGCGCCGGGCAGCCTGCCGGCGGAGGTGGAGCGCTTTGTGGCCGAGACGGAAGCCGCCGCCCGCGCCGGCGAGGCC
CCGCCCTCCGCCCACGGGGCACAGGCGCTGCCGGTGAGCTTCACCTGCTTCTTCAACCATCAGGTGCCCTGGCGCGGCTT
CGCGGTGGCCATGGGAGAGATTCTCGCCAAATACGGATCGCACCTGCTGCGGGTAAAGGGGCTGATGAACGTGGCCGGCC
TCGGCGCACCGGTGGTGGTGCAGTGCGTGGAACAGGTCGCCTATCCCCCGGTGCGCCTGCCGCGCTGGCCGAAGGAGGGC
ACGCGCTTCGACATGCGGGGACGACTCGTGTTCATCGTCCGTAACCTGCCGGAGGCAGCCATCGACGACATCCGCCGCCG
CCTCGCCGACCTGCCCGGTGACGCTGTCGCCCTGCGGGCGGCCGCAACCGCTCCCCTGCTGCCGACGCGCTGCTGGCTCA
GTGCCCGCATGCCGGTGCAGGGCCGCAGCAGCTTCGAGACCGACGCCTGGCACATCAATTCCGTGAGGCTGGGCAAGGGC
CGGCCCGCCGCTGCCGCCTCGTGA

Upstream 100 bases:

>100_bases
CCCGCTTGGGACACCACGGGCAGGCTTTGCCCCGGTGGCACGGGCGTTGCTGCGCTCCCGCGACATCCCAGCGCTGCCGG
CGCCCGCTGCGAGACCGCCC

Downstream 100 bases:

>100_bases
AGCCGCGCGGCGACACCGCCGCGCGGCCTCGCCTCACTTCACCGGCTCAAGCACGCTCACATAGTTCGCCACCGCTGAGC
CACCCATGTTGAACACCCCG

Product: cobalamin synthesis protein P47K

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MTEHDPTDPPIDPRIPVTVLTGFLGAGKTTLLNRLVTHPDMAGTALLINEFGAVGIDHQLVEQVGETMVLLESGCVCCTV
RGDLVAALETLHDKLARRQIPQVRRVVIETTGLADPIPVVWTLMEQRYVAARFRCDGVVTLVDTGLGAEQLDRNEEARRQ
VGMADRILLTKADLADRSAREQLDARLDVLNPSAPRLVVTHGEIEPRRILGAGLYAPGSLPAEVERFVAETEAAARAGEA
PPSAHGAQALPVSFTCFFNHQVPWRGFAVAMGEILAKYGSHLLRVKGLMNVAGLGAPVVVQCVEQVAYPPVRLPRWPKEG
TRFDMRGRLVFIVRNLPEAAIDDIRRRLADLPGDAVALRAAATAPLLPTRCWLSARMPVQGRSSFETDAWHINSVRLGKG
RPAAAAS

Sequences:

>Translated_407_residues
MTEHDPTDPPIDPRIPVTVLTGFLGAGKTTLLNRLVTHPDMAGTALLINEFGAVGIDHQLVEQVGETMVLLESGCVCCTV
RGDLVAALETLHDKLARRQIPQVRRVVIETTGLADPIPVVWTLMEQRYVAARFRCDGVVTLVDTGLGAEQLDRNEEARRQ
VGMADRILLTKADLADRSAREQLDARLDVLNPSAPRLVVTHGEIEPRRILGAGLYAPGSLPAEVERFVAETEAAARAGEA
PPSAHGAQALPVSFTCFFNHQVPWRGFAVAMGEILAKYGSHLLRVKGLMNVAGLGAPVVVQCVEQVAYPPVRLPRWPKEG
TRFDMRGRLVFIVRNLPEAAIDDIRRRLADLPGDAVALRAAATAPLLPTRCWLSARMPVQGRSSFETDAWHINSVRLGKG
RPAAAAS
>Mature_406_residues
TEHDPTDPPIDPRIPVTVLTGFLGAGKTTLLNRLVTHPDMAGTALLINEFGAVGIDHQLVEQVGETMVLLESGCVCCTVR
GDLVAALETLHDKLARRQIPQVRRVVIETTGLADPIPVVWTLMEQRYVAARFRCDGVVTLVDTGLGAEQLDRNEEARRQV
GMADRILLTKADLADRSAREQLDARLDVLNPSAPRLVVTHGEIEPRRILGAGLYAPGSLPAEVERFVAETEAAARAGEAP
PSAHGAQALPVSFTCFFNHQVPWRGFAVAMGEILAKYGSHLLRVKGLMNVAGLGAPVVVQCVEQVAYPPVRLPRWPKEGT
RFDMRGRLVFIVRNLPEAAIDDIRRRLADLPGDAVALRAAATAPLLPTRCWLSARMPVQGRSSFETDAWHINSVRLGKGR
PAAAAS

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI33469141, Length=361, Percent_Identity=28.5318559556787, Blast_Score=112, Evalue=9e-25,
Organism=Homo sapiens, GI223941779, Length=347, Percent_Identity=28.5302593659942, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI126722884, Length=361, Percent_Identity=28.2548476454294, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI148727351, Length=361, Percent_Identity=28.2548476454294, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI146231952, Length=357, Percent_Identity=28.0112044817927, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI223941776, Length=350, Percent_Identity=27.1428571428571, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI119120938, Length=347, Percent_Identity=26.2247838616715, Blast_Score=89, Evalue=5e-18,
Organism=Escherichia coli, GI87082430, Length=330, Percent_Identity=35.1515151515151, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1788499, Length=159, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6324356, Length=233, Percent_Identity=26.6094420600858, Blast_Score=89, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 44149; Mature: 44017

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEHDPTDPPIDPRIPVTVLTGFLGAGKTTLLNRLVTHPDMAGTALLINEFGAVGIDHQL
CCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHEEHHCCCCCCCHHH
VEQVGETMVLLESGCVCCTVRGDLVAALETLHDKLARRQIPQVRRVVIETTGLADPIPVV
HHHHHHEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
WTLMEQRYVAARFRCDGVVTLVDTGLGAEQLDRNEEARRQVGMADRILLTKADLADRSAR
HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCHHHHHHCCCHHHEEEEECHHHHHHHH
EQLDARLDVLNPSAPRLVVTHGEIEPRRILGAGLYAPGSLPAEVERFVAETEAAARAGEA
HHHHHHHHCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PPSAHGAQALPVSFTCFFNHQVPWRGFAVAMGEILAKYGSHLLRVKGLMNVAGLGAPVVV
CCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QCVEQVAYPPVRLPRWPKEGTRFDMRGRLVFIVRNLPEAAIDDIRRRLADLPGDAVALRA
HHHHHHCCCCCCCCCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEHH
AATAPLLPTRCWLSARMPVQGRSSFETDAWHINSVRLGKGRPAAAAS
HCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEECEEEECCCCCCCCCC
>Mature Secondary Structure 
TEHDPTDPPIDPRIPVTVLTGFLGAGKTTLLNRLVTHPDMAGTALLINEFGAVGIDHQL
CCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHEEHHCCCCCCCHHH
VEQVGETMVLLESGCVCCTVRGDLVAALETLHDKLARRQIPQVRRVVIETTGLADPIPVV
HHHHHHEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
WTLMEQRYVAARFRCDGVVTLVDTGLGAEQLDRNEEARRQVGMADRILLTKADLADRSAR
HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCHHHHHHCCCHHHEEEEECHHHHHHHH
EQLDARLDVLNPSAPRLVVTHGEIEPRRILGAGLYAPGSLPAEVERFVAETEAAARAGEA
HHHHHHHHCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PPSAHGAQALPVSFTCFFNHQVPWRGFAVAMGEILAKYGSHLLRVKGLMNVAGLGAPVVV
CCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QCVEQVAYPPVRLPRWPKEGTRFDMRGRLVFIVRNLPEAAIDDIRRRLADLPGDAVALRA
HHHHHHCCCCCCCCCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEHH
AATAPLLPTRCWLSARMPVQGRSSFETDAWHINSVRLGKGRPAAAAS
HCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEECEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]